RNA–Protein interactions for RNA: ENSMUST00000217518.1

Hmg20a-206, Transcript of High mobility group protein 20A, mousemouse

TSL 1 (best) BASIC

Gene Hmg20a, Length 2,468 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20a-206ENSMUST00000217518 Gm35339A0A140LHH9 1649 aa22.57■■□□□ 1.2
Hmg20a-206ENSMUST00000217518 NischQ80TM9 1593 aa22.11■■□□□ 1.13
Hmg20a-206ENSMUST00000217518 Abcc8B2RUS7 1588 aa21.51■■□□□ 1.03
Hmg20a-206ENSMUST00000217518 Abcc9P70170 1546 aa21.44■■□□□ 1.02
Hmg20a-206ENSMUST00000217518 ScribQ80U72 1612 aa20.98■□□□□ 0.95
Hmg20a-206ENSMUST00000217518 NacadQ5SWP3 1504 aa20.24■□□□□ 0.83
Hmg20a-206ENSMUST00000217518 Kdm5dQ62240 1548 aa20.18■□□□□ 0.82
Hmg20a-206ENSMUST00000217518 Rhox8Q6VSS7 320 aa20.07■□□□□ 0.8
Hmg20a-206ENSMUST00000217518 Sycp2Q9CUU3 1500 aa19.88■□□□□ 0.77
Hmg20a-206ENSMUST00000217518 Dnajc5bQ9CQ94 199 aa19.78■□□□□ 0.76
Hmg20a-206ENSMUST00000217518 Dcaf1Q80TR8 1506 aa19.7■□□□□ 0.74
Hmg20a-206ENSMUST00000217518 BicraF8VPZ9 1578 aa19.69■□□□□ 0.74
Hmg20a-206ENSMUST00000217518 Rb1cc1Q9ESK9 1588 aa19.22■□□□□ 0.67
Hmg20a-206ENSMUST00000217518 Thoc2B1AZI6 1594 aaKnown RBP19.18■□□□□ 0.66
Hmg20a-206ENSMUST00000217518 Pds5bQ4VA53 1446 aaKnown RBP19.18■□□□□ 0.66
Hmg20a-206ENSMUST00000217518 Atad2bE9Q166 1460 aaKnown RBP18.93■□□□□ 0.62
Hmg20a-206ENSMUST00000217518 Baz1aO88379 1555 aa18.92■□□□□ 0.62
Hmg20a-206ENSMUST00000217518 Crybg2B7ZCC2 1516 aa18.92■□□□□ 0.62
Hmg20a-206ENSMUST00000217518 Rtl1Q7M732 1744 aa18.86■□□□□ 0.61
Hmg20a-206ENSMUST00000217518 Cc2d2aQ8CFW7 1633 aa18.84■□□□□ 0.61
Hmg20a-206ENSMUST00000217518 Ccdc180J3QNE4 1664 aa18.81■□□□□ 0.6
Hmg20a-206ENSMUST00000217518 Ercc6F8VPZ5 1481 aa18.73■□□□□ 0.59
Hmg20a-206ENSMUST00000217518 Zcchc6Q5BLK4 1491 aaKnown RBP18.72■□□□□ 0.59
Hmg20a-206ENSMUST00000217518 Ccdc136Q3TVA9 1136 aa18.71■□□□□ 0.58
Hmg20a-206ENSMUST00000217518 Smarca2Q6DIC0 1577 aa18.67■□□□□ 0.58
Hmg20a-206ENSMUST00000217518 Fam135aQ6NS59 1506 aa18.66■□□□□ 0.58
Hmg20a-206ENSMUST00000217518 Smarca4Q3TKT4 1613 aaKnown RBP18.6■□□□□ 0.57
Hmg20a-206ENSMUST00000217518 Iqgap2Q3UQ44 1575 aa18.57■□□□□ 0.56
Hmg20a-206ENSMUST00000217518 Cecr2E9Q2Z1 1453 aa18.5■□□□□ 0.55
Hmg20a-206ENSMUST00000217518 Wdr62Q3U3T8 1523 aa18.48■□□□□ 0.55
Hmg20a-206ENSMUST00000217518 Frmpd1A2AKB4 1549 aa18.47■□□□□ 0.55
Hmg20a-206ENSMUST00000217518 Phldb1Q6PDH0 1371 aaKnown RBP18.44■□□□□ 0.54
Hmg20a-206ENSMUST00000217518 Baz1bQ9Z277 1479 aa18.39■□□□□ 0.53
Hmg20a-206ENSMUST00000217518 Ubl4bQ9CQ84 188 aa18.3■□□□□ 0.52
Hmg20a-206ENSMUST00000217518 Dnajc5P60904 198 aa18.24■□□□□ 0.51
Hmg20a-206ENSMUST00000217518 Mrc2Q64449 1479 aa18.21■□□□□ 0.51
Hmg20a-206ENSMUST00000217518 Unc13aQ4KUS2 1712 aa18.16■□□□□ 0.5
Hmg20a-206ENSMUST00000217518 Trim41Q5NCC3 630 aa18.15■□□□□ 0.5
Hmg20a-206ENSMUST00000217518 CftrP26361 1476 aa17.98■□□□□ 0.47
Hmg20a-206ENSMUST00000217518 Cttnbp2B9EJA2 1648 aa17.91■□□□□ 0.46
Hmg20a-206ENSMUST00000217518 HrcG5E8J6 738 aa17.91■□□□□ 0.46
Hmg20a-206ENSMUST00000217518 Synj1Q8CHC4 1574 aa17.89■□□□□ 0.45
Hmg20a-206ENSMUST00000217518 Cngb1E1AZ71 1325 aa17.88■□□□□ 0.45
Hmg20a-206ENSMUST00000217518 Brd4Q9ESU6 1400 aaKnown RBP17.84■□□□□ 0.45
Hmg20a-206ENSMUST00000217518 Lrriq1Q0P5X1 1673 aa17.84■□□□□ 0.45
Hmg20a-206ENSMUST00000217518 Esf1Q3V1V3 845 aaKnown RBP17.81■□□□□ 0.44
Hmg20a-206ENSMUST00000217518 Rsf1E9PWW9 1441 aaKnown RBP17.77■□□□□ 0.44
Hmg20a-206ENSMUST00000217518 Cux2P70298 1426 aa17.75■□□□□ 0.43
Hmg20a-206ENSMUST00000217518 Kif21aQ9QXL2 1672 aa17.68■□□□□ 0.42
Hmg20a-206ENSMUST00000217518 Kif15Q6P9L6 1387 aa17.66■□□□□ 0.42
Hmg20a-206ENSMUST00000217518 Chic1Q8CBW7 227 aa17.63■□□□□ 0.41
Hmg20a-206ENSMUST00000217518 Shroom2A2ALU4 1481 aa17.6■□□□□ 0.41
Hmg20a-206ENSMUST00000217518 Eif4g3Q80XI3 1579 aaKnown RBP17.57■□□□□ 0.4
Hmg20a-206ENSMUST00000217518 Golga3P55937 1487 aa17.54■□□□□ 0.4
Hmg20a-206ENSMUST00000217518 Gab3Q8BSM5 595 aa17.53■□□□□ 0.4
Hmg20a-206ENSMUST00000217518 Lamc3Q9R0B6 1581 aa17.52■□□□□ 0.4
Hmg20a-206ENSMUST00000217518 Ehmt2Q9Z148 1263 aaKnown RBP17.52■□□□□ 0.39
Hmg20a-206ENSMUST00000217518 Npm1Q61937 292 aaKnown RBP17.5■□□□□ 0.39
Hmg20a-206ENSMUST00000217518 Col17a1Q07563 1470 aa17.46■□□□□ 0.39
Hmg20a-206ENSMUST00000217518 Ccdc88bQ4QRL3 1481 aa17.46■□□□□ 0.38
Hmg20a-206ENSMUST00000217518 Cep164Q5DU05 1446 aa17.45■□□□□ 0.38
Hmg20a-206ENSMUST00000217518 Urb2E9Q7L1 1524 aaKnown RBP17.42■□□□□ 0.38
Hmg20a-206ENSMUST00000217518 Plb1Q3TTY0 1478 aa17.38■□□□□ 0.37
Hmg20a-206ENSMUST00000217518 Pabpn1Q8CCS6 302 aaKnown RBP17.35■□□□□ 0.37
Hmg20a-206ENSMUST00000217518 Dhx29Q6PGC1 1365 aaKnown RBP17.35■□□□□ 0.37
Hmg20a-206ENSMUST00000217518 Top2bQ64511 1612 aa17.3■□□□□ 0.36
Hmg20a-206ENSMUST00000217518 LrpprcQ6PB66 1392 aaKnown RBP17.25■□□□□ 0.35
Hmg20a-206ENSMUST00000217518 Il27Q8K3I6 234 aa17.25■□□□□ 0.35
Hmg20a-206ENSMUST00000217518 Ccdc18Q640L5 1455 aa17.23■□□□□ 0.35
Hmg20a-206ENSMUST00000217518 Crocc2F6XLV1 1638 aa17.23■□□□□ 0.35
Hmg20a-206ENSMUST00000217518 TnnQ80Z71 1560 aa17.21■□□□□ 0.35
Hmg20a-206ENSMUST00000217518 Rusc2Q80U22 1514 aa17.19■□□□□ 0.34
Hmg20a-206ENSMUST00000217518 Pelp1Q9DBD5 1123 aaKnown RBP17.18■□□□□ 0.34
Hmg20a-206ENSMUST00000217518 Ift140E9PY46 1464 aa17.17■□□□□ 0.34
Hmg20a-206ENSMUST00000217518 Camsap1A2AHC3 1581 aa17.16■□□□□ 0.34
Hmg20a-206ENSMUST00000217518 Zcchc11B2RX14 1644 aaKnown RBP17.13■□□□□ 0.33
Hmg20a-206ENSMUST00000217518 PogzQ8BZH4 1409 aaKnown RBP17.12■□□□□ 0.33
Hmg20a-206ENSMUST00000217518 Fmn1Q05860 1466 aa17.11■□□□□ 0.33
Hmg20a-206ENSMUST00000217518 Disp1Q3TDN0 1521 aa17.03■□□□□ 0.32
Hmg20a-206ENSMUST00000217518 Duox2A2AQ99 1517 aa17.03■□□□□ 0.32
Hmg20a-206ENSMUST00000217518 Npm2Q80W85 207 aa17■□□□□ 0.31
Hmg20a-206ENSMUST00000217518 Pcdh10E9PXQ7 1057 aa16.99■□□□□ 0.31
Hmg20a-206ENSMUST00000217518 Myt1lP97500 1187 aa16.99■□□□□ 0.31
Hmg20a-206ENSMUST00000217518 Nup160Q9Z0W3 1402 aaKnown RBP16.95■□□□□ 0.3
Hmg20a-206ENSMUST00000217518 Top2aQ01320 1528 aaKnown RBP16.94■□□□□ 0.3
Hmg20a-206ENSMUST00000217518 Cc2d2bA0A286YDU8 1405 aa16.93■□□□□ 0.3
Hmg20a-206ENSMUST00000217518 Adgrl3Q80TS3 1537 aa16.92■□□□□ 0.3
Hmg20a-206ENSMUST00000217518 Grin2bQ01097 1482 aa16.9■□□□□ 0.3
Hmg20a-206ENSMUST00000217518 Acin1Q9JIX8 1338 aaKnown RBP16.89■□□□□ 0.29
Hmg20a-206ENSMUST00000217518 Arhgef5E9Q7D5 1581 aa16.89■□□□□ 0.29
Hmg20a-206ENSMUST00000217518 Setd1bQ8CFT2 1985 aa16.88■□□□□ 0.29
Hmg20a-206ENSMUST00000217518 Samd9lQ69Z37 1561 aa16.88■□□□□ 0.29
Hmg20a-206ENSMUST00000217518 Pbrm1Q8BSQ9 1634 aaKnown RBP16.87■□□□□ 0.29
Hmg20a-206ENSMUST00000217518 PtprkP35822 1457 aa16.86■□□□□ 0.29
Hmg20a-206ENSMUST00000217518 Rapgef2Q8CHG7 1496 aa16.85■□□□□ 0.29
Hmg20a-206ENSMUST00000217518 Gm156Q58A37 223 aa16.84■□□□□ 0.29
Hmg20a-206ENSMUST00000217518 Cep170Q6A065 1588 aa16.83■□□□□ 0.28
Hmg20a-206ENSMUST00000217518 Fgd6Q69ZL1 1399 aa16.81■□□□□ 0.28
Hmg20a-206ENSMUST00000217518 Gapvd1Q6PAR5 1458 aa16.81■□□□□ 0.28
Hmg20a-206ENSMUST00000217518 Efcab5A0JP43 1406 aa16.81■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 21.8 ms