RNA–Protein interactions for RNA: ENST00000417998.5

CASP12-202, Transcript of caspase 12 (gene/pseudogene), humanhuman

TSL 1 (best)

Gene CASP12, Length 1,401 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP12-202ENST00000417998 AEBP2Q6ZN18 517 aaPredicted RBP22.88■■□□□ 1.25
CASP12-202ENST00000417998 CHIC1Q5VXU3 224 aa22.04■■□□□ 1.12
CASP12-202ENST00000417998 SENP3Q9H4L4 574 aaPredicted RBP19.43■□□□□ 0.7
CASP12-202ENST00000417998 PHF23Q9BUL5 403 aaPredicted RBP19.36■□□□□ 0.69
CASP12-202ENST00000417998 FOXD1Q16676 465 aa18.08■□□□□ 0.49
CASP12-202ENST00000417998 PLPPR3Q6T4P5 718 aa17.72■□□□□ 0.43
CASP12-202ENST00000417998 PPP6R1Q9UPN7 881 aa17.16■□□□□ 0.34
CASP12-202ENST00000417998 ADRA2BP18089 450 aa17.11■□□□□ 0.33
CASP12-202ENST00000417998 PIAS4Q8N2W9 510 aaPredicted RBP16.95■□□□□ 0.3
CASP12-202ENST00000417998 MSH5O43196 834 aa16.78■□□□□ 0.28
CASP12-202ENST00000417998 POTEDQ86YR6 584 aa15.83■□□□□ 0.12
CASP12-202ENST00000417998 SCAF1Q9H7N4 1312 aaKnown RBP15.62■□□□□ 0.09
CASP12-202ENST00000417998 MAPK8IP2Q13387 824 aaPredicted RBP15.61■□□□□ 0.09
CASP12-202ENST00000417998 PPP4R3CPQ6ZMV5 832 aa15.58■□□□□ 0.08
CASP12-202ENST00000417998 NISCHQ9Y2I1 1504 aa15.55■□□□□ 0.08
CASP12-202ENST00000417998 DMRT2Q9Y5R5 561 aa15.48■□□□□ 0.07
CASP12-202ENST00000417998 CNKSR2Q8WXI2 1034 aa15.22■□□□□ 0.03
CASP12-202ENST00000417998 HOXD11P31277 338 aaPredicted RBP15.06■□□□□ 0
CASP12-202ENST00000417998 NCBP3Q53F19 620 aaKnown RBP15.06■□□□□ 0
CASP12-202ENST00000417998 RNF216Q9NWF9 866 aaPredicted RBP15□□□□□ -0.01
CASP12-202ENST00000417998 NPM3O75607 178 aaKnown RBP14.88□□□□□ -0.03
CASP12-202ENST00000417998 KCNA4P22459 653 aa14.88□□□□□ -0.03
CASP12-202ENST00000417998 DCAF8L1A6NGE4 600 aa14.72□□□□□ -0.05
CASP12-202ENST00000417998 DNAJC5BQ9UF47 199 aa14.58□□□□□ -0.08
CASP12-202ENST00000417998 RNF39Q9H2S5 420 aa14.38□□□□□ -0.11
CASP12-202ENST00000417998 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.26□□□□□ -0.13
CASP12-202ENST00000417998 C1QBPQ07021 282 aaKnown RBP14.16□□□□□ -0.14
CASP12-202ENST00000417998 CACNB1Q02641 598 aaPredicted RBP14.15□□□□□ -0.14
CASP12-202ENST00000417998 SLC4A2P04920 1241 aa14.15□□□□□ -0.14
CASP12-202ENST00000417998 SLC4A1APQ9BWU0 796 aaKnown RBP14.09□□□□□ -0.15
CASP12-202ENST00000417998 U3KPZ7 1027 aaPredicted RBP14.07□□□□□ -0.16
CASP12-202ENST00000417998 FOXD4L1Q9NU39 408 aa13.79□□□□□ -0.2
CASP12-202ENST00000417998 MYCNP04198 464 aaPredicted RBP13.75□□□□□ -0.21
CASP12-202ENST00000417998 SPINK5Q9NQ38 1064 aaPredicted RBP13.74□□□□□ -0.21
CASP12-202ENST00000417998 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.73□□□□□ -0.21
CASP12-202ENST00000417998 HNRNPUL2Q1KMD3 747 aaKnown RBP13.73□□□□□ -0.21
CASP12-202ENST00000417998 ZBTB22O15209 634 aa13.73□□□□□ -0.21
CASP12-202ENST00000417998 SAMD1Q6SPF0 538 aaPredicted RBP13.69□□□□□ -0.22
CASP12-202ENST00000417998 CAPN15O75808 1086 aa13.65□□□□□ -0.22
CASP12-202ENST00000417998 APLP2Q06481 763 aa13.65□□□□□ -0.22
CASP12-202ENST00000417998 DSG3P32926 999 aa13.56□□□□□ -0.24
CASP12-202ENST00000417998 ZNF219Q9P2Y4 722 aaPredicted RBP13.54□□□□□ -0.24
CASP12-202ENST00000417998 CCDC180Q9P1Z9 1646 aa13.52□□□□□ -0.24
CASP12-202ENST00000417998 TRHP20396 242 aaPredicted RBP13.51□□□□□ -0.25
CASP12-202ENST00000417998 ATF5Q9Y2D1 282 aaPredicted RBP13.42□□□□□ -0.26
CASP12-202ENST00000417998 ABCB7O75027 752 aa13.39□□□□□ -0.27
CASP12-202ENST00000417998 CSRNP3Q8WYN3 585 aa13.36□□□□□ -0.27
CASP12-202ENST00000417998 ATXN8OSP0DMR3 200 aa13.35□□□□□ -0.27
CASP12-202ENST00000417998 EHMT2Q96KQ7 1210 aa13.3□□□□□ -0.28
CASP12-202ENST00000417998 POLA2Q14181 598 aa13.24□□□□□ -0.29
CASP12-202ENST00000417998 ZCCHC6Q5VYS8 1495 aaKnown RBP13.18□□□□□ -0.3
CASP12-202ENST00000417998 ZBTB12Q9Y330 459 aaPredicted RBP13.02□□□□□ -0.33
CASP12-202ENST00000417998 DCAF1Q9Y4B6 1507 aa13□□□□□ -0.33
CASP12-202ENST00000417998 RBM42Q9BTD8 480 aaKnown RBP12.9□□□□□ -0.34
CASP12-202ENST00000417998 MKRN4PQ13434 485 aaPredicted RBP12.84□□□□□ -0.35
CASP12-202ENST00000417998 OSCARQ8IYS5 282 aa12.83□□□□□ -0.36
CASP12-202ENST00000417998 FBLN2P98095 1184 aa12.81□□□□□ -0.36
CASP12-202ENST00000417998 MYO15BQ96JP2 1530 aa12.75□□□□□ -0.37
CASP12-202ENST00000417998 AKT1S1Q96B36 256 aa12.7□□□□□ -0.38
CASP12-202ENST00000417998 SHROOM4Q9ULL8 1493 aa12.68□□□□□ -0.38
CASP12-202ENST00000417998 SPDYE2BA6NHP3 402 aa12.66□□□□□ -0.38
CASP12-202ENST00000417998 SPDYE6P0CI01 402 aa12.66□□□□□ -0.38
CASP12-202ENST00000417998 SPDYE2Q495Y8 402 aa12.66□□□□□ -0.38
CASP12-202ENST00000417998 REM2Q8IYK8 340 aaPredicted RBP12.56□□□□□ -0.4
CASP12-202ENST00000417998 SSUH2Q9Y2M2 353 aa12.56□□□□□ -0.4
CASP12-202ENST00000417998 ZNF692Q9BU19 519 aaPredicted RBP12.52□□□□□ -0.41
CASP12-202ENST00000417998 CHRDL2Q6WN34 429 aa12.5□□□□□ -0.41
CASP12-202ENST00000417998 NACADO15069 1562 aa12.47□□□□□ -0.41
CASP12-202ENST00000417998 POTEHQ6S545 545 aa12.45□□□□□ -0.42
CASP12-202ENST00000417998 DCAF8L2P0C7V8 631 aa12.45□□□□□ -0.42
CASP12-202ENST00000417998 PITPNM1O00562 1244 aa12.44□□□□□ -0.42
CASP12-202ENST00000417998 ABCC9O60706 1549 aa12.43□□□□□ -0.42
CASP12-202ENST00000417998 SUPT5HO00267 1087 aaKnown RBP12.39□□□□□ -0.43
CASP12-202ENST00000417998 PABPN1Q86U42 306 aaKnown RBP eCLIP12.36□□□□□ -0.43
CASP12-202ENST00000417998 SPDYE4A6NLX3 237 aa12.35□□□□□ -0.43
CASP12-202ENST00000417998 SPDYE1Q8NFV5 336 aaPredicted RBP12.34□□□□□ -0.43
CASP12-202ENST00000417998 SCRIBQ14160 1630 aa12.29□□□□□ -0.44
CASP12-202ENST00000417998 PIP4P2Q8N4L2 257 aa12.28□□□□□ -0.44
CASP12-202ENST00000417998 FXR2P51116 673 aaKnown RBP eCLIP12.28□□□□□ -0.44
CASP12-202ENST00000417998 RB1CC1Q8TDY2 1594 aa12.26□□□□□ -0.45
CASP12-202ENST00000417998 CLEC11AQ9Y240 323 aa12.25□□□□□ -0.45
CASP12-202ENST00000417998 PROM2Q8N271 834 aa12.19□□□□□ -0.46
CASP12-202ENST00000417998 RSF1Q96T23 1441 aaPredicted RBP12.15□□□□□ -0.46
CASP12-202ENST00000417998 PRR29P0C7W0 189 aa12.11□□□□□ -0.47
CASP12-202ENST00000417998 PRKAR2AP13861 404 aaKnown RBP12.09□□□□□ -0.47
CASP12-202ENST00000417998 STAG3Q9UJ98 1225 aa12.09□□□□□ -0.47
CASP12-202ENST00000417998 FKBP8Q14318 412 aa12.05□□□□□ -0.48
CASP12-202ENST00000417998 BAZ1AQ9NRL2 1556 aaPredicted RBP12.03□□□□□ -0.48
CASP12-202ENST00000417998 CHADLQ6NUI6 762 aa12.03□□□□□ -0.48
CASP12-202ENST00000417998 CREBZFQ9NS37 354 aa11.95□□□□□ -0.5
CASP12-202ENST00000417998 MROH2BQ7Z745 1585 aa11.95□□□□□ -0.5
CASP12-202ENST00000417998 UNC13AQ9UPW8 1703 aa11.94□□□□□ -0.5
CASP12-202ENST00000417998 CECR2Q9BXF3 1484 aa11.93□□□□□ -0.5
CASP12-202ENST00000417998 HAX1O00165 279 aa11.91□□□□□ -0.5
CASP12-202ENST00000417998 FARP1Q9Y4F1 1045 aaPredicted RBP11.9□□□□□ -0.5
CASP12-202ENST00000417998 SMARCA4P51532 1647 aa11.89□□□□□ -0.51
CASP12-202ENST00000417998 C19orf67A6NJJ6 358 aa11.88□□□□□ -0.51
CASP12-202ENST00000417998 TOP2AP11388 1531 aaKnown RBP11.87□□□□□ -0.51
CASP12-202ENST00000417998 WIZO95785 1651 aa11.86□□□□□ -0.51
CASP12-202ENST00000417998 EVX2Q03828 476 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms