RNA–Protein interactions for RNA: ENSMUST00000215269.1

Hmg20a-205, Transcript of High mobility group protein 20A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmg20a, Length 1,700 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20a-205ENSMUST00000215269 Gm35339A0A140LHH9 1649 aa22.18■■□□□ 1.14
Hmg20a-205ENSMUST00000215269 NischQ80TM9 1593 aa22.03■■□□□ 1.12
Hmg20a-205ENSMUST00000215269 Abcc9P70170 1546 aa21.34■■□□□ 1.01
Hmg20a-205ENSMUST00000215269 Abcc8B2RUS7 1588 aa21.22■□□□□ 0.99
Hmg20a-205ENSMUST00000215269 ScribQ80U72 1612 aa20.37■□□□□ 0.85
Hmg20a-205ENSMUST00000215269 NacadQ5SWP3 1504 aa19.73■□□□□ 0.75
Hmg20a-205ENSMUST00000215269 Kdm5dQ62240 1548 aa19.73■□□□□ 0.75
Hmg20a-205ENSMUST00000215269 Rtl1Q7M732 1744 aa19.5■□□□□ 0.71
Hmg20a-205ENSMUST00000215269 Dcaf1Q80TR8 1506 aa19.49■□□□□ 0.71
Hmg20a-205ENSMUST00000215269 Rhox8Q6VSS7 320 aa19.34■□□□□ 0.69
Hmg20a-205ENSMUST00000215269 Sycp2Q9CUU3 1500 aa19.31■□□□□ 0.68
Hmg20a-205ENSMUST00000215269 Rb1cc1Q9ESK9 1588 aa19.24■□□□□ 0.67
Hmg20a-205ENSMUST00000215269 BicraF8VPZ9 1578 aa19.04■□□□□ 0.64
Hmg20a-205ENSMUST00000215269 Ccdc180J3QNE4 1664 aa18.99■□□□□ 0.63
Hmg20a-205ENSMUST00000215269 Baz1aO88379 1555 aa18.95■□□□□ 0.62
Hmg20a-205ENSMUST00000215269 Crybg2B7ZCC2 1516 aa18.77■□□□□ 0.59
Hmg20a-205ENSMUST00000215269 Zcchc6Q5BLK4 1491 aaKnown RBP18.68■□□□□ 0.58
Hmg20a-205ENSMUST00000215269 Pds5bQ4VA53 1446 aaKnown RBP18.56■□□□□ 0.56
Hmg20a-205ENSMUST00000215269 Smarca2Q6DIC0 1577 aa18.44■□□□□ 0.54
Hmg20a-205ENSMUST00000215269 Dnajc5bQ9CQ94 199 aa18.37■□□□□ 0.53
Hmg20a-205ENSMUST00000215269 Atad2bE9Q166 1460 aaKnown RBP18.36■□□□□ 0.53
Hmg20a-205ENSMUST00000215269 Cecr2E9Q2Z1 1453 aa18.34■□□□□ 0.53
Hmg20a-205ENSMUST00000215269 Thoc2B1AZI6 1594 aaKnown RBP18.29■□□□□ 0.52
Hmg20a-205ENSMUST00000215269 Smarca4Q3TKT4 1613 aaKnown RBP18.23■□□□□ 0.51
Hmg20a-205ENSMUST00000215269 Ercc6F8VPZ5 1481 aa18.17■□□□□ 0.5
Hmg20a-205ENSMUST00000215269 Iqgap2Q3UQ44 1575 aa18.11■□□□□ 0.49
Hmg20a-205ENSMUST00000215269 Ccdc136Q3TVA9 1136 aa18.09■□□□□ 0.49
Hmg20a-205ENSMUST00000215269 Cc2d2aQ8CFW7 1633 aa18.04■□□□□ 0.48
Hmg20a-205ENSMUST00000215269 Synj1Q8CHC4 1574 aa17.96■□□□□ 0.47
Hmg20a-205ENSMUST00000215269 Wdr62Q3U3T8 1523 aa17.93■□□□□ 0.46
Hmg20a-205ENSMUST00000215269 Frmpd1A2AKB4 1549 aa17.91■□□□□ 0.46
Hmg20a-205ENSMUST00000215269 Fam135aQ6NS59 1506 aa17.91■□□□□ 0.46
Hmg20a-205ENSMUST00000215269 CftrP26361 1476 aa17.9■□□□□ 0.46
Hmg20a-205ENSMUST00000215269 HrcG5E8J6 738 aa17.89■□□□□ 0.46
Hmg20a-205ENSMUST00000215269 Brd4Q9ESU6 1400 aaKnown RBP17.87■□□□□ 0.45
Hmg20a-205ENSMUST00000215269 Cttnbp2B9EJA2 1648 aa17.87■□□□□ 0.45
Hmg20a-205ENSMUST00000215269 Phldb1Q6PDH0 1371 aaKnown RBP17.86■□□□□ 0.45
Hmg20a-205ENSMUST00000215269 Rpgrip1Q9EPQ2 1331 aa17.86■□□□□ 0.45
Hmg20a-205ENSMUST00000215269 Baz1bQ9Z277 1479 aa17.8■□□□□ 0.44
Hmg20a-205ENSMUST00000215269 Unc13aQ4KUS2 1712 aa17.74■□□□□ 0.43
Hmg20a-205ENSMUST00000215269 Ubl4bQ9CQ84 188 aa17.72■□□□□ 0.43
Hmg20a-205ENSMUST00000215269 Trim41Q5NCC3 630 aa17.67■□□□□ 0.42
Hmg20a-205ENSMUST00000215269 Esf1Q3V1V3 845 aaKnown RBP17.6■□□□□ 0.41
Hmg20a-205ENSMUST00000215269 Mrc2Q64449 1479 aa17.53■□□□□ 0.4
Hmg20a-205ENSMUST00000215269 Acin1Q9JIX8 1338 aaKnown RBP17.44■□□□□ 0.38
Hmg20a-205ENSMUST00000215269 Rsf1E9PWW9 1441 aaKnown RBP17.4■□□□□ 0.38
Hmg20a-205ENSMUST00000215269 Cep164Q5DU05 1446 aa17.4■□□□□ 0.38
Hmg20a-205ENSMUST00000215269 Golga3P55937 1487 aa17.39■□□□□ 0.37
Hmg20a-205ENSMUST00000215269 Cngb1E1AZ71 1325 aa17.39■□□□□ 0.37
Hmg20a-205ENSMUST00000215269 Top2bQ64511 1612 aa17.37■□□□□ 0.37
Hmg20a-205ENSMUST00000215269 Kif15Q6P9L6 1387 aa17.34■□□□□ 0.37
Hmg20a-205ENSMUST00000215269 Lamc3Q9R0B6 1581 aa17.31■□□□□ 0.36
Hmg20a-205ENSMUST00000215269 Cux2P70298 1426 aa17.3■□□□□ 0.36
Hmg20a-205ENSMUST00000215269 TnnQ80Z71 1560 aa17.21■□□□□ 0.35
Hmg20a-205ENSMUST00000215269 Npm1Q61937 292 aaKnown RBP17.21■□□□□ 0.35
Hmg20a-205ENSMUST00000215269 Kif21aQ9QXL2 1672 aa17.13■□□□□ 0.33
Hmg20a-205ENSMUST00000215269 Fmn1Q05860 1466 aa17.11■□□□□ 0.33
Hmg20a-205ENSMUST00000215269 Lrriq1Q0P5X1 1673 aa17.11■□□□□ 0.33
Hmg20a-205ENSMUST00000215269 Il27Q8K3I6 234 aa17.08■□□□□ 0.32
Hmg20a-205ENSMUST00000215269 Ccdc88bQ4QRL3 1481 aa17.08■□□□□ 0.32
Hmg20a-205ENSMUST00000215269 Ccdc18Q640L5 1455 aa17.08■□□□□ 0.32
Hmg20a-205ENSMUST00000215269 Camsap1A2AHC3 1581 aa17.06■□□□□ 0.32
Hmg20a-205ENSMUST00000215269 Chic1Q8CBW7 227 aa17■□□□□ 0.31
Hmg20a-205ENSMUST00000215269 Dhx29Q6PGC1 1365 aaKnown RBP16.94■□□□□ 0.3
Hmg20a-205ENSMUST00000215269 LrpprcQ6PB66 1392 aaKnown RBP16.94■□□□□ 0.3
Hmg20a-205ENSMUST00000215269 Ehmt2Q9Z148 1263 aaKnown RBP16.93■□□□□ 0.3
Hmg20a-205ENSMUST00000215269 Eif4g3Q80XI3 1579 aaKnown RBP16.89■□□□□ 0.29
Hmg20a-205ENSMUST00000215269 Top2aQ01320 1528 aaKnown RBP16.88■□□□□ 0.29
Hmg20a-205ENSMUST00000215269 Crocc2F6XLV1 1638 aa16.86■□□□□ 0.29
Hmg20a-205ENSMUST00000215269 Urb2E9Q7L1 1524 aaKnown RBP16.86■□□□□ 0.29
Hmg20a-205ENSMUST00000215269 Plb1Q3TTY0 1478 aa16.85■□□□□ 0.29
Hmg20a-205ENSMUST00000215269 PogzQ8BZH4 1409 aaKnown RBP16.83■□□□□ 0.28
Hmg20a-205ENSMUST00000215269 Grin2bQ01097 1482 aa16.83■□□□□ 0.28
Hmg20a-205ENSMUST00000215269 Duox2A2AQ99 1517 aa16.78■□□□□ 0.28
Hmg20a-205ENSMUST00000215269 Ift140E9PY46 1464 aa16.75■□□□□ 0.27
Hmg20a-205ENSMUST00000215269 PtprkP35822 1457 aa16.72■□□□□ 0.27
Hmg20a-205ENSMUST00000215269 Samd9lQ69Z37 1561 aa16.71■□□□□ 0.27
Hmg20a-205ENSMUST00000215269 NrkQ9R0G8 1455 aa16.66■□□□□ 0.26
Hmg20a-205ENSMUST00000215269 Efcab5A0JP43 1406 aa16.66■□□□□ 0.26
Hmg20a-205ENSMUST00000215269 Shroom2A2ALU4 1481 aa16.66■□□□□ 0.26
Hmg20a-205ENSMUST00000215269 Dnajc5P60904 198 aa16.65■□□□□ 0.26
Hmg20a-205ENSMUST00000215269 Gab3Q8BSM5 595 aa16.65■□□□□ 0.26
Hmg20a-205ENSMUST00000215269 Shroom4Q1W617 1475 aa16.65■□□□□ 0.26
Hmg20a-205ENSMUST00000215269 Rusc2Q80U22 1514 aa16.64■□□□□ 0.25
Hmg20a-205ENSMUST00000215269 Rapgef2Q8CHG7 1496 aa16.61■□□□□ 0.25
Hmg20a-205ENSMUST00000215269 Disp1Q3TDN0 1521 aa16.61■□□□□ 0.25
Hmg20a-205ENSMUST00000215269 Rad54l2Q99NG0 1466 aa16.61■□□□□ 0.25
Hmg20a-205ENSMUST00000215269 Pcgf6Q99NA9 353 aa16.58■□□□□ 0.24
Hmg20a-205ENSMUST00000215269 Setd1bQ8CFT2 1985 aa16.57■□□□□ 0.24
Hmg20a-205ENSMUST00000215269 Pbrm1Q8BSQ9 1634 aaKnown RBP16.57■□□□□ 0.24
Hmg20a-205ENSMUST00000215269 Pabpn1Q8CCS6 302 aaKnown RBP16.56■□□□□ 0.24
Hmg20a-205ENSMUST00000215269 Cc2d2bA0A286YDU8 1405 aa16.54■□□□□ 0.24
Hmg20a-205ENSMUST00000215269 Nup160Q9Z0W3 1402 aaKnown RBP16.52■□□□□ 0.24
Hmg20a-205ENSMUST00000215269 Magi3Q9EQJ9 1476 aa16.52■□□□□ 0.23
Hmg20a-205ENSMUST00000215269 Npm2Q80W85 207 aa16.51■□□□□ 0.23
Hmg20a-205ENSMUST00000215269 SynmQ70IV5 1561 aa16.48■□□□□ 0.23
Hmg20a-205ENSMUST00000215269 NefmP08553 848 aa16.48■□□□□ 0.23
Hmg20a-205ENSMUST00000215269 Grin2aP35436 1464 aa16.48■□□□□ 0.23
Hmg20a-205ENSMUST00000215269 Pelp1Q9DBD5 1123 aaKnown RBP16.48■□□□□ 0.23
Hmg20a-205ENSMUST00000215269 Zeb1Q64318 1117 aa16.47■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 47.5 ms