RNA–Protein interactions for RNA: ENSMUST00000208478.1

Rab38-202, Transcript of Ras-related protein Rab-38, mousemouse

TSL 3 BASIC

Gene Rab38, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rab38-202ENSMUST00000208478 Gm35339A0A140LHH9 1649 aa22.46■■□□□ 1.19
Rab38-202ENSMUST00000208478 NischQ80TM9 1593 aa22.06■■□□□ 1.12
Rab38-202ENSMUST00000208478 Abcc9P70170 1546 aa21.45■■□□□ 1.02
Rab38-202ENSMUST00000208478 Abcc8B2RUS7 1588 aa21.26■□□□□ 0.99
Rab38-202ENSMUST00000208478 ScribQ80U72 1612 aa20.38■□□□□ 0.85
Rab38-202ENSMUST00000208478 Dcaf1Q80TR8 1506 aa19.76■□□□□ 0.75
Rab38-202ENSMUST00000208478 NacadQ5SWP3 1504 aa19.73■□□□□ 0.75
Rab38-202ENSMUST00000208478 Kdm5dQ62240 1548 aa19.72■□□□□ 0.75
Rab38-202ENSMUST00000208478 Ccdc180J3QNE4 1664 aa19.33■□□□□ 0.69
Rab38-202ENSMUST00000208478 Sycp2Q9CUU3 1500 aa19.33■□□□□ 0.68
Rab38-202ENSMUST00000208478 Rb1cc1Q9ESK9 1588 aa19.28■□□□□ 0.68
Rab38-202ENSMUST00000208478 Baz1aO88379 1555 aa19.05■□□□□ 0.64
Rab38-202ENSMUST00000208478 BicraF8VPZ9 1578 aa19.04■□□□□ 0.64
Rab38-202ENSMUST00000208478 Rhox8Q6VSS7 320 aa19.03■□□□□ 0.64
Rab38-202ENSMUST00000208478 Crybg2B7ZCC2 1516 aa18.99■□□□□ 0.63
Rab38-202ENSMUST00000208478 Rtl1Q7M732 1744 aa18.69■□□□□ 0.58
Rab38-202ENSMUST00000208478 Smarca2Q6DIC0 1577 aa18.55■□□□□ 0.56
Rab38-202ENSMUST00000208478 Zcchc6Q5BLK4 1491 aaKnown RBP18.54■□□□□ 0.56
Rab38-202ENSMUST00000208478 Pds5bQ4VA53 1446 aaKnown RBP18.38■□□□□ 0.53
Rab38-202ENSMUST00000208478 Smarca4Q3TKT4 1613 aaKnown RBP18.3■□□□□ 0.52
Rab38-202ENSMUST00000208478 Atad2bE9Q166 1460 aaKnown RBP18.28■□□□□ 0.52
Rab38-202ENSMUST00000208478 Thoc2B1AZI6 1594 aaKnown RBP18.22■□□□□ 0.51
Rab38-202ENSMUST00000208478 Cecr2E9Q2Z1 1453 aa18.2■□□□□ 0.5
Rab38-202ENSMUST00000208478 Iqgap2Q3UQ44 1575 aa18.14■□□□□ 0.49
Rab38-202ENSMUST00000208478 Cttnbp2B9EJA2 1648 aa18■□□□□ 0.47
Rab38-202ENSMUST00000208478 Ercc6F8VPZ5 1481 aa17.99■□□□□ 0.47
Rab38-202ENSMUST00000208478 Wdr62Q3U3T8 1523 aa17.95■□□□□ 0.46
Rab38-202ENSMUST00000208478 Brd4Q9ESU6 1400 aaKnown RBP17.93■□□□□ 0.46
Rab38-202ENSMUST00000208478 Synj1Q8CHC4 1574 aa17.92■□□□□ 0.46
Rab38-202ENSMUST00000208478 CftrP26361 1476 aa17.91■□□□□ 0.46
Rab38-202ENSMUST00000208478 Frmpd1A2AKB4 1549 aa17.87■□□□□ 0.45
Rab38-202ENSMUST00000208478 Cc2d2aQ8CFW7 1633 aa17.87■□□□□ 0.45
Rab38-202ENSMUST00000208478 Fam135aQ6NS59 1506 aa17.86■□□□□ 0.45
Rab38-202ENSMUST00000208478 Unc13aQ4KUS2 1712 aa17.84■□□□□ 0.45
Rab38-202ENSMUST00000208478 Dnajc5bQ9CQ94 199 aa17.8■□□□□ 0.44
Rab38-202ENSMUST00000208478 Ccdc136Q3TVA9 1136 aa17.76■□□□□ 0.43
Rab38-202ENSMUST00000208478 Baz1bQ9Z277 1479 aa17.75■□□□□ 0.43
Rab38-202ENSMUST00000208478 Phldb1Q6PDH0 1371 aaKnown RBP17.66■□□□□ 0.42
Rab38-202ENSMUST00000208478 Trim41Q5NCC3 630 aa17.64■□□□□ 0.41
Rab38-202ENSMUST00000208478 Top2bQ64511 1612 aa17.5■□□□□ 0.39
Rab38-202ENSMUST00000208478 Golga3P55937 1487 aa17.4■□□□□ 0.38
Rab38-202ENSMUST00000208478 Lamc3Q9R0B6 1581 aa17.4■□□□□ 0.38
Rab38-202ENSMUST00000208478 Esf1Q3V1V3 845 aaKnown RBP17.38■□□□□ 0.37
Rab38-202ENSMUST00000208478 Mrc2Q64449 1479 aa17.35■□□□□ 0.37
Rab38-202ENSMUST00000208478 Rsf1E9PWW9 1441 aaKnown RBP17.34■□□□□ 0.37
Rab38-202ENSMUST00000208478 TnnQ80Z71 1560 aa17.34■□□□□ 0.37
Rab38-202ENSMUST00000208478 Ubl4bQ9CQ84 188 aa17.34■□□□□ 0.37
Rab38-202ENSMUST00000208478 Kif15Q6P9L6 1387 aa17.22■□□□□ 0.35
Rab38-202ENSMUST00000208478 Fmn1Q05860 1466 aa17.18■□□□□ 0.34
Rab38-202ENSMUST00000208478 Cux2P70298 1426 aa17.17■□□□□ 0.34
Rab38-202ENSMUST00000208478 Kif21aQ9QXL2 1672 aa17.12■□□□□ 0.33
Rab38-202ENSMUST00000208478 Cngb1E1AZ71 1325 aa17.1■□□□□ 0.33
Rab38-202ENSMUST00000208478 Camsap1A2AHC3 1581 aa17.09■□□□□ 0.33
Rab38-202ENSMUST00000208478 Ccdc18Q640L5 1455 aa17.05■□□□□ 0.32
Rab38-202ENSMUST00000208478 Lrriq1Q0P5X1 1673 aa17.04■□□□□ 0.32
Rab38-202ENSMUST00000208478 Cep164Q5DU05 1446 aa17.01■□□□□ 0.31
Rab38-202ENSMUST00000208478 Top2aQ01320 1528 aaKnown RBP16.95■□□□□ 0.3
Rab38-202ENSMUST00000208478 Ccdc88bQ4QRL3 1481 aa16.94■□□□□ 0.3
Rab38-202ENSMUST00000208478 Npm1Q61937 292 aaKnown RBP16.93■□□□□ 0.3
Rab38-202ENSMUST00000208478 Crocc2F6XLV1 1638 aa16.88■□□□□ 0.29
Rab38-202ENSMUST00000208478 LrpprcQ6PB66 1392 aaKnown RBP16.87■□□□□ 0.29
Rab38-202ENSMUST00000208478 Grin2bQ01097 1482 aa16.84■□□□□ 0.29
Rab38-202ENSMUST00000208478 HrcG5E8J6 738 aa16.83■□□□□ 0.28
Rab38-202ENSMUST00000208478 Dhx29Q6PGC1 1365 aaKnown RBP16.83■□□□□ 0.28
Rab38-202ENSMUST00000208478 PogzQ8BZH4 1409 aaKnown RBP16.83■□□□□ 0.28
Rab38-202ENSMUST00000208478 Eif4g3Q80XI3 1579 aaKnown RBP16.81■□□□□ 0.28
Rab38-202ENSMUST00000208478 Urb2E9Q7L1 1524 aaKnown RBP16.78■□□□□ 0.28
Rab38-202ENSMUST00000208478 NrkQ9R0G8 1455 aa16.76■□□□□ 0.27
Rab38-202ENSMUST00000208478 Duox2A2AQ99 1517 aa16.75■□□□□ 0.27
Rab38-202ENSMUST00000208478 Chic1Q8CBW7 227 aa16.75■□□□□ 0.27
Rab38-202ENSMUST00000208478 Il27Q8K3I6 234 aa16.74■□□□□ 0.27
Rab38-202ENSMUST00000208478 Setd1bQ8CFT2 1985 aa16.73■□□□□ 0.27
Rab38-202ENSMUST00000208478 Plb1Q3TTY0 1478 aa16.73■□□□□ 0.27
Rab38-202ENSMUST00000208478 Pbrm1Q8BSQ9 1634 aaKnown RBP16.72■□□□□ 0.27
Rab38-202ENSMUST00000208478 Efcab5A0JP43 1406 aa16.7■□□□□ 0.26
Rab38-202ENSMUST00000208478 Samd9lQ69Z37 1561 aa16.68■□□□□ 0.26
Rab38-202ENSMUST00000208478 Ift140E9PY46 1464 aa16.67■□□□□ 0.26
Rab38-202ENSMUST00000208478 Shroom4Q1W617 1475 aa16.67■□□□□ 0.26
Rab38-202ENSMUST00000208478 Gpatch8A2A6A1 1505 aa16.64■□□□□ 0.25
Rab38-202ENSMUST00000208478 Rusc2Q80U22 1514 aa16.6■□□□□ 0.25
Rab38-202ENSMUST00000208478 PtprkP35822 1457 aa16.58■□□□□ 0.24
Rab38-202ENSMUST00000208478 Disp1Q3TDN0 1521 aa16.57■□□□□ 0.24
Rab38-202ENSMUST00000208478 SynmQ70IV5 1561 aa16.54■□□□□ 0.24
Rab38-202ENSMUST00000208478 Nup160Q9Z0W3 1402 aaKnown RBP16.53■□□□□ 0.24
Rab38-202ENSMUST00000208478 Eif4g1Q6NZJ6 1600 aaKnown RBP16.52■□□□□ 0.23
Rab38-202ENSMUST00000208478 Rapgef2Q8CHG7 1496 aa16.5■□□□□ 0.23
Rab38-202ENSMUST00000208478 Magi3Q9EQJ9 1476 aa16.5■□□□□ 0.23
Rab38-202ENSMUST00000208478 Grin2aP35436 1464 aa16.47■□□□□ 0.23
Rab38-202ENSMUST00000208478 Mroh2bQ7M6Y6 1581 aa16.47■□□□□ 0.23
Rab38-202ENSMUST00000208478 Cc2d2bA0A286YDU8 1405 aa16.46■□□□□ 0.23
Rab38-202ENSMUST00000208478 Map3k1P53349 1493 aa16.44■□□□□ 0.22
Rab38-202ENSMUST00000208478 Rad54l2Q99NG0 1466 aa16.44■□□□□ 0.22
Rab38-202ENSMUST00000208478 Pla2r1Q62028 1487 aa16.42■□□□□ 0.22
Rab38-202ENSMUST00000208478 AqrQ8CFQ3 1481 aaKnown RBP16.39■□□□□ 0.21
Rab38-202ENSMUST00000208478 Shroom2A2ALU4 1481 aa16.38■□□□□ 0.21
Rab38-202ENSMUST00000208478 Arhgap35Q91YM2 1499 aa16.37■□□□□ 0.21
Rab38-202ENSMUST00000208478 Adamts12Q811B3 1600 aa16.34■□□□□ 0.21
Rab38-202ENSMUST00000208478 Cep162Q6ZQ06 1403 aa16.34■□□□□ 0.21
Rab38-202ENSMUST00000208478 Abca16E9PWJ7 1678 aa16.33■□□□□ 0.2
Rab38-202ENSMUST00000208478 Polr1aO35134 1717 aaKnown RBP16.32■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 23.6 ms