RNA–Protein interactions for RNA: ENST00000433666.5

CUBN-203, Transcript of cubilin, humanhuman

TSL 5

Gene CUBN, Length 958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-203ENST00000433666 AEBP2Q6ZN18 517 aaPredicted RBP27.44■■□□□ 1.98
CUBN-203ENST00000433666 CHIC1Q5VXU3 224 aa25.52■■□□□ 1.68
CUBN-203ENST00000433666 SENP3Q9H4L4 574 aaPredicted RBP23.38■■□□□ 1.33
CUBN-203ENST00000433666 PHF23Q9BUL5 403 aaPredicted RBP23.07■■□□□ 1.28
CUBN-203ENST00000433666 FOXD1Q16676 465 aa21.92■■□□□ 1.1
CUBN-203ENST00000433666 POTEDQ86YR6 584 aa21.03■□□□□ 0.96
CUBN-203ENST00000433666 MSH5O43196 834 aa20.61■□□□□ 0.89
CUBN-203ENST00000433666 PIAS4Q8N2W9 510 aaPredicted RBP20.34■□□□□ 0.85
CUBN-203ENST00000433666 PPP6R1Q9UPN7 881 aa20.17■□□□□ 0.82
CUBN-203ENST00000433666 PLPPR3Q6T4P5 718 aa20.13■□□□□ 0.81
CUBN-203ENST00000433666 ADRA2BP18089 450 aa20.06■□□□□ 0.8
CUBN-203ENST00000433666 MAPK8IP2Q13387 824 aaPredicted RBP18.6■□□□□ 0.57
CUBN-203ENST00000433666 DMRT2Q9Y5R5 561 aa18.48■□□□□ 0.55
CUBN-203ENST00000433666 SCAF1Q9H7N4 1312 aaKnown RBP18.23■□□□□ 0.51
CUBN-203ENST00000433666 CACNB1Q02641 598 aaPredicted RBP18.04■□□□□ 0.48
CUBN-203ENST00000433666 DCAF8L1A6NGE4 600 aa17.79■□□□□ 0.44
CUBN-203ENST00000433666 PPP4R3CPQ6ZMV5 832 aa17.63■□□□□ 0.41
CUBN-203ENST00000433666 HOXD11P31277 338 aaPredicted RBP17.61■□□□□ 0.41
CUBN-203ENST00000433666 RNF39Q9H2S5 420 aa17.59■□□□□ 0.41
CUBN-203ENST00000433666 CNKSR2Q8WXI2 1034 aa17.37■□□□□ 0.37
CUBN-203ENST00000433666 RNF216Q9NWF9 866 aaPredicted RBP17.33■□□□□ 0.36
CUBN-203ENST00000433666 C1QBPQ07021 282 aaKnown RBP17.27■□□□□ 0.36
CUBN-203ENST00000433666 DNAJC5BQ9UF47 199 aa17.02■□□□□ 0.32
CUBN-203ENST00000433666 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.79■□□□□ 0.28
CUBN-203ENST00000433666 NCBP3Q53F19 620 aaKnown RBP16.73■□□□□ 0.27
CUBN-203ENST00000433666 NPM3O75607 178 aaKnown RBP16.57■□□□□ 0.24
CUBN-203ENST00000433666 U3KPZ7 1027 aaPredicted RBP16.4■□□□□ 0.22
CUBN-203ENST00000433666 POTEHQ6S545 545 aa16.36■□□□□ 0.21
CUBN-203ENST00000433666 SPINK5Q9NQ38 1064 aaPredicted RBP16.35■□□□□ 0.21
CUBN-203ENST00000433666 DSG3P32926 999 aa16.32■□□□□ 0.2
CUBN-203ENST00000433666 CAPN15O75808 1086 aa16.3■□□□□ 0.2
CUBN-203ENST00000433666 SLC4A2P04920 1241 aa15.98■□□□□ 0.15
CUBN-203ENST00000433666 TRHP20396 242 aaPredicted RBP15.94■□□□□ 0.14
CUBN-203ENST00000433666 ABCB7O75027 752 aa15.92■□□□□ 0.14
CUBN-203ENST00000433666 KCNA4P22459 653 aa15.85■□□□□ 0.13
CUBN-203ENST00000433666 ZNF219Q9P2Y4 722 aaPredicted RBP15.81■□□□□ 0.12
CUBN-203ENST00000433666 APLP2Q06481 763 aa15.76■□□□□ 0.11
CUBN-203ENST00000433666 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.66■□□□□ 0.1
CUBN-203ENST00000433666 HNRNPUL2Q1KMD3 747 aaKnown RBP15.66■□□□□ 0.1
CUBN-203ENST00000433666 NISCHQ9Y2I1 1504 aa15.59■□□□□ 0.09
CUBN-203ENST00000433666 SAMD1Q6SPF0 538 aaPredicted RBP15.59■□□□□ 0.09
CUBN-203ENST00000433666 RBM42Q9BTD8 480 aaKnown RBP15.51■□□□□ 0.07
CUBN-203ENST00000433666 CHRDL2Q6WN34 429 aa15.43■□□□□ 0.06
CUBN-203ENST00000433666 POLA2Q14181 598 aa15.4■□□□□ 0.06
CUBN-203ENST00000433666 MYCNP04198 464 aaPredicted RBP15.28■□□□□ 0.04
CUBN-203ENST00000433666 SP7Q8TDD2 431 aaPredicted RBP15.1■□□□□ 0.01
CUBN-203ENST00000433666 AKT1S1Q96B36 256 aa15.08■□□□□ 0
CUBN-203ENST00000433666 ATF5Q9Y2D1 282 aaPredicted RBP15.08■□□□□ 0
CUBN-203ENST00000433666 REM2Q8IYK8 340 aaPredicted RBP14.99□□□□□ -0.01
CUBN-203ENST00000433666 PIP4P2Q8N4L2 257 aa14.97□□□□□ -0.01
CUBN-203ENST00000433666 ZBTB12Q9Y330 459 aaPredicted RBP14.94□□□□□ -0.02
CUBN-203ENST00000433666 OSCARQ8IYS5 282 aa14.93□□□□□ -0.02
CUBN-203ENST00000433666 FOXD4L1Q9NU39 408 aa14.88□□□□□ -0.03
CUBN-203ENST00000433666 PITPNM1O00562 1244 aa14.84□□□□□ -0.03
CUBN-203ENST00000433666 HAX1O00165 279 aa14.83□□□□□ -0.04
CUBN-203ENST00000433666 SLC4A1APQ9BWU0 796 aaKnown RBP14.82□□□□□ -0.04
CUBN-203ENST00000433666 FXR2P51116 673 aaKnown RBP eCLIP14.78□□□□□ -0.04
CUBN-203ENST00000433666 EVX2Q03828 476 aa14.68□□□□□ -0.06
CUBN-203ENST00000433666 ZBTB22O15209 634 aa14.59□□□□□ -0.07
CUBN-203ENST00000433666 SPDYE2BA6NHP3 402 aa14.48□□□□□ -0.09
CUBN-203ENST00000433666 SPDYE6P0CI01 402 aa14.48□□□□□ -0.09
CUBN-203ENST00000433666 SPDYE2Q495Y8 402 aa14.48□□□□□ -0.09
CUBN-203ENST00000433666 PRKAR2AP13861 404 aaKnown RBP14.44□□□□□ -0.1
CUBN-203ENST00000433666 ATXN8OSP0DMR3 200 aa14.43□□□□□ -0.1
CUBN-203ENST00000433666 FBLN2P98095 1184 aa14.41□□□□□ -0.1
CUBN-203ENST00000433666 CLEC11AQ9Y240 323 aa14.41□□□□□ -0.1
CUBN-203ENST00000433666 SPDYE1Q8NFV5 336 aaPredicted RBP14.35□□□□□ -0.11
CUBN-203ENST00000433666 C19orf67A6NJJ6 358 aa14.33□□□□□ -0.12
CUBN-203ENST00000433666 MKRN4PQ13434 485 aaPredicted RBP14.33□□□□□ -0.12
CUBN-203ENST00000433666 ZNF692Q9BU19 519 aaPredicted RBP14.27□□□□□ -0.13
CUBN-203ENST00000433666 GABBR2O75899 941 aa14.26□□□□□ -0.13
CUBN-203ENST00000433666 SSUH2Q9Y2M2 353 aa14.26□□□□□ -0.13
CUBN-203ENST00000433666 CHADLQ6NUI6 762 aa14.22□□□□□ -0.13
CUBN-203ENST00000433666 LHX8Q68G74 356 aa14.17□□□□□ -0.14
CUBN-203ENST00000433666 PRR29P0C7W0 189 aa14.07□□□□□ -0.16
CUBN-203ENST00000433666 PABPN1Q86U42 306 aaKnown RBP eCLIP14.06□□□□□ -0.16
CUBN-203ENST00000433666 POTEIP0CG38 1075 aa13.99□□□□□ -0.17
CUBN-203ENST00000433666 CD44P16070 742 aaKnown RBP13.94□□□□□ -0.18
CUBN-203ENST00000433666 FARP1Q9Y4F1 1045 aaPredicted RBP13.92□□□□□ -0.18
CUBN-203ENST00000433666 CLCN6P51797 869 aa13.75□□□□□ -0.21
CUBN-203ENST00000433666 DCBLD2Q96PD2 775 aa13.75□□□□□ -0.21
CUBN-203ENST00000433666 ZNF579Q8NAF0 562 aaKnown RBP13.69□□□□□ -0.22
CUBN-203ENST00000433666 PLSCR2Q9NRY7 297 aa13.69□□□□□ -0.22
CUBN-203ENST00000433666 ZRANB1Q9UGI0 708 aa13.68□□□□□ -0.22
CUBN-203ENST00000433666 CREBZFQ9NS37 354 aa13.64□□□□□ -0.23
CUBN-203ENST00000433666 GALR2O43603 387 aaPredicted RBP13.61□□□□□ -0.23
CUBN-203ENST00000433666 CCDC180Q9P1Z9 1646 aa13.6□□□□□ -0.23
CUBN-203ENST00000433666 OTUD5Q96G74 571 aa13.55□□□□□ -0.24
CUBN-203ENST00000433666 POTEB2H3BUK9 544 aa13.53□□□□□ -0.24
CUBN-203ENST00000433666 STAG3Q9UJ98 1225 aa13.49□□□□□ -0.25
CUBN-203ENST00000433666 PHF12Q96QT6 1004 aa13.48□□□□□ -0.25
CUBN-203ENST00000433666 CSRNP3Q8WYN3 585 aa13.45□□□□□ -0.26
CUBN-203ENST00000433666 PELP1Q8IZL8 1130 aaKnown RBP13.42□□□□□ -0.26
CUBN-203ENST00000433666 PAK3O75914 559 aaPredicted RBP13.4□□□□□ -0.26
CUBN-203ENST00000433666 POTEMA6NI47 508 aa13.37□□□□□ -0.27
CUBN-203ENST00000433666 SPDYE4A6NLX3 237 aa13.36□□□□□ -0.27
CUBN-203ENST00000433666 MNX1P50219 401 aaPredicted RBP13.35□□□□□ -0.27
CUBN-203ENST00000433666 POTEGQ6S5H5 508 aa13.32□□□□□ -0.28
CUBN-203ENST00000433666 NPM1P06748 294 aaKnown RBP eCLIP13.31□□□□□ -0.28
CUBN-203ENST00000433666 POTEJP0CG39 1038 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms