RNA–Protein interactions for RNA: ENSMUST00000199753.1

Trav7n-5-201, Transcript of T cell receptor alpha variable 7D-5 (Fragment), mousemouse

APPRIS P1 BASIC

Gene Trav7n-5, Length 340 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-5-201ENSMUST00000199753 Gm35339A0A140LHH9 1649 aa12.48□□□□□ -0.41
Trav7n-5-201ENSMUST00000199753 NischQ80TM9 1593 aa12.17□□□□□ -0.46
Trav7n-5-201ENSMUST00000199753 Abcc9P70170 1546 aa11.77□□□□□ -0.52
Trav7n-5-201ENSMUST00000199753 Abcc8B2RUS7 1588 aa11.77□□□□□ -0.53
Trav7n-5-201ENSMUST00000199753 ScribQ80U72 1612 aa11.47□□□□□ -0.57
Trav7n-5-201ENSMUST00000199753 NacadQ5SWP3 1504 aa11.01□□□□□ -0.65
Trav7n-5-201ENSMUST00000199753 Kdm5dQ62240 1548 aa11.01□□□□□ -0.65
Trav7n-5-201ENSMUST00000199753 Dcaf1Q80TR8 1506 aa10.84□□□□□ -0.67
Trav7n-5-201ENSMUST00000199753 Sycp2Q9CUU3 1500 aa10.8□□□□□ -0.68
Trav7n-5-201ENSMUST00000199753 BicraF8VPZ9 1578 aa10.72□□□□□ -0.69
Trav7n-5-201ENSMUST00000199753 Rb1cc1Q9ESK9 1588 aa10.63□□□□□ -0.71
Trav7n-5-201ENSMUST00000199753 Ccdc180J3QNE4 1664 aa10.58□□□□□ -0.72
Trav7n-5-201ENSMUST00000199753 Baz1aO88379 1555 aa10.44□□□□□ -0.74
Trav7n-5-201ENSMUST00000199753 Dnajc5bQ9CQ94 199 aa10.4□□□□□ -0.74
Trav7n-5-201ENSMUST00000199753 Crybg2B7ZCC2 1516 aa10.39□□□□□ -0.75
Trav7n-5-201ENSMUST00000199753 Thoc2B1AZI6 1594 aaKnown RBP10.37□□□□□ -0.75
Trav7n-5-201ENSMUST00000199753 Pds5bQ4VA53 1446 aaKnown RBP10.33□□□□□ -0.76
Trav7n-5-201ENSMUST00000199753 Rhox8Q6VSS7 320 aa10.31□□□□□ -0.76
Trav7n-5-201ENSMUST00000199753 Atad2bE9Q166 1460 aaKnown RBP10.24□□□□□ -0.77
Trav7n-5-201ENSMUST00000199753 Zcchc6Q5BLK4 1491 aaKnown RBP10.23□□□□□ -0.77
Trav7n-5-201ENSMUST00000199753 Cc2d2aQ8CFW7 1633 aa10.2□□□□□ -0.78
Trav7n-5-201ENSMUST00000199753 Smarca4Q3TKT4 1613 aaKnown RBP10.19□□□□□ -0.78
Trav7n-5-201ENSMUST00000199753 Smarca2Q6DIC0 1577 aa10.17□□□□□ -0.78
Trav7n-5-201ENSMUST00000199753 Iqgap2Q3UQ44 1575 aa10.15□□□□□ -0.78
Trav7n-5-201ENSMUST00000199753 Rtl1Q7M732 1744 aa10.15□□□□□ -0.78
Trav7n-5-201ENSMUST00000199753 Ercc6F8VPZ5 1481 aa10.13□□□□□ -0.79
Trav7n-5-201ENSMUST00000199753 Unc13aQ4KUS2 1712 aa10.1□□□□□ -0.79
Trav7n-5-201ENSMUST00000199753 Fam135aQ6NS59 1506 aa10.09□□□□□ -0.79
Trav7n-5-201ENSMUST00000199753 Cecr2E9Q2Z1 1453 aa10.08□□□□□ -0.8
Trav7n-5-201ENSMUST00000199753 Wdr62Q3U3T8 1523 aa10.05□□□□□ -0.8
Trav7n-5-201ENSMUST00000199753 Frmpd1A2AKB4 1549 aa10.02□□□□□ -0.81
Trav7n-5-201ENSMUST00000199753 Baz1bQ9Z277 1479 aa9.95□□□□□ -0.82
Trav7n-5-201ENSMUST00000199753 Cttnbp2B9EJA2 1648 aa9.93□□□□□ -0.82
Trav7n-5-201ENSMUST00000199753 Phldb1Q6PDH0 1371 aaKnown RBP9.92□□□□□ -0.82
Trav7n-5-201ENSMUST00000199753 Synj1Q8CHC4 1574 aa9.86□□□□□ -0.83
Trav7n-5-201ENSMUST00000199753 CftrP26361 1476 aa9.85□□□□□ -0.83
Trav7n-5-201ENSMUST00000199753 Mrc2Q64449 1479 aa9.81□□□□□ -0.84
Trav7n-5-201ENSMUST00000199753 Ubl4bQ9CQ84 188 aa9.8□□□□□ -0.84
Trav7n-5-201ENSMUST00000199753 Brd4Q9ESU6 1400 aaKnown RBP9.78□□□□□ -0.84
Trav7n-5-201ENSMUST00000199753 Lrriq1Q0P5X1 1673 aa9.71□□□□□ -0.85
Trav7n-5-201ENSMUST00000199753 Kif21aQ9QXL2 1672 aa9.67□□□□□ -0.86
Trav7n-5-201ENSMUST00000199753 Ccdc136Q3TVA9 1136 aa9.67□□□□□ -0.86
Trav7n-5-201ENSMUST00000199753 Lamc3Q9R0B6 1581 aa9.63□□□□□ -0.87
Trav7n-5-201ENSMUST00000199753 Rsf1E9PWW9 1441 aaKnown RBP9.6□□□□□ -0.87
Trav7n-5-201ENSMUST00000199753 Cux2P70298 1426 aa9.6□□□□□ -0.87
Trav7n-5-201ENSMUST00000199753 Kif15Q6P9L6 1387 aa9.58□□□□□ -0.88
Trav7n-5-201ENSMUST00000199753 Esf1Q3V1V3 845 aaKnown RBP9.57□□□□□ -0.88
Trav7n-5-201ENSMUST00000199753 Eif4g3Q80XI3 1579 aaKnown RBP9.54□□□□□ -0.88
Trav7n-5-201ENSMUST00000199753 Top2bQ64511 1612 aa9.54□□□□□ -0.88
Trav7n-5-201ENSMUST00000199753 Setd1bQ8CFT2 1985 aa9.54□□□□□ -0.88
Trav7n-5-201ENSMUST00000199753 Trim41Q5NCC3 630 aa9.52□□□□□ -0.89
Trav7n-5-201ENSMUST00000199753 TnnQ80Z71 1560 aa9.52□□□□□ -0.89
Trav7n-5-201ENSMUST00000199753 Dnajc5P60904 198 aa9.46□□□□□ -0.9
Trav7n-5-201ENSMUST00000199753 Npm1Q61937 292 aaKnown RBP9.45□□□□□ -0.9
Trav7n-5-201ENSMUST00000199753 Cep164Q5DU05 1446 aa9.45□□□□□ -0.9
Trav7n-5-201ENSMUST00000199753 Camsap1A2AHC3 1581 aa9.45□□□□□ -0.9
Trav7n-5-201ENSMUST00000199753 Crocc2F6XLV1 1638 aa9.44□□□□□ -0.9
Trav7n-5-201ENSMUST00000199753 Urb2E9Q7L1 1524 aaKnown RBP9.43□□□□□ -0.9
Trav7n-5-201ENSMUST00000199753 Golga3P55937 1487 aa9.42□□□□□ -0.9
Trav7n-5-201ENSMUST00000199753 Ccdc18Q640L5 1455 aa9.42□□□□□ -0.9
Trav7n-5-201ENSMUST00000199753 Shroom2A2ALU4 1481 aa9.4□□□□□ -0.9
Trav7n-5-201ENSMUST00000199753 Dhx29Q6PGC1 1365 aaKnown RBP9.39□□□□□ -0.91
Trav7n-5-201ENSMUST00000199753 Plb1Q3TTY0 1478 aa9.38□□□□□ -0.91
Trav7n-5-201ENSMUST00000199753 LrpprcQ6PB66 1392 aaKnown RBP9.36□□□□□ -0.91
Trav7n-5-201ENSMUST00000199753 Fmn1Q05860 1466 aa9.34□□□□□ -0.91
Trav7n-5-201ENSMUST00000199753 Il27Q8K3I6 234 aa9.34□□□□□ -0.91
Trav7n-5-201ENSMUST00000199753 Rusc2Q80U22 1514 aa9.34□□□□□ -0.91
Trav7n-5-201ENSMUST00000199753 Cngb1E1AZ71 1325 aa9.32□□□□□ -0.92
Trav7n-5-201ENSMUST00000199753 Pbrm1Q8BSQ9 1634 aaKnown RBP9.32□□□□□ -0.92
Trav7n-5-201ENSMUST00000199753 PogzQ8BZH4 1409 aaKnown RBP9.31□□□□□ -0.92
Trav7n-5-201ENSMUST00000199753 Ift140E9PY46 1464 aa9.31□□□□□ -0.92
Trav7n-5-201ENSMUST00000199753 Duox2A2AQ99 1517 aa9.29□□□□□ -0.92
Trav7n-5-201ENSMUST00000199753 Samd9lQ69Z37 1561 aa9.28□□□□□ -0.92
Trav7n-5-201ENSMUST00000199753 Col17a1Q07563 1470 aa9.28□□□□□ -0.92
Trav7n-5-201ENSMUST00000199753 Grin2bQ01097 1482 aa9.26□□□□□ -0.93
Trav7n-5-201ENSMUST00000199753 Disp1Q3TDN0 1521 aa9.23□□□□□ -0.93
Trav7n-5-201ENSMUST00000199753 Pabpn1Q8CCS6 302 aaKnown RBP9.22□□□□□ -0.93
Trav7n-5-201ENSMUST00000199753 Zcchc11B2RX14 1644 aaKnown RBP9.21□□□□□ -0.93
Trav7n-5-201ENSMUST00000199753 Nup160Q9Z0W3 1402 aaKnown RBP9.2□□□□□ -0.94
Trav7n-5-201ENSMUST00000199753 Efcab5A0JP43 1406 aa9.19□□□□□ -0.94
Trav7n-5-201ENSMUST00000199753 Top2aQ01320 1528 aaKnown RBP9.18□□□□□ -0.94
Trav7n-5-201ENSMUST00000199753 Chd1P40201 1711 aa9.17□□□□□ -0.94
Trav7n-5-201ENSMUST00000199753 Cc2d2bA0A286YDU8 1405 aa9.17□□□□□ -0.94
Trav7n-5-201ENSMUST00000199753 Gpatch8A2A6A1 1505 aa9.16□□□□□ -0.94
Trav7n-5-201ENSMUST00000199753 Magi3Q9EQJ9 1476 aa9.16□□□□□ -0.94
Trav7n-5-201ENSMUST00000199753 Ccdc88bQ4QRL3 1481 aa9.15□□□□□ -0.94
Trav7n-5-201ENSMUST00000199753 Grin2aP35436 1464 aa9.15□□□□□ -0.95
Trav7n-5-201ENSMUST00000199753 NrkQ9R0G8 1455 aa9.15□□□□□ -0.95
Trav7n-5-201ENSMUST00000199753 Pelp1Q9DBD5 1123 aaKnown RBP9.14□□□□□ -0.95
Trav7n-5-201ENSMUST00000199753 Rad54l2Q99NG0 1466 aa9.14□□□□□ -0.95
Trav7n-5-201ENSMUST00000199753 AqrQ8CFQ3 1481 aaKnown RBP9.13□□□□□ -0.95
Trav7n-5-201ENSMUST00000199753 SynmQ70IV5 1561 aa9.12□□□□□ -0.95
Trav7n-5-201ENSMUST00000199753 Shroom4Q1W617 1475 aa9.1□□□□□ -0.95
Trav7n-5-201ENSMUST00000199753 Abca16E9PWJ7 1678 aa9.1□□□□□ -0.95
Trav7n-5-201ENSMUST00000199753 Cep170Q6A065 1588 aa9.09□□□□□ -0.95
Trav7n-5-201ENSMUST00000199753 PtprkP35822 1457 aa9.08□□□□□ -0.96
Trav7n-5-201ENSMUST00000199753 Pla2r1Q62028 1487 aa9.08□□□□□ -0.96
Trav7n-5-201ENSMUST00000199753 Dnmt1P13864 1620 aaKnown RBP9.07□□□□□ -0.96
Trav7n-5-201ENSMUST00000199753 Fgd6Q69ZL1 1399 aa9.07□□□□□ -0.96
Trav7n-5-201ENSMUST00000199753 WizO88286 1684 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 72.9 ms