RNA–Protein interactions for RNA: ENST00000436441.5

SETX-202, Transcript of senataxin, humanhuman

APPRIS ALT2 TSL 5

Gene SETX, Length 5,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETX-202ENST00000436441 DCAF8L2P0C7V8 631 aa16.5■□□□□ 0.23
SETX-202ENST00000436441 SUPT5HO00267 1087 aaKnown RBP15.91■□□□□ 0.14
SETX-202ENST00000436441 PELP1Q8IZL8 1130 aaKnown RBP15.65■□□□□ 0.1
SETX-202ENST00000436441 SHROOM4Q9ULL8 1493 aa15.52■□□□□ 0.07
SETX-202ENST00000436441 NISCHQ9Y2I1 1504 aa15.5■□□□□ 0.07
SETX-202ENST00000436441 EHMT2Q96KQ7 1210 aa15.46■□□□□ 0.07
SETX-202ENST00000436441 APLP2Q06481 763 aa15.23■□□□□ 0.03
SETX-202ENST00000436441 PCGF6Q9BYE7 350 aa15.13■□□□□ 0.01
SETX-202ENST00000436441 CENPBP07199 599 aaPredicted RBP15.06■□□□□ 0
SETX-202ENST00000436441 FAM9AQ8IZU1 332 aaPredicted RBP15.03■□□□□ -0
SETX-202ENST00000436441 ERICH6Q7L0X2 663 aa15.02□□□□□ -0.01
SETX-202ENST00000436441 TTBK1Q5TCY1 1321 aaPredicted RBP15□□□□□ -0.01
SETX-202ENST00000436441 ZEB1P37275 1124 aaPredicted RBP14.97□□□□□ -0.01
SETX-202ENST00000436441 CCER1Q8TC90 406 aaPredicted RBP14.93□□□□□ -0.02
SETX-202ENST00000436441 MYT1Q01538 1121 aa14.81□□□□□ -0.04
SETX-202ENST00000436441 TRIM41Q8WV44 630 aa14.72□□□□□ -0.05
SETX-202ENST00000436441 RANGAP1P46060 587 aaPredicted RBP14.71□□□□□ -0.05
SETX-202ENST00000436441 NEFLP07196 543 aa14.69□□□□□ -0.06
SETX-202ENST00000436441 YTHDC1Q96MU7 727 aaKnown RBP14.67□□□□□ -0.06
SETX-202ENST00000436441 ATP1B4Q9UN42 357 aaPredicted RBP14.58□□□□□ -0.08
SETX-202ENST00000436441 UBTFP17480 764 aaKnown RBP14.56□□□□□ -0.08
SETX-202ENST00000436441 TRIM26Q12899 539 aaPredicted RBP14.44□□□□□ -0.1
SETX-202ENST00000436441 HRCP23327 699 aa14.41□□□□□ -0.1
SETX-202ENST00000436441 PPARGC1BQ86YN6 1023 aaKnown RBP14.4□□□□□ -0.1
SETX-202ENST00000436441 DAXXQ9UER7 740 aaPredicted RBP14.29□□□□□ -0.12
SETX-202ENST00000436441 ITGAEP38570 1179 aa14.16□□□□□ -0.14
SETX-202ENST00000436441 POLR3GLQ9BT43 218 aa14.15□□□□□ -0.14
SETX-202ENST00000436441 LOC105371045A0A1W2PR82 267 aa14.12□□□□□ -0.15
SETX-202ENST00000436441 HNRNPUL2Q1KMD3 747 aaKnown RBP14.1□□□□□ -0.15
SETX-202ENST00000436441 CHIC1Q5VXU3 224 aa14.07□□□□□ -0.16
SETX-202ENST00000436441 RTL5Q5HYW3 569 aaPredicted RBP14.04□□□□□ -0.16
SETX-202ENST00000436441 DIEXFQ68CQ4 756 aaKnown RBP14.04□□□□□ -0.16
SETX-202ENST00000436441 CNGB1Q14028 1251 aaPredicted RBP14.01□□□□□ -0.17
SETX-202ENST00000436441 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.99□□□□□ -0.17
SETX-202ENST00000436441 ZNF316A6NFI3 1004 aaPredicted RBP13.97□□□□□ -0.17
SETX-202ENST00000436441 MYT1LQ9UL68 1186 aa13.96□□□□□ -0.17
SETX-202ENST00000436441 CLSPNQ9HAW4 1339 aa13.9□□□□□ -0.18
SETX-202ENST00000436441 GTF3C3Q9Y5Q9 886 aa13.86□□□□□ -0.19
SETX-202ENST00000436441 BCANQ96GW7 911 aa13.82□□□□□ -0.2
SETX-202ENST00000436441 SLC4A1APQ9BWU0 796 aaKnown RBP13.82□□□□□ -0.2
SETX-202ENST00000436441 FAM50AQ14320 339 aaKnown RBP13.77□□□□□ -0.2
SETX-202ENST00000436441 CDK11AQ9UQ88 783 aaPredicted RBP13.75□□□□□ -0.21
SETX-202ENST00000436441 NEUROD1Q13562 356 aa13.73□□□□□ -0.21
SETX-202ENST00000436441 ANP32CO43423 234 aa13.72□□□□□ -0.21
SETX-202ENST00000436441 TRIM52Q96A61 297 aa13.71□□□□□ -0.21
SETX-202ENST00000436441 ACIN1Q9UKV3 1341 aaKnown RBP13.64□□□□□ -0.23
SETX-202ENST00000436441 ZNF326Q5BKZ1 582 aaKnown RBP13.58□□□□□ -0.24
SETX-202ENST00000436441 ZBTB47Q9UFB7 747 aaPredicted RBP13.57□□□□□ -0.24
SETX-202ENST00000436441 ANP32AP39687 249 aaKnown RBP13.55□□□□□ -0.24
SETX-202ENST00000436441 CANXP27824 592 aaKnown RBP13.52□□□□□ -0.24
SETX-202ENST00000436441 NPM2Q86SE8 214 aaKnown RBP13.44□□□□□ -0.26
SETX-202ENST00000436441 BCL11AQ9H165 835 aa13.42□□□□□ -0.26
SETX-202ENST00000436441 FKBP8Q14318 412 aa13.4□□□□□ -0.26
SETX-202ENST00000436441 NEFMP07197 916 aa13.38□□□□□ -0.27
SETX-202ENST00000436441 EIF5BO60841 1220 aaKnown RBP13.37□□□□□ -0.27
SETX-202ENST00000436441 SLC24A1O60721 1099 aa13.34□□□□□ -0.27
SETX-202ENST00000436441 PABPN1Q86U42 306 aaKnown RBP eCLIP13.33□□□□□ -0.27
SETX-202ENST00000436441 ANP32BQ92688 251 aaKnown RBP13.33□□□□□ -0.28
SETX-202ENST00000436441 CSRNP3Q8WYN3 585 aa13.31□□□□□ -0.28
SETX-202ENST00000436441 HNRNPUQ00839 825 aaKnown RBP eCLIP13.3□□□□□ -0.28
SETX-202ENST00000436441 P3H3Q8IVL6 736 aa13.29□□□□□ -0.28
SETX-202ENST00000436441 TONSLQ96HA7 1378 aa13.27□□□□□ -0.29
SETX-202ENST00000436441 HSP90AA1P07900 732 aaKnown RBP13.26□□□□□ -0.29
SETX-202ENST00000436441 UPF2Q9HAU5 1272 aaKnown RBP13.26□□□□□ -0.29
SETX-202ENST00000436441 DCAF1Q9Y4B6 1507 aa13.26□□□□□ -0.29
SETX-202ENST00000436441 FBLN2P98095 1184 aa13.25□□□□□ -0.29
SETX-202ENST00000436441 ABCC9O60706 1549 aa13.25□□□□□ -0.29
SETX-202ENST00000436441 ARID3CA6NKF2 412 aa13.24□□□□□ -0.29
SETX-202ENST00000436441 GLIPR1L2Q4G1C9 344 aa13.24□□□□□ -0.29
SETX-202ENST00000436441 DDX10Q13206 875 aaKnown RBP13.23□□□□□ -0.29
SETX-202ENST00000436441 FAM9BQ8IZU0 186 aa13.23□□□□□ -0.29
SETX-202ENST00000436441 ZNF777Q9ULD5 760 aaPredicted RBP13.22□□□□□ -0.29
SETX-202ENST00000436441 NBR1Q14596 966 aa13.21□□□□□ -0.29
SETX-202ENST00000436441 CCDC136Q96JN2 1154 aa13.19□□□□□ -0.3
SETX-202ENST00000436441 SCAF1Q9H7N4 1312 aaKnown RBP13.18□□□□□ -0.3
SETX-202ENST00000436441 SALL2Q9Y467 1007 aaPredicted RBP13.14□□□□□ -0.31
SETX-202ENST00000436441 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.12□□□□□ -0.31
SETX-202ENST00000436441 TMC1Q8TDI8 760 aa13.12□□□□□ -0.31
SETX-202ENST00000436441 ARXQ96QS3 562 aa13.1□□□□□ -0.31
SETX-202ENST00000436441 MIER1Q8N108 512 aa13.09□□□□□ -0.31
SETX-202ENST00000436441 MRS2Q9HD23 443 aa13.09□□□□□ -0.31
SETX-202ENST00000436441 IRX6P78412 446 aaPredicted RBP13.06□□□□□ -0.32
SETX-202ENST00000436441 WDR43Q15061 677 aaKnown RBP eCLIP13.05□□□□□ -0.32
SETX-202ENST00000436441 CHGAP10645 457 aaKnown RBP13.05□□□□□ -0.32
SETX-202ENST00000436441 CHIC2Q9UKJ5 165 aa13.01□□□□□ -0.33
SETX-202ENST00000436441 DDRGK1Q96HY6 314 aa12.99□□□□□ -0.33
SETX-202ENST00000436441 STAG3Q9UJ98 1225 aa12.99□□□□□ -0.33
SETX-202ENST00000436441 ESF1Q9H501 851 aaKnown RBP12.97□□□□□ -0.33
SETX-202ENST00000436441 BECN1Q14457 450 aa12.96□□□□□ -0.34
SETX-202ENST00000436441 HIRIP3Q9BW71 556 aaPredicted RBP12.96□□□□□ -0.34
SETX-202ENST00000436441 ANP32EQ9BTT0 268 aa12.95□□□□□ -0.34
SETX-202ENST00000436441 MYH16Q9H6N6 1097 aa12.94□□□□□ -0.34
SETX-202ENST00000436441 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.94□□□□□ -0.342e-6■■■□□ 17.6
SETX-202ENST00000436441 KDM2AQ9Y2K7 1162 aa12.94□□□□□ -0.34
SETX-202ENST00000436441 EIF4G2P78344 907 aaKnown RBP eCLIP12.94□□□□□ -0.34
SETX-202ENST00000436441 TRIM44Q96DX7 344 aaPredicted RBP12.93□□□□□ -0.34
SETX-202ENST00000436441 SCRIBQ14160 1630 aa12.92□□□□□ -0.34
SETX-202ENST00000436441 MTUS2Q5JR59 1369 aa12.9□□□□□ -0.34
SETX-202ENST00000436441 CLIP1P30622 1438 aa12.89□□□□□ -0.35
SETX-202ENST00000436441 GOLGA6L22H0YM25 854 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms