RNA–Protein interactions for RNA: ENSMUST00000207472.1

Gm42397-201, mousemouse

TSL 1 (best) BASIC

Gene Gm42397, Length 2,002 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm42397-201ENSMUST00000207472 Gm35339A0A140LHH9 1649 aa14.74□□□□□ -0.05
Gm42397-201ENSMUST00000207472 NischQ80TM9 1593 aa14.48□□□□□ -0.09
Gm42397-201ENSMUST00000207472 Abcc9P70170 1546 aa14.02□□□□□ -0.17
Gm42397-201ENSMUST00000207472 Abcc8B2RUS7 1588 aa13.99□□□□□ -0.17
Gm42397-201ENSMUST00000207472 ScribQ80U72 1612 aa13.46□□□□□ -0.25
Gm42397-201ENSMUST00000207472 NacadQ5SWP3 1504 aa13.08□□□□□ -0.32
Gm42397-201ENSMUST00000207472 Kdm5dQ62240 1548 aa13.01□□□□□ -0.33
Gm42397-201ENSMUST00000207472 Dcaf1Q80TR8 1506 aa12.96□□□□□ -0.34
Gm42397-201ENSMUST00000207472 Sycp2Q9CUU3 1500 aa12.81□□□□□ -0.36
Gm42397-201ENSMUST00000207472 Rb1cc1Q9ESK9 1588 aa12.62□□□□□ -0.39
Gm42397-201ENSMUST00000207472 BicraF8VPZ9 1578 aa12.6□□□□□ -0.39
Gm42397-201ENSMUST00000207472 Ccdc180J3QNE4 1664 aa12.6□□□□□ -0.39
Gm42397-201ENSMUST00000207472 Crybg2B7ZCC2 1516 aa12.49□□□□□ -0.41
Gm42397-201ENSMUST00000207472 Baz1aO88379 1555 aa12.46□□□□□ -0.41
Gm42397-201ENSMUST00000207472 Rhox8Q6VSS7 320 aa12.43□□□□□ -0.42
Gm42397-201ENSMUST00000207472 Pds5bQ4VA53 1446 aaKnown RBP12.29□□□□□ -0.44
Gm42397-201ENSMUST00000207472 Zcchc6Q5BLK4 1491 aaKnown RBP12.2□□□□□ -0.46
Gm42397-201ENSMUST00000207472 Thoc2B1AZI6 1594 aaKnown RBP12.17□□□□□ -0.46
Gm42397-201ENSMUST00000207472 Atad2bE9Q166 1460 aaKnown RBP12.16□□□□□ -0.46
Gm42397-201ENSMUST00000207472 Dnajc5bQ9CQ94 199 aa12.11□□□□□ -0.47
Gm42397-201ENSMUST00000207472 Smarca2Q6DIC0 1577 aa12.09□□□□□ -0.47
Gm42397-201ENSMUST00000207472 Smarca4Q3TKT4 1613 aaKnown RBP12.08□□□□□ -0.48
Gm42397-201ENSMUST00000207472 Rtl1Q7M732 1744 aa12.03□□□□□ -0.48
Gm42397-201ENSMUST00000207472 Ercc6F8VPZ5 1481 aa12.02□□□□□ -0.49
Gm42397-201ENSMUST00000207472 Iqgap2Q3UQ44 1575 aa11.99□□□□□ -0.49
Gm42397-201ENSMUST00000207472 Cecr2E9Q2Z1 1453 aa11.97□□□□□ -0.49
Gm42397-201ENSMUST00000207472 Cc2d2aQ8CFW7 1633 aa11.96□□□□□ -0.49
Gm42397-201ENSMUST00000207472 Fam135aQ6NS59 1506 aa11.9□□□□□ -0.5
Gm42397-201ENSMUST00000207472 Wdr62Q3U3T8 1523 aa11.9□□□□□ -0.5
Gm42397-201ENSMUST00000207472 Baz1bQ9Z277 1479 aa11.89□□□□□ -0.51
Gm42397-201ENSMUST00000207472 Frmpd1A2AKB4 1549 aa11.85□□□□□ -0.51
Gm42397-201ENSMUST00000207472 Mapk8ip2Q9ERE9 830 aa11.84□□□□□ -0.51
Gm42397-201ENSMUST00000207472 Phldb1Q6PDH0 1371 aaKnown RBP11.81□□□□□ -0.52
Gm42397-201ENSMUST00000207472 Cttnbp2B9EJA2 1648 aa11.79□□□□□ -0.52
Gm42397-201ENSMUST00000207472 Unc13aQ4KUS2 1712 aa11.76□□□□□ -0.53
Gm42397-201ENSMUST00000207472 Brd4Q9ESU6 1400 aaKnown RBP11.76□□□□□ -0.53
Gm42397-201ENSMUST00000207472 CftrP26361 1476 aa11.75□□□□□ -0.53
Gm42397-201ENSMUST00000207472 Synj1Q8CHC4 1574 aa11.71□□□□□ -0.53
Gm42397-201ENSMUST00000207472 Chic1Q8CBW7 227 aa11.71□□□□□ -0.53
Gm42397-201ENSMUST00000207472 Ubl4bQ9CQ84 188 aa11.66□□□□□ -0.54
Gm42397-201ENSMUST00000207472 Ccdc136Q3TVA9 1136 aa11.61□□□□□ -0.55
Gm42397-201ENSMUST00000207472 Mrc2Q64449 1479 aa11.61□□□□□ -0.55
Gm42397-201ENSMUST00000207472 Trim41Q5NCC3 630 aa11.55□□□□□ -0.56
Gm42397-201ENSMUST00000207472 Esf1Q3V1V3 845 aaKnown RBP11.51□□□□□ -0.57
Gm42397-201ENSMUST00000207472 Rsf1E9PWW9 1441 aaKnown RBP11.48□□□□□ -0.57
Gm42397-201ENSMUST00000207472 Lamc3Q9R0B6 1581 aa11.44□□□□□ -0.58
Gm42397-201ENSMUST00000207472 Kif15Q6P9L6 1387 aa11.41□□□□□ -0.58
Gm42397-201ENSMUST00000207472 Cux2P70298 1426 aa11.41□□□□□ -0.58
Gm42397-201ENSMUST00000207472 Lrriq1Q0P5X1 1673 aa11.36□□□□□ -0.59
Gm42397-201ENSMUST00000207472 Kif21aQ9QXL2 1672 aa11.35□□□□□ -0.59
Gm42397-201ENSMUST00000207472 Top2bQ64511 1612 aa11.35□□□□□ -0.59
Gm42397-201ENSMUST00000207472 Golga3P55937 1487 aa11.33□□□□□ -0.6
Gm42397-201ENSMUST00000207472 TnnQ80Z71 1560 aa11.32□□□□□ -0.6
Gm42397-201ENSMUST00000207472 Npm1Q61937 292 aaKnown RBP11.31□□□□□ -0.6
Gm42397-201ENSMUST00000207472 Cep164Q5DU05 1446 aa11.3□□□□□ -0.6
Gm42397-201ENSMUST00000207472 Ccdc18Q640L5 1455 aa11.27□□□□□ -0.61
Gm42397-201ENSMUST00000207472 Eif4g3Q80XI3 1579 aaKnown RBP11.22□□□□□ -0.61
Gm42397-201ENSMUST00000207472 Camsap1A2AHC3 1581 aa11.22□□□□□ -0.61
Gm42397-201ENSMUST00000207472 Fmn1Q05860 1466 aa11.22□□□□□ -0.61
Gm42397-201ENSMUST00000207472 Cngb1E1AZ71 1325 aa11.2□□□□□ -0.62
Gm42397-201ENSMUST00000207472 LrpprcQ6PB66 1392 aaKnown RBP11.18□□□□□ -0.62
Gm42397-201ENSMUST00000207472 Crocc2F6XLV1 1638 aa11.17□□□□□ -0.62
Gm42397-201ENSMUST00000207472 Dhx29Q6PGC1 1365 aaKnown RBP11.17□□□□□ -0.62
Gm42397-201ENSMUST00000207472 Urb2E9Q7L1 1524 aaKnown RBP11.15□□□□□ -0.62
Gm42397-201ENSMUST00000207472 Il27Q8K3I6 234 aa11.13□□□□□ -0.63
Gm42397-201ENSMUST00000207472 Plb1Q3TTY0 1478 aa11.12□□□□□ -0.63
Gm42397-201ENSMUST00000207472 PogzQ8BZH4 1409 aaKnown RBP11.12□□□□□ -0.63
Gm42397-201ENSMUST00000207472 Ift140E9PY46 1464 aa11.09□□□□□ -0.63
Gm42397-201ENSMUST00000207472 Shroom2A2ALU4 1481 aa11.06□□□□□ -0.64
Gm42397-201ENSMUST00000207472 Duox2A2AQ99 1517 aa11.06□□□□□ -0.64
Gm42397-201ENSMUST00000207472 Grin2bQ01097 1482 aa11.05□□□□□ -0.64
Gm42397-201ENSMUST00000207472 Pbrm1Q8BSQ9 1634 aaKnown RBP11.04□□□□□ -0.64
Gm42397-201ENSMUST00000207472 Dnajc5P60904 198 aa11.04□□□□□ -0.64
Gm42397-201ENSMUST00000207472 Rusc2Q80U22 1514 aa11.03□□□□□ -0.64
Gm42397-201ENSMUST00000207472 Efcab5A0JP43 1406 aa11.02□□□□□ -0.65
Gm42397-201ENSMUST00000207472 Setd1bQ8CFT2 1985 aa11.01□□□□□ -0.65
Gm42397-201ENSMUST00000207472 Top2aQ01320 1528 aaKnown RBP11□□□□□ -0.65
Gm42397-201ENSMUST00000207472 NrkQ9R0G8 1455 aa10.97□□□□□ -0.65
Gm42397-201ENSMUST00000207472 Disp1Q3TDN0 1521 aa10.97□□□□□ -0.65
Gm42397-201ENSMUST00000207472 Ccdc88bQ4QRL3 1481 aa10.96□□□□□ -0.65
Gm42397-201ENSMUST00000207472 Samd9lQ69Z37 1561 aa10.96□□□□□ -0.66
Gm42397-201ENSMUST00000207472 Cc2d2bA0A286YDU8 1405 aa10.95□□□□□ -0.66
Gm42397-201ENSMUST00000207472 Nup160Q9Z0W3 1402 aaKnown RBP10.94□□□□□ -0.66
Gm42397-201ENSMUST00000207472 Pabpn1Q8CCS6 302 aaKnown RBP10.92□□□□□ -0.66
Gm42397-201ENSMUST00000207472 Shroom4Q1W617 1475 aa10.9□□□□□ -0.67
Gm42397-201ENSMUST00000207472 Gpatch8A2A6A1 1505 aa10.89□□□□□ -0.67
Gm42397-201ENSMUST00000207472 Grin2aP35436 1464 aa10.87□□□□□ -0.67
Gm42397-201ENSMUST00000207472 Col17a1Q07563 1470 aa10.87□□□□□ -0.67
Gm42397-201ENSMUST00000207472 Magi3Q9EQJ9 1476 aa10.86□□□□□ -0.67
Gm42397-201ENSMUST00000207472 Zcchc11B2RX14 1644 aaKnown RBP10.86□□□□□ -0.67
Gm42397-201ENSMUST00000207472 AqrQ8CFQ3 1481 aaKnown RBP10.86□□□□□ -0.67
Gm42397-201ENSMUST00000207472 Rad54l2Q99NG0 1466 aa10.85□□□□□ -0.67
Gm42397-201ENSMUST00000207472 SynmQ70IV5 1561 aa10.85□□□□□ -0.67
Gm42397-201ENSMUST00000207472 PtprkP35822 1457 aa10.82□□□□□ -0.68
Gm42397-201ENSMUST00000207472 Fgd6Q69ZL1 1399 aa10.81□□□□□ -0.68
Gm42397-201ENSMUST00000207472 Pelp1Q9DBD5 1123 aaKnown RBP10.8□□□□□ -0.68
Gm42397-201ENSMUST00000207472 Pla2r1Q62028 1487 aa10.79□□□□□ -0.68
Gm42397-201ENSMUST00000207472 HrcG5E8J6 738 aa10.77□□□□□ -0.69
Gm42397-201ENSMUST00000207472 Mroh2bQ7M6Y6 1581 aa10.76□□□□□ -0.69
Gm42397-201ENSMUST00000207472 Zeb1Q64318 1117 aa10.74□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 180.3 ms