RNA–Protein interactions for RNA: ENSMUST00000207178.1

Lmo1-202, Transcript of Rhombotin-1, mousemouse

APPRIS ALT1 TSL 2 BASIC

Gene Lmo1, Length 912 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo1-202ENSMUST00000207178 Gm35339A0A140LHH9 1649 aa46.56■■■■■ 5.04
Lmo1-202ENSMUST00000207178 NischQ80TM9 1593 aa45.45■■■■■ 4.87
Lmo1-202ENSMUST00000207178 Abcc9P70170 1546 aa44.52■■■■■ 4.72
Lmo1-202ENSMUST00000207178 Abcc8B2RUS7 1588 aa44.29■■■■■ 4.68
Lmo1-202ENSMUST00000207178 ScribQ80U72 1612 aa43.45■■■■■ 4.55
Lmo1-202ENSMUST00000207178 NacadQ5SWP3 1504 aa41.76■■■■■ 4.28
Lmo1-202ENSMUST00000207178 Kdm5dQ62240 1548 aa41.69■■■■■ 4.26
Lmo1-202ENSMUST00000207178 Dnajc5bQ9CQ94 199 aa41.27■■■■■ 4.2
Lmo1-202ENSMUST00000207178 Sycp2Q9CUU3 1500 aa41.05■■■■■ 4.16
Lmo1-202ENSMUST00000207178 BicraF8VPZ9 1578 aa40.74■■■■■ 4.11
Lmo1-202ENSMUST00000207178 Dcaf1Q80TR8 1506 aa40.52■■■■■ 4.08
Lmo1-202ENSMUST00000207178 Thoc2B1AZI6 1594 aaKnown RBP39.89■■■■□ 3.98
Lmo1-202ENSMUST00000207178 Pds5bQ4VA53 1446 aaKnown RBP39.65■■■■□ 3.94
Lmo1-202ENSMUST00000207178 Rb1cc1Q9ESK9 1588 aa39.55■■■■□ 3.92
Lmo1-202ENSMUST00000207178 Cc2d2aQ8CFW7 1633 aa39.16■■■■□ 3.86
Lmo1-202ENSMUST00000207178 Atad2bE9Q166 1460 aaKnown RBP39.1■■■■□ 3.85
Lmo1-202ENSMUST00000207178 Baz1aO88379 1555 aa38.87■■■■□ 3.81
Lmo1-202ENSMUST00000207178 Ercc6F8VPZ5 1481 aa38.8■■■■□ 3.8
Lmo1-202ENSMUST00000207178 Crybg2B7ZCC2 1516 aa38.78■■■■□ 3.8
Lmo1-202ENSMUST00000207178 Fam135aQ6NS59 1506 aa38.71■■■■□ 3.79
Lmo1-202ENSMUST00000207178 Ccdc180J3QNE4 1664 aa38.61■■■■□ 3.77
Lmo1-202ENSMUST00000207178 Smarca2Q6DIC0 1577 aa38.57■■■■□ 3.77
Lmo1-202ENSMUST00000207178 Zcchc6Q5BLK4 1491 aaKnown RBP38.5■■■■□ 3.75
Lmo1-202ENSMUST00000207178 Smarca4Q3TKT4 1613 aaKnown RBP38.39■■■■□ 3.74
Lmo1-202ENSMUST00000207178 Iqgap2Q3UQ44 1575 aa38.36■■■■□ 3.73
Lmo1-202ENSMUST00000207178 Dnajc5P60904 198 aa38.26■■■■□ 3.72
Lmo1-202ENSMUST00000207178 Wdr62Q3U3T8 1523 aa38.22■■■■□ 3.71
Lmo1-202ENSMUST00000207178 Frmpd1A2AKB4 1549 aa38.16■■■■□ 3.7
Lmo1-202ENSMUST00000207178 Phldb1Q6PDH0 1371 aaKnown RBP38.11■■■■□ 3.69
Lmo1-202ENSMUST00000207178 Rhox8Q6VSS7 320 aa38.1■■■■□ 3.69
Lmo1-202ENSMUST00000207178 Cecr2E9Q2Z1 1453 aa38.05■■■■□ 3.68
Lmo1-202ENSMUST00000207178 Baz1bQ9Z277 1479 aa38.05■■■■□ 3.68
Lmo1-202ENSMUST00000207178 Ubl4bQ9CQ84 188 aa37.78■■■■□ 3.64
Lmo1-202ENSMUST00000207178 Mrc2Q64449 1479 aa37.77■■■■□ 3.64
Lmo1-202ENSMUST00000207178 Trim41Q5NCC3 630 aa37.75■■■■□ 3.63
Lmo1-202ENSMUST00000207178 Unc13aQ4KUS2 1712 aa37.67■■■■□ 3.62
Lmo1-202ENSMUST00000207178 Lrriq1Q0P5X1 1673 aa37.09■■■■□ 3.53
Lmo1-202ENSMUST00000207178 CftrP26361 1476 aa36.92■■■■□ 3.5
Lmo1-202ENSMUST00000207178 Cttnbp2B9EJA2 1648 aa36.88■■■■□ 3.49
Lmo1-202ENSMUST00000207178 Rsf1E9PWW9 1441 aaKnown RBP36.85■■■■□ 3.49
Lmo1-202ENSMUST00000207178 Synj1Q8CHC4 1574 aa36.78■■■■□ 3.48
Lmo1-202ENSMUST00000207178 Shroom2A2ALU4 1481 aa36.66■■■■□ 3.46
Lmo1-202ENSMUST00000207178 Kif21aQ9QXL2 1672 aa36.66■■■■□ 3.46
Lmo1-202ENSMUST00000207178 Cux2P70298 1426 aa36.62■■■■□ 3.45
Lmo1-202ENSMUST00000207178 Eif4g3Q80XI3 1579 aaKnown RBP36.51■■■■□ 3.44
Lmo1-202ENSMUST00000207178 Col17a1Q07563 1470 aa36.41■■■■□ 3.42
Lmo1-202ENSMUST00000207178 Brd4Q9ESU6 1400 aaKnown RBP36.4■■■■□ 3.42
Lmo1-202ENSMUST00000207178 Kif15Q6P9L6 1387 aa36.39■■■■□ 3.42
Lmo1-202ENSMUST00000207178 Lamc3Q9R0B6 1581 aa36.06■■■■□ 3.36
Lmo1-202ENSMUST00000207178 Esf1Q3V1V3 845 aaKnown RBP36.05■■■■□ 3.36
Lmo1-202ENSMUST00000207178 Npm1Q61937 292 aaKnown RBP36.03■■■■□ 3.36
Lmo1-202ENSMUST00000207178 Urb2E9Q7L1 1524 aaKnown RBP36.03■■■■□ 3.36
Lmo1-202ENSMUST00000207178 Rtl1Q7M732 1744 aa36.03■■■■□ 3.36
Lmo1-202ENSMUST00000207178 Top2bQ64511 1612 aa36.01■■■■□ 3.36
Lmo1-202ENSMUST00000207178 Pabpn1Q8CCS6 302 aaKnown RBP35.99■■■■□ 3.35
Lmo1-202ENSMUST00000207178 Ccdc136Q3TVA9 1136 aa35.91■■■■□ 3.34
Lmo1-202ENSMUST00000207178 Plb1Q3TTY0 1478 aa35.9■■■■□ 3.34
Lmo1-202ENSMUST00000207178 Cep164Q5DU05 1446 aa35.89■■■■□ 3.34
Lmo1-202ENSMUST00000207178 Dhx29Q6PGC1 1365 aaKnown RBP35.77■■■■□ 3.32
Lmo1-202ENSMUST00000207178 Pelp1Q9DBD5 1123 aaKnown RBP35.69■■■■□ 3.3
Lmo1-202ENSMUST00000207178 Zcchc11B2RX14 1644 aaKnown RBP35.68■■■■□ 3.3
Lmo1-202ENSMUST00000207178 Rusc2Q80U22 1514 aa35.63■■■■□ 3.29
Lmo1-202ENSMUST00000207178 Crocc2F6XLV1 1638 aa35.6■■■■□ 3.29
Lmo1-202ENSMUST00000207178 Il27Q8K3I6 234 aa35.49■■■■□ 3.27
Lmo1-202ENSMUST00000207178 LrpprcQ6PB66 1392 aaKnown RBP35.49■■■■□ 3.27
Lmo1-202ENSMUST00000207178 Pcdh10E9PXQ7 1057 aa35.47■■■■□ 3.27
Lmo1-202ENSMUST00000207178 Ccdc18Q640L5 1455 aa35.46■■■■□ 3.27
Lmo1-202ENSMUST00000207178 Ift140E9PY46 1464 aa35.44■■■■□ 3.26
Lmo1-202ENSMUST00000207178 TnnQ80Z71 1560 aa35.38■■■■□ 3.25
Lmo1-202ENSMUST00000207178 Camsap1A2AHC3 1581 aa35.34■■■■□ 3.25
Lmo1-202ENSMUST00000207178 Arhgef5E9Q7D5 1581 aa35.27■■■■□ 3.24
Lmo1-202ENSMUST00000207178 PogzQ8BZH4 1409 aaKnown RBP35.23■■■■□ 3.23
Lmo1-202ENSMUST00000207178 Adgrl3Q80TS3 1537 aa35.17■■■■□ 3.22
Lmo1-202ENSMUST00000207178 Disp1Q3TDN0 1521 aa35.1■■■■□ 3.21
Lmo1-202ENSMUST00000207178 Duox2A2AQ99 1517 aa35.03■■■■□ 3.2
Lmo1-202ENSMUST00000207178 Setd1bQ8CFT2 1985 aa35■■■■□ 3.19
Lmo1-202ENSMUST00000207178 Ttbk1Q6PCN3 1308 aa34.98■■■■□ 3.19
Lmo1-202ENSMUST00000207178 Cep170Q6A065 1588 aa34.97■■■■□ 3.19
Lmo1-202ENSMUST00000207178 Nup160Q9Z0W3 1402 aaKnown RBP34.97■■■■□ 3.19
Lmo1-202ENSMUST00000207178 PtprkP35822 1457 aa34.96■■■■□ 3.19
Lmo1-202ENSMUST00000207178 Golga3P55937 1487 aa34.94■■■■□ 3.18
Lmo1-202ENSMUST00000207178 PtprtQ99M80 1454 aa34.9■■■■□ 3.18
Lmo1-202ENSMUST00000207178 Cc2d2bA0A286YDU8 1405 aa34.89■■■■□ 3.18
Lmo1-202ENSMUST00000207178 Gapvd1Q6PAR5 1458 aa34.87■■■■□ 3.17
Lmo1-202ENSMUST00000207178 Gm156Q58A37 223 aa34.87■■■■□ 3.17
Lmo1-202ENSMUST00000207178 Pbrm1Q8BSQ9 1634 aaKnown RBP34.85■■■■□ 3.17
Lmo1-202ENSMUST00000207178 Samd9lQ69Z37 1561 aa34.85■■■■□ 3.17
Lmo1-202ENSMUST00000207178 Grin2bQ01097 1482 aa34.73■■■■□ 3.15
Lmo1-202ENSMUST00000207178 Fgd6Q69ZL1 1399 aa34.71■■■■□ 3.15
Lmo1-202ENSMUST00000207178 Pprc1Q6NZN1 1644 aa34.66■■■■□ 3.14
Lmo1-202ENSMUST00000207178 AqrQ8CFQ3 1481 aaKnown RBP34.65■■■■□ 3.14
Lmo1-202ENSMUST00000207178 Cngb1E1AZ71 1325 aa34.63■■■■□ 3.13
Lmo1-202ENSMUST00000207178 Fmn1Q05860 1466 aa34.61■■■■□ 3.13
Lmo1-202ENSMUST00000207178 Rad54l2Q99NG0 1466 aa34.59■■■■□ 3.13
Lmo1-202ENSMUST00000207178 Grin2aP35436 1464 aa34.57■■■■□ 3.12
Lmo1-202ENSMUST00000207178 Magi3Q9EQJ9 1476 aa34.55■■■■□ 3.12
Lmo1-202ENSMUST00000207178 Abcc1O35379 1528 aa34.5■■■■□ 3.11
Lmo1-202ENSMUST00000207178 Efcab5A0JP43 1406 aa34.47■■■■□ 3.11
Lmo1-202ENSMUST00000207178 AknaQ80VW7 1404 aa34.47■■■■□ 3.11
Lmo1-202ENSMUST00000207178 Rapgef2Q8CHG7 1496 aa34.47■■■■□ 3.11
Retrieved 100 of 22,080 RNA–protein pairs in 9.3 ms