RNA–Protein interactions for RNA: ENSMUST00000228550.1

Pkd1-207, Transcript of Polycystin-1, mousemouse

BASIC

Gene Pkd1, Length 1,050 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1-207ENSMUST00000228550 Gm35339A0A140LHH9 1649 aa52,38■■■■■ 5,98
Pkd1-207ENSMUST00000228550 NischQ80TM9 1593 aa51,63■■■■■ 5,86
Pkd1-207ENSMUST00000228550 Abcc9P70170 1546 aa49,95■■■■■ 5,59
Pkd1-207ENSMUST00000228550 Abcc8B2RUS7 1588 aa49,92■■■■■ 5,58
Pkd1-207ENSMUST00000228550 ScribQ80U72 1612 aa48,24■■■■■ 5,31
Pkd1-207ENSMUST00000228550 NacadQ5SWP3 1504 aa46,69■■■■■ 5,07
Pkd1-207ENSMUST00000228550 Kdm5dQ62240 1548 aa46,62■■■■■ 5,05
Pkd1-207ENSMUST00000228550 Dcaf1Q80TR8 1506 aa45,88■■■■■ 4,94
Pkd1-207ENSMUST00000228550 Sycp2Q9CUU3 1500 aa45,77■■■■■ 4,92
Pkd1-207ENSMUST00000228550 BicraF8VPZ9 1578 aa45,16■■■■■ 4,82
Pkd1-207ENSMUST00000228550 Rb1cc1Q9ESK9 1588 aa45,03■■■■■ 4,8
Pkd1-207ENSMUST00000228550 Rhox8Q6VSS7 320 aa44,53■■■■■ 4,72
Pkd1-207ENSMUST00000228550 Ccdc180J3QNE4 1664 aa44,37■■■■■ 4,69
Pkd1-207ENSMUST00000228550 Baz1aO88379 1555 aa44,36■■■■■ 4,69
Pkd1-207ENSMUST00000228550 Crybg2B7ZCC2 1516 aa44,16■■■■■ 4,66
Pkd1-207ENSMUST00000228550 Dnajc5bQ9CQ94 199 aa44,02■■■■■ 4,64
Pkd1-207ENSMUST00000228550 Pds5bQ4VA53 1446 aaKnown RBP43,94■■■■■ 4,62
Pkd1-207ENSMUST00000228550 Zcchc6Q5BLK4 1491 aaKnown RBP43,75■■■■■ 4,59
Pkd1-207ENSMUST00000228550 Thoc2B1AZI6 1594 aaKnown RBP43,63■■■■■ 4,57
Pkd1-207ENSMUST00000228550 Atad2bE9Q166 1460 aaKnown RBP43,48■■■■■ 4,55
Pkd1-207ENSMUST00000228550 Smarca4Q3TKT4 1613 aaKnown RBP43,12■■■■■ 4,49
Pkd1-207ENSMUST00000228550 Ercc6F8VPZ5 1481 aa43,05■■■■■ 4,48
Pkd1-207ENSMUST00000228550 Smarca2Q6DIC0 1577 aa43,04■■■■■ 4,48
Pkd1-207ENSMUST00000228550 Cc2d2aQ8CFW7 1633 aa42,93■■■■■ 4,46
Pkd1-207ENSMUST00000228550 Cecr2E9Q2Z1 1453 aa42,93■■■■■ 4,46
Pkd1-207ENSMUST00000228550 Iqgap2Q3UQ44 1575 aa42,9■■■■■ 4,46
Pkd1-207ENSMUST00000228550 Fam135aQ6NS59 1506 aa42,61■■■■■ 4,41
Pkd1-207ENSMUST00000228550 Wdr62Q3U3T8 1523 aa42,55■■■■■ 4,4
Pkd1-207ENSMUST00000228550 Frmpd1A2AKB4 1549 aa42,46■■■■■ 4,39
Pkd1-207ENSMUST00000228550 Rtl1Q7M732 1744 aa42,41■■■■■ 4,38
Pkd1-207ENSMUST00000228550 Phldb1Q6PDH0 1371 aaKnown RBP42,26■■■■■ 4,35
Pkd1-207ENSMUST00000228550 Baz1bQ9Z277 1479 aa42,1■■■■■ 4,33
Pkd1-207ENSMUST00000228550 Unc13aQ4KUS2 1712 aa41,98■■■■■ 4,31
Pkd1-207ENSMUST00000228550 Cttnbp2B9EJA2 1648 aa41,96■■■■■ 4,31
Pkd1-207ENSMUST00000228550 CftrP26361 1476 aa41,93■■■■■ 4,3
Pkd1-207ENSMUST00000228550 Ubl4bQ9CQ84 188 aa41,88■■■■■ 4,29
Pkd1-207ENSMUST00000228550 Synj1Q8CHC4 1574 aa41,88■■■■■ 4,29
Pkd1-207ENSMUST00000228550 Brd4Q9ESU6 1400 aaKnown RBP41,82■■■■■ 4,29
Pkd1-207ENSMUST00000228550 Ccdc136Q3TVA9 1136 aa41,68■■■■■ 4,26
Pkd1-207ENSMUST00000228550 Mrc2Q64449 1479 aa41,62■■■■■ 4,25
Pkd1-207ENSMUST00000228550 Esf1Q3V1V3 845 aaKnown RBP41,25■■■■■ 4,19
Pkd1-207ENSMUST00000228550 Trim41Q5NCC3 630 aa41,03■■■■■ 4,16
Pkd1-207ENSMUST00000228550 Rsf1E9PWW9 1441 aaKnown RBP41,01■■■■■ 4,15
Pkd1-207ENSMUST00000228550 Kif15Q6P9L6 1387 aa40,93■■■■■ 4,14
Pkd1-207ENSMUST00000228550 Cux2P70298 1426 aa40,93■■■■■ 4,14
Pkd1-207ENSMUST00000228550 Lrriq1Q0P5X1 1673 aa40,76■■■■■ 4,12
Pkd1-207ENSMUST00000228550 Lamc3Q9R0B6 1581 aa40,76■■■■■ 4,12
Pkd1-207ENSMUST00000228550 Kif21aQ9QXL2 1672 aa40,69■■■■■ 4,1
Pkd1-207ENSMUST00000228550 Npm1Q61937 292 aaKnown RBP40,5■■■■■ 4,07
Pkd1-207ENSMUST00000228550 Cep164Q5DU05 1446 aa40,37■■■■■ 4,05
Pkd1-207ENSMUST00000228550 Top2bQ64511 1612 aa40,31■■■■■ 4,04
Pkd1-207ENSMUST00000228550 Golga3P55937 1487 aa40,31■■■■■ 4,04
Pkd1-207ENSMUST00000228550 TnnQ80Z71 1560 aa40,28■■■■■ 4,04
Pkd1-207ENSMUST00000228550 Ccdc18Q640L5 1455 aa40,19■■■■■ 4,02
Pkd1-207ENSMUST00000228550 Eif4g3Q80XI3 1579 aaKnown RBP40,18■■■■■ 4,02
Pkd1-207ENSMUST00000228550 Cngb1E1AZ71 1325 aa40,17■■■■■ 4,02
Pkd1-207ENSMUST00000228550 Il27Q8K3I6 234 aa40,1■■■■■ 4,01
Pkd1-207ENSMUST00000228550 Dhx29Q6PGC1 1365 aaKnown RBP40,05■■■■■ 4
Pkd1-207ENSMUST00000228550 Camsap1A2AHC3 1581 aa40,04■■■■■ 4
Pkd1-207ENSMUST00000228550 Urb2E9Q7L1 1524 aaKnown RBP40,01■■■■□ 3,99
Pkd1-207ENSMUST00000228550 Dnajc5P60904 198 aa39,98■■■■□ 3,99
Pkd1-207ENSMUST00000228550 LrpprcQ6PB66 1392 aaKnown RBP39,96■■■■□ 3,99
Pkd1-207ENSMUST00000228550 Plb1Q3TTY0 1478 aa39,94■■■■□ 3,98
Pkd1-207ENSMUST00000228550 Crocc2F6XLV1 1638 aa39,91■■■■□ 3,98
Pkd1-207ENSMUST00000228550 Fmn1Q05860 1466 aa39,89■■■■□ 3,98
Pkd1-207ENSMUST00000228550 PogzQ8BZH4 1409 aaKnown RBP39,72■■■■□ 3,95
Pkd1-207ENSMUST00000228550 Shroom2A2ALU4 1481 aa39,68■■■■□ 3,94
Pkd1-207ENSMUST00000228550 Ift140E9PY46 1464 aa39,6■■■■□ 3,93
Pkd1-207ENSMUST00000228550 Duox2A2AQ99 1517 aa39,54■■■■□ 3,92
Pkd1-207ENSMUST00000228550 Rusc2Q80U22 1514 aa39,5■■■■□ 3,91
Pkd1-207ENSMUST00000228550 Grin2bQ01097 1482 aa39,46■■■■□ 3,91
Pkd1-207ENSMUST00000228550 Disp1Q3TDN0 1521 aa39,27■■■■□ 3,88
Pkd1-207ENSMUST00000228550 Pabpn1Q8CCS6 302 aaKnown RBP39,27■■■■□ 3,88
Pkd1-207ENSMUST00000228550 Samd9lQ69Z37 1561 aa39,25■■■■□ 3,87
Pkd1-207ENSMUST00000228550 Pbrm1Q8BSQ9 1634 aaKnown RBP39,21■■■■□ 3,87
Pkd1-207ENSMUST00000228550 Efcab5A0JP43 1406 aa39,19■■■■□ 3,86
Pkd1-207ENSMUST00000228550 Setd1bQ8CFT2 1985 aa39,18■■■■□ 3,86
Pkd1-207ENSMUST00000228550 Ccdc88bQ4QRL3 1481 aa39,17■■■■□ 3,86
Pkd1-207ENSMUST00000228550 Col17a1Q07563 1470 aa39,13■■■■□ 3,85
Pkd1-207ENSMUST00000228550 Nup160Q9Z0W3 1402 aaKnown RBP39,11■■■■□ 3,85
Pkd1-207ENSMUST00000228550 Top2aQ01320 1528 aaKnown RBP39,09■■■■□ 3,85
Pkd1-207ENSMUST00000228550 Pelp1Q9DBD5 1123 aaKnown RBP39,08■■■■□ 3,85
Pkd1-207ENSMUST00000228550 Cc2d2bA0A286YDU8 1405 aa39,07■■■■□ 3,85
Pkd1-207ENSMUST00000228550 NrkQ9R0G8 1455 aa38,99■■■■□ 3,83
Pkd1-207ENSMUST00000228550 Rad54l2Q99NG0 1466 aa38,98■■■■□ 3,83
Pkd1-207ENSMUST00000228550 Grin2aP35436 1464 aa38,89■■■■□ 3,82
Pkd1-207ENSMUST00000228550 Chic1Q8CBW7 227 aa38,87■■■■□ 3,81
Pkd1-207ENSMUST00000228550 Magi3Q9EQJ9 1476 aa38,86■■■■□ 3,81
Pkd1-207ENSMUST00000228550 Shroom4Q1W617 1475 aa38,82■■■■□ 3,81
Pkd1-207ENSMUST00000228550 AqrQ8CFQ3 1481 aaKnown RBP38,81■■■■□ 3,8
Pkd1-207ENSMUST00000228550 Zcchc11B2RX14 1644 aaKnown RBP38,8■■■■□ 3,8
Pkd1-207ENSMUST00000228550 PtprkP35822 1457 aa38,76■■■■□ 3,8
Pkd1-207ENSMUST00000228550 SynmQ70IV5 1561 aa38,68■■■■□ 3,78
Pkd1-207ENSMUST00000228550 Fgd6Q69ZL1 1399 aa38,67■■■■□ 3,78
Pkd1-207ENSMUST00000228550 Pla2r1Q62028 1487 aa38,63■■■■□ 3,77
Pkd1-207ENSMUST00000228550 Gpatch8A2A6A1 1505 aa38,63■■■■□ 3,77
Pkd1-207ENSMUST00000228550 Zeb1Q64318 1117 aa38,53■■■■□ 3,76
Pkd1-207ENSMUST00000228550 AknaQ80VW7 1404 aa38,44■■■■□ 3,74
Pkd1-207ENSMUST00000228550 Cep170Q6A065 1588 aa38,4■■■■□ 3,74
Pkd1-207ENSMUST00000228550 Gapvd1Q6PAR5 1458 aa38,4■■■■□ 3,74
Retrieved 100 of 22,080 RNA–protein pairs in 9,7 ms