RNA–Protein interactions for RNA: ENSMUST00000228550.1

Pkd1-207, Transcript of Polycystin-1, mousemouse

BASIC

Gene Pkd1, Length 1,050 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1-207ENSMUST00000228550 Gm35339A0A140LHH9 1649 aa52.38■■■■■ 5.98
Pkd1-207ENSMUST00000228550 NischQ80TM9 1593 aa51.63■■■■■ 5.86
Pkd1-207ENSMUST00000228550 Abcc9P70170 1546 aa49.95■■■■■ 5.59
Pkd1-207ENSMUST00000228550 Abcc8B2RUS7 1588 aa49.92■■■■■ 5.58
Pkd1-207ENSMUST00000228550 ScribQ80U72 1612 aa48.24■■■■■ 5.31
Pkd1-207ENSMUST00000228550 NacadQ5SWP3 1504 aa46.69■■■■■ 5.07
Pkd1-207ENSMUST00000228550 Kdm5dQ62240 1548 aa46.62■■■■■ 5.05
Pkd1-207ENSMUST00000228550 Dcaf1Q80TR8 1506 aa45.88■■■■■ 4.94
Pkd1-207ENSMUST00000228550 Sycp2Q9CUU3 1500 aa45.77■■■■■ 4.92
Pkd1-207ENSMUST00000228550 BicraF8VPZ9 1578 aa45.16■■■■■ 4.82
Pkd1-207ENSMUST00000228550 Rb1cc1Q9ESK9 1588 aa45.03■■■■■ 4.8
Pkd1-207ENSMUST00000228550 Rhox8Q6VSS7 320 aa44.53■■■■■ 4.72
Pkd1-207ENSMUST00000228550 Ccdc180J3QNE4 1664 aa44.37■■■■■ 4.69
Pkd1-207ENSMUST00000228550 Baz1aO88379 1555 aa44.36■■■■■ 4.69
Pkd1-207ENSMUST00000228550 Crybg2B7ZCC2 1516 aa44.16■■■■■ 4.66
Pkd1-207ENSMUST00000228550 Dnajc5bQ9CQ94 199 aa44.02■■■■■ 4.64
Pkd1-207ENSMUST00000228550 Pds5bQ4VA53 1446 aaKnown RBP43.94■■■■■ 4.62
Pkd1-207ENSMUST00000228550 Zcchc6Q5BLK4 1491 aaKnown RBP43.75■■■■■ 4.59
Pkd1-207ENSMUST00000228550 Thoc2B1AZI6 1594 aaKnown RBP43.63■■■■■ 4.57
Pkd1-207ENSMUST00000228550 Atad2bE9Q166 1460 aaKnown RBP43.48■■■■■ 4.55
Pkd1-207ENSMUST00000228550 Smarca4Q3TKT4 1613 aaKnown RBP43.12■■■■■ 4.49
Pkd1-207ENSMUST00000228550 Ercc6F8VPZ5 1481 aa43.05■■■■■ 4.48
Pkd1-207ENSMUST00000228550 Smarca2Q6DIC0 1577 aa43.04■■■■■ 4.48
Pkd1-207ENSMUST00000228550 Cc2d2aQ8CFW7 1633 aa42.93■■■■■ 4.46
Pkd1-207ENSMUST00000228550 Cecr2E9Q2Z1 1453 aa42.93■■■■■ 4.46
Pkd1-207ENSMUST00000228550 Iqgap2Q3UQ44 1575 aa42.9■■■■■ 4.46
Pkd1-207ENSMUST00000228550 Fam135aQ6NS59 1506 aa42.61■■■■■ 4.41
Pkd1-207ENSMUST00000228550 Wdr62Q3U3T8 1523 aa42.55■■■■■ 4.4
Pkd1-207ENSMUST00000228550 Frmpd1A2AKB4 1549 aa42.46■■■■■ 4.39
Pkd1-207ENSMUST00000228550 Rtl1Q7M732 1744 aa42.41■■■■■ 4.38
Pkd1-207ENSMUST00000228550 Phldb1Q6PDH0 1371 aaKnown RBP42.26■■■■■ 4.35
Pkd1-207ENSMUST00000228550 Baz1bQ9Z277 1479 aa42.1■■■■■ 4.33
Pkd1-207ENSMUST00000228550 Unc13aQ4KUS2 1712 aa41.98■■■■■ 4.31
Pkd1-207ENSMUST00000228550 Cttnbp2B9EJA2 1648 aa41.96■■■■■ 4.31
Pkd1-207ENSMUST00000228550 CftrP26361 1476 aa41.93■■■■■ 4.3
Pkd1-207ENSMUST00000228550 Ubl4bQ9CQ84 188 aa41.88■■■■■ 4.29
Pkd1-207ENSMUST00000228550 Synj1Q8CHC4 1574 aa41.88■■■■■ 4.29
Pkd1-207ENSMUST00000228550 Brd4Q9ESU6 1400 aaKnown RBP41.82■■■■■ 4.29
Pkd1-207ENSMUST00000228550 Ccdc136Q3TVA9 1136 aa41.68■■■■■ 4.26
Pkd1-207ENSMUST00000228550 Mrc2Q64449 1479 aa41.62■■■■■ 4.25
Pkd1-207ENSMUST00000228550 Esf1Q3V1V3 845 aaKnown RBP41.25■■■■■ 4.19
Pkd1-207ENSMUST00000228550 Trim41Q5NCC3 630 aa41.03■■■■■ 4.16
Pkd1-207ENSMUST00000228550 Rsf1E9PWW9 1441 aaKnown RBP41.01■■■■■ 4.15
Pkd1-207ENSMUST00000228550 Kif15Q6P9L6 1387 aa40.93■■■■■ 4.14
Pkd1-207ENSMUST00000228550 Cux2P70298 1426 aa40.93■■■■■ 4.14
Pkd1-207ENSMUST00000228550 Lrriq1Q0P5X1 1673 aa40.76■■■■■ 4.12
Pkd1-207ENSMUST00000228550 Lamc3Q9R0B6 1581 aa40.76■■■■■ 4.12
Pkd1-207ENSMUST00000228550 Kif21aQ9QXL2 1672 aa40.69■■■■■ 4.1
Pkd1-207ENSMUST00000228550 Npm1Q61937 292 aaKnown RBP40.5■■■■■ 4.07
Pkd1-207ENSMUST00000228550 Cep164Q5DU05 1446 aa40.37■■■■■ 4.05
Pkd1-207ENSMUST00000228550 Top2bQ64511 1612 aa40.31■■■■■ 4.04
Pkd1-207ENSMUST00000228550 Golga3P55937 1487 aa40.31■■■■■ 4.04
Pkd1-207ENSMUST00000228550 TnnQ80Z71 1560 aa40.28■■■■■ 4.04
Pkd1-207ENSMUST00000228550 Ccdc18Q640L5 1455 aa40.19■■■■■ 4.02
Pkd1-207ENSMUST00000228550 Eif4g3Q80XI3 1579 aaKnown RBP40.18■■■■■ 4.02
Pkd1-207ENSMUST00000228550 Cngb1E1AZ71 1325 aa40.17■■■■■ 4.02
Pkd1-207ENSMUST00000228550 Il27Q8K3I6 234 aa40.1■■■■■ 4.01
Pkd1-207ENSMUST00000228550 Dhx29Q6PGC1 1365 aaKnown RBP40.05■■■■■ 4
Pkd1-207ENSMUST00000228550 Camsap1A2AHC3 1581 aa40.04■■■■■ 4
Pkd1-207ENSMUST00000228550 Urb2E9Q7L1 1524 aaKnown RBP40.01■■■■□ 3.99
Pkd1-207ENSMUST00000228550 Dnajc5P60904 198 aa39.98■■■■□ 3.99
Pkd1-207ENSMUST00000228550 LrpprcQ6PB66 1392 aaKnown RBP39.96■■■■□ 3.99
Pkd1-207ENSMUST00000228550 Plb1Q3TTY0 1478 aa39.94■■■■□ 3.98
Pkd1-207ENSMUST00000228550 Crocc2F6XLV1 1638 aa39.91■■■■□ 3.98
Pkd1-207ENSMUST00000228550 Fmn1Q05860 1466 aa39.89■■■■□ 3.98
Pkd1-207ENSMUST00000228550 PogzQ8BZH4 1409 aaKnown RBP39.72■■■■□ 3.95
Pkd1-207ENSMUST00000228550 Shroom2A2ALU4 1481 aa39.68■■■■□ 3.94
Pkd1-207ENSMUST00000228550 Ift140E9PY46 1464 aa39.6■■■■□ 3.93
Pkd1-207ENSMUST00000228550 Duox2A2AQ99 1517 aa39.54■■■■□ 3.92
Pkd1-207ENSMUST00000228550 Rusc2Q80U22 1514 aa39.5■■■■□ 3.91
Pkd1-207ENSMUST00000228550 Grin2bQ01097 1482 aa39.46■■■■□ 3.91
Pkd1-207ENSMUST00000228550 Disp1Q3TDN0 1521 aa39.27■■■■□ 3.88
Pkd1-207ENSMUST00000228550 Pabpn1Q8CCS6 302 aaKnown RBP39.27■■■■□ 3.88
Pkd1-207ENSMUST00000228550 Samd9lQ69Z37 1561 aa39.25■■■■□ 3.87
Pkd1-207ENSMUST00000228550 Pbrm1Q8BSQ9 1634 aaKnown RBP39.21■■■■□ 3.87
Pkd1-207ENSMUST00000228550 Efcab5A0JP43 1406 aa39.19■■■■□ 3.86
Pkd1-207ENSMUST00000228550 Setd1bQ8CFT2 1985 aa39.18■■■■□ 3.86
Pkd1-207ENSMUST00000228550 Ccdc88bQ4QRL3 1481 aa39.17■■■■□ 3.86
Pkd1-207ENSMUST00000228550 Col17a1Q07563 1470 aa39.13■■■■□ 3.85
Pkd1-207ENSMUST00000228550 Nup160Q9Z0W3 1402 aaKnown RBP39.11■■■■□ 3.85
Pkd1-207ENSMUST00000228550 Top2aQ01320 1528 aaKnown RBP39.09■■■■□ 3.85
Pkd1-207ENSMUST00000228550 Pelp1Q9DBD5 1123 aaKnown RBP39.08■■■■□ 3.85
Pkd1-207ENSMUST00000228550 Cc2d2bA0A286YDU8 1405 aa39.07■■■■□ 3.85
Pkd1-207ENSMUST00000228550 NrkQ9R0G8 1455 aa38.99■■■■□ 3.83
Pkd1-207ENSMUST00000228550 Rad54l2Q99NG0 1466 aa38.98■■■■□ 3.83
Pkd1-207ENSMUST00000228550 Grin2aP35436 1464 aa38.89■■■■□ 3.82
Pkd1-207ENSMUST00000228550 Chic1Q8CBW7 227 aa38.87■■■■□ 3.81
Pkd1-207ENSMUST00000228550 Magi3Q9EQJ9 1476 aa38.86■■■■□ 3.81
Pkd1-207ENSMUST00000228550 Shroom4Q1W617 1475 aa38.82■■■■□ 3.81
Pkd1-207ENSMUST00000228550 AqrQ8CFQ3 1481 aaKnown RBP38.81■■■■□ 3.8
Pkd1-207ENSMUST00000228550 Zcchc11B2RX14 1644 aaKnown RBP38.8■■■■□ 3.8
Pkd1-207ENSMUST00000228550 PtprkP35822 1457 aa38.76■■■■□ 3.8
Pkd1-207ENSMUST00000228550 SynmQ70IV5 1561 aa38.68■■■■□ 3.78
Pkd1-207ENSMUST00000228550 Fgd6Q69ZL1 1399 aa38.67■■■■□ 3.78
Pkd1-207ENSMUST00000228550 Pla2r1Q62028 1487 aa38.63■■■■□ 3.77
Pkd1-207ENSMUST00000228550 Gpatch8A2A6A1 1505 aa38.63■■■■□ 3.77
Pkd1-207ENSMUST00000228550 Zeb1Q64318 1117 aa38.53■■■■□ 3.76
Pkd1-207ENSMUST00000228550 AknaQ80VW7 1404 aa38.44■■■■□ 3.74
Pkd1-207ENSMUST00000228550 Cep170Q6A065 1588 aa38.4■■■■□ 3.74
Pkd1-207ENSMUST00000228550 Gapvd1Q6PAR5 1458 aa38.4■■■■□ 3.74
Retrieved 100 of 22,080 RNA–protein pairs in 15.6 ms