RNA–Protein interactions for RNA: ENST00000432635.1

LTBP1-209, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

TSL 5

Gene LTBP1, Length 593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-209ENST00000432635 AEBP2Q6ZN18 517 aaPredicted RBP27.49■■□□□ 1.99
LTBP1-209ENST00000432635 CHIC1Q5VXU3 224 aa26.55■■□□□ 1.84
LTBP1-209ENST00000432635 SENP3Q9H4L4 574 aaPredicted RBP23.38■■□□□ 1.33
LTBP1-209ENST00000432635 PHF23Q9BUL5 403 aaPredicted RBP23.31■■□□□ 1.32
LTBP1-209ENST00000432635 FOXD1Q16676 465 aa21.73■■□□□ 1.07
LTBP1-209ENST00000432635 PLPPR3Q6T4P5 718 aa21.43■■□□□ 1.02
LTBP1-209ENST00000432635 PPP6R1Q9UPN7 881 aa20.66■□□□□ 0.9
LTBP1-209ENST00000432635 ADRA2BP18089 450 aa20.62■□□□□ 0.89
LTBP1-209ENST00000432635 PIAS4Q8N2W9 510 aaPredicted RBP20.42■□□□□ 0.86
LTBP1-209ENST00000432635 MSH5O43196 834 aa20.17■□□□□ 0.82
LTBP1-209ENST00000432635 POTEDQ86YR6 584 aa19.15■□□□□ 0.66
LTBP1-209ENST00000432635 SCAF1Q9H7N4 1312 aaKnown RBP18.89■□□□□ 0.61
LTBP1-209ENST00000432635 PPP4R3CPQ6ZMV5 832 aa18.84■□□□□ 0.61
LTBP1-209ENST00000432635 MAPK8IP2Q13387 824 aaPredicted RBP18.8■□□□□ 0.6
LTBP1-209ENST00000432635 DMRT2Q9Y5R5 561 aa18.62■□□□□ 0.57
LTBP1-209ENST00000432635 CNKSR2Q8WXI2 1034 aa18.38■□□□□ 0.53
LTBP1-209ENST00000432635 NCBP3Q53F19 620 aaKnown RBP18.25■□□□□ 0.51
LTBP1-209ENST00000432635 HOXD11P31277 338 aaPredicted RBP18.11■□□□□ 0.49
LTBP1-209ENST00000432635 RNF216Q9NWF9 866 aaPredicted RBP18.1■□□□□ 0.49
LTBP1-209ENST00000432635 KCNA4P22459 653 aa18.04■□□□□ 0.48
LTBP1-209ENST00000432635 NPM3O75607 178 aaKnown RBP17.99■□□□□ 0.47
LTBP1-209ENST00000432635 DCAF8L1A6NGE4 600 aa17.81■□□□□ 0.44
LTBP1-209ENST00000432635 DNAJC5BQ9UF47 199 aa17.53■□□□□ 0.4
LTBP1-209ENST00000432635 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.25■□□□□ 0.35
LTBP1-209ENST00000432635 RNF39Q9H2S5 420 aa17.25■□□□□ 0.35
LTBP1-209ENST00000432635 SLC4A1APQ9BWU0 796 aaKnown RBP17.13■□□□□ 0.33
LTBP1-209ENST00000432635 SLC4A2P04920 1241 aa17.06■□□□□ 0.32
LTBP1-209ENST00000432635 NISCHQ9Y2I1 1504 aa17.06■□□□□ 0.32
LTBP1-209ENST00000432635 C1QBPQ07021 282 aaKnown RBP17.02■□□□□ 0.32
LTBP1-209ENST00000432635 CACNB1Q02641 598 aaPredicted RBP17.01■□□□□ 0.31
LTBP1-209ENST00000432635 U3KPZ7 1027 aaPredicted RBP16.94■□□□□ 0.3
LTBP1-209ENST00000432635 FOXD4L1Q9NU39 408 aa16.71■□□□□ 0.27
LTBP1-209ENST00000432635 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.63■□□□□ 0.25
LTBP1-209ENST00000432635 MYCNP04198 464 aaPredicted RBP16.63■□□□□ 0.25
LTBP1-209ENST00000432635 HNRNPUL2Q1KMD3 747 aaKnown RBP16.63■□□□□ 0.25
LTBP1-209ENST00000432635 ZBTB22O15209 634 aa16.61■□□□□ 0.25
LTBP1-209ENST00000432635 SAMD1Q6SPF0 538 aaPredicted RBP16.56■□□□□ 0.24
LTBP1-209ENST00000432635 SPINK5Q9NQ38 1064 aaPredicted RBP16.55■□□□□ 0.24
LTBP1-209ENST00000432635 APLP2Q06481 763 aa16.53■□□□□ 0.24
LTBP1-209ENST00000432635 CAPN15O75808 1086 aa16.5■□□□□ 0.23
LTBP1-209ENST00000432635 ZNF219Q9P2Y4 722 aaPredicted RBP16.35■□□□□ 0.21
LTBP1-209ENST00000432635 TRHP20396 242 aaPredicted RBP16.34■□□□□ 0.21
LTBP1-209ENST00000432635 DSG3P32926 999 aa16.3■□□□□ 0.2
LTBP1-209ENST00000432635 EHMT2Q96KQ7 1210 aa16.29■□□□□ 0.2
LTBP1-209ENST00000432635 CSRNP3Q8WYN3 585 aa16.24■□□□□ 0.19
LTBP1-209ENST00000432635 ATF5Q9Y2D1 282 aaPredicted RBP16.21■□□□□ 0.19
LTBP1-209ENST00000432635 ABCB7O75027 752 aa16.16■□□□□ 0.18
LTBP1-209ENST00000432635 ATXN8OSP0DMR3 200 aa16.16■□□□□ 0.18
LTBP1-209ENST00000432635 POLA2Q14181 598 aa16.01■□□□□ 0.15
LTBP1-209ENST00000432635 ZBTB12Q9Y330 459 aaPredicted RBP15.75■□□□□ 0.11
LTBP1-209ENST00000432635 FBLN2P98095 1184 aa15.55■□□□□ 0.08
LTBP1-209ENST00000432635 RBM42Q9BTD8 480 aaKnown RBP15.55■□□□□ 0.08
LTBP1-209ENST00000432635 OSCARQ8IYS5 282 aa15.5■□□□□ 0.07
LTBP1-209ENST00000432635 MKRN4PQ13434 485 aaPredicted RBP15.49■□□□□ 0.07
LTBP1-209ENST00000432635 SPDYE2BA6NHP3 402 aa15.29■□□□□ 0.04
LTBP1-209ENST00000432635 SPDYE6P0CI01 402 aa15.29■□□□□ 0.04
LTBP1-209ENST00000432635 SPDYE2Q495Y8 402 aa15.29■□□□□ 0.04
LTBP1-209ENST00000432635 AKT1S1Q96B36 256 aa15.29■□□□□ 0.04
LTBP1-209ENST00000432635 ZNF692Q9BU19 519 aaPredicted RBP15.17■□□□□ 0.02
LTBP1-209ENST00000432635 SSUH2Q9Y2M2 353 aa15.15■□□□□ 0.02
LTBP1-209ENST00000432635 REM2Q8IYK8 340 aaPredicted RBP15.14■□□□□ 0.01
LTBP1-209ENST00000432635 CHRDL2Q6WN34 429 aa15.02■□□□□ -0
LTBP1-209ENST00000432635 SPDYE4A6NLX3 237 aa14.99□□□□□ -0.01
LTBP1-209ENST00000432635 PITPNM1O00562 1244 aa14.98□□□□□ -0.01
LTBP1-209ENST00000432635 PABPN1Q86U42 306 aaKnown RBP eCLIP14.96□□□□□ -0.01
LTBP1-209ENST00000432635 CCDC180Q9P1Z9 1646 aa14.93□□□□□ -0.02
LTBP1-209ENST00000432635 POTEHQ6S545 545 aa14.91□□□□□ -0.02
LTBP1-209ENST00000432635 SPDYE1Q8NFV5 336 aaPredicted RBP14.91□□□□□ -0.02
LTBP1-209ENST00000432635 CLEC11AQ9Y240 323 aa14.84□□□□□ -0.03
LTBP1-209ENST00000432635 FXR2P51116 673 aaKnown RBP eCLIP14.76□□□□□ -0.05
LTBP1-209ENST00000432635 PIP4P2Q8N4L2 257 aa14.76□□□□□ -0.05
LTBP1-209ENST00000432635 PROM2Q8N271 834 aa14.72□□□□□ -0.05
LTBP1-209ENST00000432635 FKBP8Q14318 412 aa14.71□□□□□ -0.05
LTBP1-209ENST00000432635 PRR29P0C7W0 189 aa14.67□□□□□ -0.06
LTBP1-209ENST00000432635 STAG3Q9UJ98 1225 aa14.66□□□□□ -0.06
LTBP1-209ENST00000432635 PRKAR2AP13861 404 aaKnown RBP14.59□□□□□ -0.07
LTBP1-209ENST00000432635 CHADLQ6NUI6 762 aa14.52□□□□□ -0.09
LTBP1-209ENST00000432635 CREBZFQ9NS37 354 aa14.43□□□□□ -0.1
LTBP1-209ENST00000432635 HAX1O00165 279 aa14.36□□□□□ -0.11
LTBP1-209ENST00000432635 FARP1Q9Y4F1 1045 aaPredicted RBP14.36□□□□□ -0.11
LTBP1-209ENST00000432635 ZCCHC6Q5VYS8 1495 aaKnown RBP14.31□□□□□ -0.12
LTBP1-209ENST00000432635 FBXO3Q9UK99 471 aa14.28□□□□□ -0.12
LTBP1-209ENST00000432635 C19orf67A6NJJ6 358 aa14.27□□□□□ -0.13
LTBP1-209ENST00000432635 MNX1P50219 401 aaPredicted RBP14.24□□□□□ -0.13
LTBP1-209ENST00000432635 MIER1Q8N108 512 aa14.23□□□□□ -0.13
LTBP1-209ENST00000432635 EVX2Q03828 476 aa14.22□□□□□ -0.13
LTBP1-209ENST00000432635 PLEKHG5O94827 1062 aa14.19□□□□□ -0.14
LTBP1-209ENST00000432635 PLCD3Q8N3E9 789 aa14.19□□□□□ -0.14
LTBP1-209ENST00000432635 SP7Q8TDD2 431 aaPredicted RBP14.19□□□□□ -0.14
LTBP1-209ENST00000432635 NPM1P06748 294 aaKnown RBP eCLIP14.18□□□□□ -0.14
LTBP1-209ENST00000432635 CD44P16070 742 aaKnown RBP14.16□□□□□ -0.14
LTBP1-209ENST00000432635 DCAF1Q9Y4B6 1507 aa14.15□□□□□ -0.14
LTBP1-209ENST00000432635 ABCC9O60706 1549 aa14.1□□□□□ -0.15
LTBP1-209ENST00000432635 VASPP50552 380 aaPredicted RBP14.09□□□□□ -0.15
LTBP1-209ENST00000432635 ZBTB47Q9UFB7 747 aaPredicted RBP14.06□□□□□ -0.16
LTBP1-209ENST00000432635 MYO15BQ96JP2 1530 aa14.03□□□□□ -0.16
LTBP1-209ENST00000432635 PAK3O75914 559 aaPredicted RBP14.02□□□□□ -0.17
LTBP1-209ENST00000432635 ZRANB1Q9UGI0 708 aa14.02□□□□□ -0.17
LTBP1-209ENST00000432635 DCAF8L2P0C7V8 631 aa14□□□□□ -0.17
LTBP1-209ENST00000432635 ZNF579Q8NAF0 562 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms