RNA–Protein interactions for RNA: ENST00000416751.2

SMARCA2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-210ENST00000416751 AEBP2Q6ZN18 517 aaPredicted RBP23.14■■□□□ 1.29
SMARCA2-210ENST00000416751 CHIC1Q5VXU3 224 aa21.62■■□□□ 1.05
SMARCA2-210ENST00000416751 SENP3Q9H4L4 574 aaPredicted RBP19.83■□□□□ 0.77
SMARCA2-210ENST00000416751 PHF23Q9BUL5 403 aaPredicted RBP19.52■□□□□ 0.72
SMARCA2-210ENST00000416751 FOXD1Q16676 465 aa18.6■□□□□ 0.57
SMARCA2-210ENST00000416751 POTEDQ86YR6 584 aa18.43■□□□□ 0.54
SMARCA2-210ENST00000416751 MSH5O43196 834 aa17.64■□□□□ 0.41
SMARCA2-210ENST00000416751 PIAS4Q8N2W9 510 aaPredicted RBP17.24■□□□□ 0.35
SMARCA2-210ENST00000416751 PPP6R1Q9UPN7 881 aa16.87■□□□□ 0.29
SMARCA2-210ENST00000416751 ADRA2BP18089 450 aa16.81■□□□□ 0.28
SMARCA2-210ENST00000416751 PLPPR3Q6T4P5 718 aa16.76■□□□□ 0.27
SMARCA2-210ENST00000416751 MAPK8IP2Q13387 824 aaPredicted RBP15.66■□□□□ 0.1
SMARCA2-210ENST00000416751 CACNB1Q02641 598 aaPredicted RBP15.65■□□□□ 0.1
SMARCA2-210ENST00000416751 DMRT2Q9Y5R5 561 aa15.6■□□□□ 0.09
SMARCA2-210ENST00000416751 SCAF1Q9H7N4 1312 aaKnown RBP15.35■□□□□ 0.05
SMARCA2-210ENST00000416751 DCAF8L1A6NGE4 600 aa15.16■□□□□ 0.02
SMARCA2-210ENST00000416751 RNF39Q9H2S5 420 aa14.98□□□□□ -0.01
SMARCA2-210ENST00000416751 KCNA4P22459 653 aa14.91□□□□□ -0.02
SMARCA2-210ENST00000416751 PPP4R3CPQ6ZMV5 832 aa14.83□□□□□ -0.04
SMARCA2-210ENST00000416751 HOXD11P31277 338 aaPredicted RBP14.74□□□□□ -0.05
SMARCA2-210ENST00000416751 C1QBPQ07021 282 aaKnown RBP14.72□□□□□ -0.05
SMARCA2-210ENST00000416751 NCBP3Q53F19 620 aaKnown RBP14.46□□□□□ -0.09
SMARCA2-210ENST00000416751 RNF216Q9NWF9 866 aaPredicted RBP14.46□□□□□ -0.09
SMARCA2-210ENST00000416751 CNKSR2Q8WXI2 1034 aa14.44□□□□□ -0.1
SMARCA2-210ENST00000416751 NPM3O75607 178 aaKnown RBP14.36□□□□□ -0.11
SMARCA2-210ENST00000416751 POTEHQ6S545 545 aa14.32□□□□□ -0.12
SMARCA2-210ENST00000416751 DNAJC5BQ9UF47 199 aa14.29□□□□□ -0.12
SMARCA2-210ENST00000416751 SLC4A1APQ9BWU0 796 aaKnown RBP14.2□□□□□ -0.14
SMARCA2-210ENST00000416751 EHMT2Q96KQ7 1210 aa14.16□□□□□ -0.14
SMARCA2-210ENST00000416751 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.15□□□□□ -0.14
SMARCA2-210ENST00000416751 CSRNP3Q8WYN3 585 aa13.93□□□□□ -0.18
SMARCA2-210ENST00000416751 DSG3P32926 999 aa13.82□□□□□ -0.2
SMARCA2-210ENST00000416751 CAPN15O75808 1086 aa13.81□□□□□ -0.2
SMARCA2-210ENST00000416751 ZBTB22O15209 634 aa13.79□□□□□ -0.2
SMARCA2-210ENST00000416751 SPINK5Q9NQ38 1064 aaPredicted RBP13.76□□□□□ -0.21
SMARCA2-210ENST00000416751 U3KPZ7 1027 aaPredicted RBP13.72□□□□□ -0.21
SMARCA2-210ENST00000416751 FOXD4L1Q9NU39 408 aa13.59□□□□□ -0.23
SMARCA2-210ENST00000416751 SLC4A2P04920 1241 aa13.51□□□□□ -0.25
SMARCA2-210ENST00000416751 ABCB7O75027 752 aa13.44□□□□□ -0.26
SMARCA2-210ENST00000416751 TRHP20396 242 aaPredicted RBP13.44□□□□□ -0.26
SMARCA2-210ENST00000416751 ZNF219Q9P2Y4 722 aaPredicted RBP13.3□□□□□ -0.28
SMARCA2-210ENST00000416751 APLP2Q06481 763 aa13.25□□□□□ -0.29
SMARCA2-210ENST00000416751 MYCNP04198 464 aaPredicted RBP13.23□□□□□ -0.29
SMARCA2-210ENST00000416751 CHRDL2Q6WN34 429 aa13.2□□□□□ -0.3
SMARCA2-210ENST00000416751 RBM42Q9BTD8 480 aaKnown RBP13.2□□□□□ -0.3
SMARCA2-210ENST00000416751 ATXN8OSP0DMR3 200 aa13.09□□□□□ -0.31
SMARCA2-210ENST00000416751 SP7Q8TDD2 431 aaPredicted RBP13.09□□□□□ -0.31
SMARCA2-210ENST00000416751 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.07□□□□□ -0.32
SMARCA2-210ENST00000416751 HNRNPUL2Q1KMD3 747 aaKnown RBP13.07□□□□□ -0.32
SMARCA2-210ENST00000416751 SAMD1Q6SPF0 538 aaPredicted RBP12.96□□□□□ -0.33
SMARCA2-210ENST00000416751 ATF5Q9Y2D1 282 aaPredicted RBP12.91□□□□□ -0.34
SMARCA2-210ENST00000416751 POLA2Q14181 598 aa12.88□□□□□ -0.35
SMARCA2-210ENST00000416751 HAX1O00165 279 aa12.77□□□□□ -0.37
SMARCA2-210ENST00000416751 AKT1S1Q96B36 256 aa12.75□□□□□ -0.37
SMARCA2-210ENST00000416751 PIP4P2Q8N4L2 257 aa12.74□□□□□ -0.37
SMARCA2-210ENST00000416751 REM2Q8IYK8 340 aaPredicted RBP12.65□□□□□ -0.38
SMARCA2-210ENST00000416751 PITPNM1O00562 1244 aa12.53□□□□□ -0.4
SMARCA2-210ENST00000416751 FXR2P51116 673 aaKnown RBP eCLIP12.52□□□□□ -0.41
SMARCA2-210ENST00000416751 EVX2Q03828 476 aa12.52□□□□□ -0.41
SMARCA2-210ENST00000416751 FKBP8Q14318 412 aa12.5□□□□□ -0.41
SMARCA2-210ENST00000416751 ZBTB12Q9Y330 459 aaPredicted RBP12.49□□□□□ -0.41
SMARCA2-210ENST00000416751 OSCARQ8IYS5 282 aa12.48□□□□□ -0.41
SMARCA2-210ENST00000416751 MKRN4PQ13434 485 aaPredicted RBP12.38□□□□□ -0.43
SMARCA2-210ENST00000416751 LHX8Q68G74 356 aa12.3□□□□□ -0.44
SMARCA2-210ENST00000416751 PRKAR2AP13861 404 aaKnown RBP12.22□□□□□ -0.45
SMARCA2-210ENST00000416751 FBLN2P98095 1184 aa12.2□□□□□ -0.46
SMARCA2-210ENST00000416751 GABBR2O75899 941 aa12.19□□□□□ -0.46
SMARCA2-210ENST00000416751 PLSCR2Q9NRY7 297 aa12.18□□□□□ -0.46
SMARCA2-210ENST00000416751 SPDYE4A6NLX3 237 aa12.17□□□□□ -0.46
SMARCA2-210ENST00000416751 CLEC11AQ9Y240 323 aa12.16□□□□□ -0.46
SMARCA2-210ENST00000416751 C19orf67A6NJJ6 358 aa12.15□□□□□ -0.46
SMARCA2-210ENST00000416751 PROM2Q8N271 834 aa12.15□□□□□ -0.46
SMARCA2-210ENST00000416751 SPDYE2BA6NHP3 402 aa12.06□□□□□ -0.48
SMARCA2-210ENST00000416751 SPDYE6P0CI01 402 aa12.06□□□□□ -0.48
SMARCA2-210ENST00000416751 SPDYE2Q495Y8 402 aa12.06□□□□□ -0.48
SMARCA2-210ENST00000416751 SPDYE1Q8NFV5 336 aaPredicted RBP12.05□□□□□ -0.48
SMARCA2-210ENST00000416751 RTN4Q9NQC3 1192 aaKnown RBP12.02□□□□□ -0.49
SMARCA2-210ENST00000416751 AMER1Q5JTC6 1135 aaPredicted RBP11.99□□□□□ -0.49
SMARCA2-210ENST00000416751 CHADLQ6NUI6 762 aa11.97□□□□□ -0.49
SMARCA2-210ENST00000416751 FBXO3Q9UK99 471 aa11.92□□□□□ -0.5
SMARCA2-210ENST00000416751 NISCHQ9Y2I1 1504 aa11.91□□□□□ -0.5
SMARCA2-210ENST00000416751 POTEIP0CG38 1075 aa11.9□□□□□ -0.5
SMARCA2-210ENST00000416751 SSUH2Q9Y2M2 353 aa11.89□□□□□ -0.51
SMARCA2-210ENST00000416751 ZNF692Q9BU19 519 aaPredicted RBP11.88□□□□□ -0.51
SMARCA2-210ENST00000416751 VASPP50552 380 aaPredicted RBP11.83□□□□□ -0.52
SMARCA2-210ENST00000416751 PRR29P0C7W0 189 aa11.81□□□□□ -0.52
SMARCA2-210ENST00000416751 CD44P16070 742 aaKnown RBP11.79□□□□□ -0.52
SMARCA2-210ENST00000416751 ABCC9O60706 1549 aa11.76□□□□□ -0.53
SMARCA2-210ENST00000416751 DCBLD2Q96PD2 775 aa11.75□□□□□ -0.53
SMARCA2-210ENST00000416751 IFNLR1Q8IU57 520 aaPredicted RBP11.72□□□□□ -0.53
SMARCA2-210ENST00000416751 PABPN1Q86U42 306 aaKnown RBP eCLIP11.71□□□□□ -0.53
SMARCA2-210ENST00000416751 CLCN6P51797 869 aa11.68□□□□□ -0.54
SMARCA2-210ENST00000416751 FARP1Q9Y4F1 1045 aaPredicted RBP11.66□□□□□ -0.54
SMARCA2-210ENST00000416751 POTEMA6NI47 508 aa11.62□□□□□ -0.55
SMARCA2-210ENST00000416751 STAG3Q9UJ98 1225 aa11.62□□□□□ -0.55
SMARCA2-210ENST00000416751 OTUD5Q96G74 571 aa11.6□□□□□ -0.55
SMARCA2-210ENST00000416751 POTEGQ6S5H5 508 aa11.56□□□□□ -0.56
SMARCA2-210ENST00000416751 ZRANB1Q9UGI0 708 aa11.54□□□□□ -0.56
SMARCA2-210ENST00000416751 POTEB2H3BUK9 544 aa11.51□□□□□ -0.57
SMARCA2-210ENST00000416751 ZNF579Q8NAF0 562 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms