RNA–Protein interactions for RNA: ENST00000382149.8

KCNIP4-203, Transcript of potassium voltage-gated channel interacting protein 4, humanhuman

TSL 1 (best)

Gene KCNIP4, Length 868 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4-203ENST00000382149 AEBP2Q6ZN18 517 aaPredicted RBP22.79■■□□□ 1.24
KCNIP4-203ENST00000382149 CHIC1Q5VXU3 224 aa21.54■■□□□ 1.04
KCNIP4-203ENST00000382149 SENP3Q9H4L4 574 aaPredicted RBP19.29■□□□□ 0.68
KCNIP4-203ENST00000382149 PHF23Q9BUL5 403 aaPredicted RBP19.11■□□□□ 0.65
KCNIP4-203ENST00000382149 FOXD1Q16676 465 aa18.07■□□□□ 0.48
KCNIP4-203ENST00000382149 PLPPR3Q6T4P5 718 aa17.16■□□□□ 0.34
KCNIP4-203ENST00000382149 PPP6R1Q9UPN7 881 aa16.95■□□□□ 0.3
KCNIP4-203ENST00000382149 ADRA2BP18089 450 aa16.88■□□□□ 0.29
KCNIP4-203ENST00000382149 PIAS4Q8N2W9 510 aaPredicted RBP16.85■□□□□ 0.29
KCNIP4-203ENST00000382149 MSH5O43196 834 aa16.81■□□□□ 0.28
KCNIP4-203ENST00000382149 POTEDQ86YR6 584 aa16.51■□□□□ 0.23
KCNIP4-203ENST00000382149 MAPK8IP2Q13387 824 aaPredicted RBP15.53■□□□□ 0.08
KCNIP4-203ENST00000382149 DMRT2Q9Y5R5 561 aa15.33■□□□□ 0.04
KCNIP4-203ENST00000382149 SCAF1Q9H7N4 1312 aaKnown RBP15.26■□□□□ 0.03
KCNIP4-203ENST00000382149 PPP4R3CPQ6ZMV5 832 aa15.08■□□□□ 0
KCNIP4-203ENST00000382149 HOXD11P31277 338 aaPredicted RBP14.76□□□□□ -0.05
KCNIP4-203ENST00000382149 CNKSR2Q8WXI2 1034 aa14.76□□□□□ -0.05
KCNIP4-203ENST00000382149 DCAF8L1A6NGE4 600 aa14.71□□□□□ -0.05
KCNIP4-203ENST00000382149 RNF216Q9NWF9 866 aaPredicted RBP14.63□□□□□ -0.07
KCNIP4-203ENST00000382149 CACNB1Q02641 598 aaPredicted RBP14.47□□□□□ -0.09
KCNIP4-203ENST00000382149 NCBP3Q53F19 620 aaKnown RBP14.41□□□□□ -0.1
KCNIP4-203ENST00000382149 RNF39Q9H2S5 420 aa14.41□□□□□ -0.1
KCNIP4-203ENST00000382149 NPM3O75607 178 aaKnown RBP14.32□□□□□ -0.12
KCNIP4-203ENST00000382149 KCNA4P22459 653 aa14.25□□□□□ -0.13
KCNIP4-203ENST00000382149 DNAJC5BQ9UF47 199 aa14.17□□□□□ -0.14
KCNIP4-203ENST00000382149 C1QBPQ07021 282 aaKnown RBP14.13□□□□□ -0.15
KCNIP4-203ENST00000382149 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.05□□□□□ -0.16
KCNIP4-203ENST00000382149 U3KPZ7 1027 aaPredicted RBP13.82□□□□□ -0.2
KCNIP4-203ENST00000382149 SLC4A2P04920 1241 aa13.72□□□□□ -0.21
KCNIP4-203ENST00000382149 SPINK5Q9NQ38 1064 aaPredicted RBP13.65□□□□□ -0.22
KCNIP4-203ENST00000382149 SLC4A1APQ9BWU0 796 aaKnown RBP13.56□□□□□ -0.24
KCNIP4-203ENST00000382149 CAPN15O75808 1086 aa13.55□□□□□ -0.24
KCNIP4-203ENST00000382149 DSG3P32926 999 aa13.5□□□□□ -0.25
KCNIP4-203ENST00000382149 TRHP20396 242 aaPredicted RBP13.36□□□□□ -0.27
KCNIP4-203ENST00000382149 ABCB7O75027 752 aa13.3□□□□□ -0.28
KCNIP4-203ENST00000382149 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.27□□□□□ -0.29
KCNIP4-203ENST00000382149 HNRNPUL2Q1KMD3 747 aaKnown RBP13.27□□□□□ -0.29
KCNIP4-203ENST00000382149 ZNF219Q9P2Y4 722 aaPredicted RBP13.26□□□□□ -0.29
KCNIP4-203ENST00000382149 APLP2Q06481 763 aa13.24□□□□□ -0.29
KCNIP4-203ENST00000382149 SAMD1Q6SPF0 538 aaPredicted RBP13.24□□□□□ -0.29
KCNIP4-203ENST00000382149 FOXD4L1Q9NU39 408 aa13.2□□□□□ -0.3
KCNIP4-203ENST00000382149 MYCNP04198 464 aaPredicted RBP13.18□□□□□ -0.3
KCNIP4-203ENST00000382149 ZBTB22O15209 634 aa13.08□□□□□ -0.32
KCNIP4-203ENST00000382149 ATF5Q9Y2D1 282 aaPredicted RBP13.01□□□□□ -0.33
KCNIP4-203ENST00000382149 POLA2Q14181 598 aa12.99□□□□□ -0.33
KCNIP4-203ENST00000382149 EHMT2Q96KQ7 1210 aa12.94□□□□□ -0.34
KCNIP4-203ENST00000382149 CSRNP3Q8WYN3 585 aa12.93□□□□□ -0.34
KCNIP4-203ENST00000382149 POTEHQ6S545 545 aa12.91□□□□□ -0.34
KCNIP4-203ENST00000382149 ATXN8OSP0DMR3 200 aa12.81□□□□□ -0.36
KCNIP4-203ENST00000382149 RBM42Q9BTD8 480 aaKnown RBP12.77□□□□□ -0.37
KCNIP4-203ENST00000382149 OSCARQ8IYS5 282 aa12.61□□□□□ -0.39
KCNIP4-203ENST00000382149 ZBTB12Q9Y330 459 aaPredicted RBP12.61□□□□□ -0.39
KCNIP4-203ENST00000382149 CHRDL2Q6WN34 429 aa12.58□□□□□ -0.4
KCNIP4-203ENST00000382149 AKT1S1Q96B36 256 aa12.52□□□□□ -0.41
KCNIP4-203ENST00000382149 REM2Q8IYK8 340 aaPredicted RBP12.45□□□□□ -0.42
KCNIP4-203ENST00000382149 MKRN4PQ13434 485 aaPredicted RBP12.39□□□□□ -0.43
KCNIP4-203ENST00000382149 PITPNM1O00562 1244 aa12.35□□□□□ -0.43
KCNIP4-203ENST00000382149 FBLN2P98095 1184 aa12.34□□□□□ -0.43
KCNIP4-203ENST00000382149 PIP4P2Q8N4L2 257 aa12.31□□□□□ -0.44
KCNIP4-203ENST00000382149 SPDYE2BA6NHP3 402 aa12.28□□□□□ -0.44
KCNIP4-203ENST00000382149 SPDYE6P0CI01 402 aa12.28□□□□□ -0.44
KCNIP4-203ENST00000382149 SPDYE2Q495Y8 402 aa12.28□□□□□ -0.44
KCNIP4-203ENST00000382149 FXR2P51116 673 aaKnown RBP eCLIP12.21□□□□□ -0.45
KCNIP4-203ENST00000382149 SSUH2Q9Y2M2 353 aa12.17□□□□□ -0.46
KCNIP4-203ENST00000382149 ZNF692Q9BU19 519 aaPredicted RBP12.16□□□□□ -0.46
KCNIP4-203ENST00000382149 SP7Q8TDD2 431 aaPredicted RBP12.09□□□□□ -0.47
KCNIP4-203ENST00000382149 CLEC11AQ9Y240 323 aa12.09□□□□□ -0.47
KCNIP4-203ENST00000382149 SPDYE1Q8NFV5 336 aaPredicted RBP12.06□□□□□ -0.48
KCNIP4-203ENST00000382149 HAX1O00165 279 aa12.05□□□□□ -0.48
KCNIP4-203ENST00000382149 EVX2Q03828 476 aa12.01□□□□□ -0.49
KCNIP4-203ENST00000382149 PABPN1Q86U42 306 aaKnown RBP eCLIP12□□□□□ -0.49
KCNIP4-203ENST00000382149 PRKAR2AP13861 404 aaKnown RBP11.99□□□□□ -0.49
KCNIP4-203ENST00000382149 CHADLQ6NUI6 762 aa11.92□□□□□ -0.5
KCNIP4-203ENST00000382149 PRR29P0C7W0 189 aa11.86□□□□□ -0.51
KCNIP4-203ENST00000382149 SPDYE4A6NLX3 237 aa11.83□□□□□ -0.52
KCNIP4-203ENST00000382149 C19orf67A6NJJ6 358 aa11.82□□□□□ -0.52
KCNIP4-203ENST00000382149 FARP1Q9Y4F1 1045 aaPredicted RBP11.69□□□□□ -0.54
KCNIP4-203ENST00000382149 FKBP8Q14318 412 aa11.68□□□□□ -0.54
KCNIP4-203ENST00000382149 GABBR2O75899 941 aa11.66□□□□□ -0.54
KCNIP4-203ENST00000382149 PROM2Q8N271 834 aa11.66□□□□□ -0.54
KCNIP4-203ENST00000382149 CREBZFQ9NS37 354 aa11.63□□□□□ -0.55
KCNIP4-203ENST00000382149 CD44P16070 742 aaKnown RBP11.61□□□□□ -0.55
KCNIP4-203ENST00000382149 STAG3Q9UJ98 1225 aa11.59□□□□□ -0.55
KCNIP4-203ENST00000382149 POTEIP0CG38 1075 aa11.48□□□□□ -0.57
KCNIP4-203ENST00000382149 MNX1P50219 401 aaPredicted RBP11.45□□□□□ -0.58
KCNIP4-203ENST00000382149 ZRANB1Q9UGI0 708 aa11.45□□□□□ -0.58
KCNIP4-203ENST00000382149 ZNF579Q8NAF0 562 aaKnown RBP11.43□□□□□ -0.58
KCNIP4-203ENST00000382149 FBXO3Q9UK99 471 aa11.38□□□□□ -0.59
KCNIP4-203ENST00000382149 PHF12Q96QT6 1004 aa11.35□□□□□ -0.59
KCNIP4-203ENST00000382149 GALR2O43603 387 aaPredicted RBP11.34□□□□□ -0.59
KCNIP4-203ENST00000382149 LHX8Q68G74 356 aa11.34□□□□□ -0.59
KCNIP4-203ENST00000382149 CLCN6P51797 869 aa11.32□□□□□ -0.6
KCNIP4-203ENST00000382149 NPM1P06748 294 aaKnown RBP eCLIP11.3□□□□□ -0.6
KCNIP4-203ENST00000382149 DCBLD2Q96PD2 775 aa11.29□□□□□ -0.6
KCNIP4-203ENST00000382149 PAK3O75914 559 aaPredicted RBP11.27□□□□□ -0.61
KCNIP4-203ENST00000382149 NISCHQ9Y2I1 1504 aa11.25□□□□□ -0.61
KCNIP4-203ENST00000382149 PLEKHG5O94827 1062 aa11.24□□□□□ -0.61
KCNIP4-203ENST00000382149 MIER1Q8N108 512 aa11.23□□□□□ -0.61
KCNIP4-203ENST00000382149 PLCD3Q8N3E9 789 aa11.2□□□□□ -0.62
KCNIP4-203ENST00000382149 TSPYL2Q9H2G4 693 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms