RNA–Protein interactions for RNA: ENSMUST00000199240.4

Csde1-214, Transcript of Cold shock domain-containing protein E1, mousemouse

TSL 1 (best) BASIC

Gene Csde1, Length 3,457 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Csde1-214ENSMUST00000199240 Gm35339A0A140LHH9 1649 aa14.64□□□□□ -0.07
Csde1-214ENSMUST00000199240 NischQ80TM9 1593 aa14.31□□□□□ -0.12
Csde1-214ENSMUST00000199240 Abcc9P70170 1546 aa14.23□□□□□ -0.13
Csde1-214ENSMUST00000199240 Abcc8B2RUS7 1588 aa13.97□□□□□ -0.17
Csde1-214ENSMUST00000199240 ScribQ80U72 1612 aa13.72□□□□□ -0.21
Csde1-214ENSMUST00000199240 Dnajc5bQ9CQ94 199 aa13.31□□□□□ -0.28
Csde1-214ENSMUST00000199240 NacadQ5SWP3 1504 aa13.28□□□□□ -0.28
Csde1-214ENSMUST00000199240 Kdm5dQ62240 1548 aa13.18□□□□□ -0.3
Csde1-214ENSMUST00000199240 Sycp2Q9CUU3 1500 aa13.03□□□□□ -0.32
Csde1-214ENSMUST00000199240 BicraF8VPZ9 1578 aa12.9□□□□□ -0.34
Csde1-214ENSMUST00000199240 Dcaf1Q80TR8 1506 aa12.75□□□□□ -0.37
Csde1-214ENSMUST00000199240 Thoc2B1AZI6 1594 aaKnown RBP12.72□□□□□ -0.37
Csde1-214ENSMUST00000199240 Pds5bQ4VA53 1446 aaKnown RBP12.7□□□□□ -0.38
Csde1-214ENSMUST00000199240 Dnajc5P60904 198 aa12.55□□□□□ -0.4
Csde1-214ENSMUST00000199240 Cc2d2aQ8CFW7 1633 aa12.5□□□□□ -0.41
Csde1-214ENSMUST00000199240 Atad2bE9Q166 1460 aaKnown RBP12.47□□□□□ -0.41
Csde1-214ENSMUST00000199240 Rb1cc1Q9ESK9 1588 aa12.42□□□□□ -0.42
Csde1-214ENSMUST00000199240 Ercc6F8VPZ5 1481 aa12.42□□□□□ -0.42
Csde1-214ENSMUST00000199240 Fam135aQ6NS59 1506 aa12.35□□□□□ -0.43
Csde1-214ENSMUST00000199240 Trim41Q5NCC3 630 aa12.28□□□□□ -0.44
Csde1-214ENSMUST00000199240 Crybg2B7ZCC2 1516 aa12.25□□□□□ -0.45
Csde1-214ENSMUST00000199240 Smarca2Q6DIC0 1577 aa12.24□□□□□ -0.45
Csde1-214ENSMUST00000199240 Baz1aO88379 1555 aa12.22□□□□□ -0.45
Csde1-214ENSMUST00000199240 Baz1bQ9Z277 1479 aa12.21□□□□□ -0.45
Csde1-214ENSMUST00000199240 Phldb1Q6PDH0 1371 aaKnown RBP12.2□□□□□ -0.46
Csde1-214ENSMUST00000199240 Zcchc6Q5BLK4 1491 aaKnown RBP12.17□□□□□ -0.46
Csde1-214ENSMUST00000199240 Iqgap2Q3UQ44 1575 aa12.15□□□□□ -0.46
Csde1-214ENSMUST00000199240 Smarca4Q3TKT4 1613 aaKnown RBP12.15□□□□□ -0.46
Csde1-214ENSMUST00000199240 Ubl4bQ9CQ84 188 aa12.14□□□□□ -0.47
Csde1-214ENSMUST00000199240 Wdr62Q3U3T8 1523 aa12.13□□□□□ -0.47
Csde1-214ENSMUST00000199240 Frmpd1A2AKB4 1549 aa12.12□□□□□ -0.47
Csde1-214ENSMUST00000199240 Mrc2Q64449 1479 aa12.08□□□□□ -0.48
Csde1-214ENSMUST00000199240 Ccdc180J3QNE4 1664 aa12.08□□□□□ -0.48
Csde1-214ENSMUST00000199240 Rhox8Q6VSS7 320 aa11.99□□□□□ -0.49
Csde1-214ENSMUST00000199240 Cecr2E9Q2Z1 1453 aa11.99□□□□□ -0.49
Csde1-214ENSMUST00000199240 Unc13aQ4KUS2 1712 aa11.84□□□□□ -0.51
Csde1-214ENSMUST00000199240 Rsf1E9PWW9 1441 aaKnown RBP11.83□□□□□ -0.51
Csde1-214ENSMUST00000199240 Lrriq1Q0P5X1 1673 aa11.81□□□□□ -0.52
Csde1-214ENSMUST00000199240 Shroom2A2ALU4 1481 aa11.81□□□□□ -0.52
Csde1-214ENSMUST00000199240 Col17a1Q07563 1470 aa11.74□□□□□ -0.53
Csde1-214ENSMUST00000199240 Cux2P70298 1426 aa11.66□□□□□ -0.54
Csde1-214ENSMUST00000199240 Pabpn1Q8CCS6 302 aaKnown RBP11.66□□□□□ -0.54
Csde1-214ENSMUST00000199240 Eif4g3Q80XI3 1579 aaKnown RBP11.65□□□□□ -0.55
Csde1-214ENSMUST00000199240 CftrP26361 1476 aa11.63□□□□□ -0.55
Csde1-214ENSMUST00000199240 Kif21aQ9QXL2 1672 aa11.62□□□□□ -0.55
Csde1-214ENSMUST00000199240 Cttnbp2B9EJA2 1648 aa11.6□□□□□ -0.55
Csde1-214ENSMUST00000199240 Top2bQ64511 1612 aa11.58□□□□□ -0.56
Csde1-214ENSMUST00000199240 Kif15Q6P9L6 1387 aa11.57□□□□□ -0.56
Csde1-214ENSMUST00000199240 Npm1Q61937 292 aaKnown RBP11.55□□□□□ -0.56
Csde1-214ENSMUST00000199240 Synj1Q8CHC4 1574 aa11.54□□□□□ -0.56
Csde1-214ENSMUST00000199240 Pelp1Q9DBD5 1123 aaKnown RBP11.54□□□□□ -0.56
Csde1-214ENSMUST00000199240 Brd4Q9ESU6 1400 aaKnown RBP11.49□□□□□ -0.57
Csde1-214ENSMUST00000199240 Pcdh10E9PXQ7 1057 aa11.48□□□□□ -0.57
Csde1-214ENSMUST00000199240 Zcchc11B2RX14 1644 aaKnown RBP11.48□□□□□ -0.57
Csde1-214ENSMUST00000199240 Urb2E9Q7L1 1524 aaKnown RBP11.48□□□□□ -0.57
Csde1-214ENSMUST00000199240 Esf1Q3V1V3 845 aaKnown RBP11.47□□□□□ -0.57
Csde1-214ENSMUST00000199240 Plb1Q3TTY0 1478 aa11.46□□□□□ -0.58
Csde1-214ENSMUST00000199240 Cep164Q5DU05 1446 aa11.45□□□□□ -0.58
Csde1-214ENSMUST00000199240 Dhx29Q6PGC1 1365 aaKnown RBP11.39□□□□□ -0.59
Csde1-214ENSMUST00000199240 Lamc3Q9R0B6 1581 aa11.38□□□□□ -0.59
Csde1-214ENSMUST00000199240 Arhgef5E9Q7D5 1581 aa11.37□□□□□ -0.59
Csde1-214ENSMUST00000199240 Ttbk1Q6PCN3 1308 aa11.37□□□□□ -0.59
Csde1-214ENSMUST00000199240 Rusc2Q80U22 1514 aa11.33□□□□□ -0.59
Csde1-214ENSMUST00000199240 Adgrl3Q80TS3 1537 aa11.31□□□□□ -0.6
Csde1-214ENSMUST00000199240 Il27Q8K3I6 234 aa11.3□□□□□ -0.6
Csde1-214ENSMUST00000199240 Ift140E9PY46 1464 aa11.3□□□□□ -0.6
Csde1-214ENSMUST00000199240 Ccdc136Q3TVA9 1136 aa11.29□□□□□ -0.6
Csde1-214ENSMUST00000199240 Crocc2F6XLV1 1638 aa11.28□□□□□ -0.6
Csde1-214ENSMUST00000199240 LrpprcQ6PB66 1392 aaKnown RBP11.28□□□□□ -0.6
Csde1-214ENSMUST00000199240 Ccdc18Q640L5 1455 aa11.26□□□□□ -0.61
Csde1-214ENSMUST00000199240 PtprkP35822 1457 aa11.23□□□□□ -0.61
Csde1-214ENSMUST00000199240 Gm156Q58A37 223 aa11.22□□□□□ -0.61
Csde1-214ENSMUST00000199240 PtprtQ99M80 1454 aa11.22□□□□□ -0.61
Csde1-214ENSMUST00000199240 Cep170Q6A065 1588 aa11.18□□□□□ -0.62
Csde1-214ENSMUST00000199240 PogzQ8BZH4 1409 aaKnown RBP11.17□□□□□ -0.62
Csde1-214ENSMUST00000199240 Gapvd1Q6PAR5 1458 aa11.16□□□□□ -0.62
Csde1-214ENSMUST00000199240 Disp1Q3TDN0 1521 aa11.14□□□□□ -0.63
Csde1-214ENSMUST00000199240 Cc2d2bA0A286YDU8 1405 aa11.14□□□□□ -0.63
Csde1-214ENSMUST00000199240 Plekhg3Q4VAC9 1341 aa11.13□□□□□ -0.63
Csde1-214ENSMUST00000199240 Rtl1Q7M732 1744 aa11.13□□□□□ -0.63
Csde1-214ENSMUST00000199240 Camsap1A2AHC3 1581 aa11.12□□□□□ -0.63
Csde1-214ENSMUST00000199240 Golga3P55937 1487 aa11.11□□□□□ -0.63
Csde1-214ENSMUST00000199240 Fgd6Q69ZL1 1399 aa11.1□□□□□ -0.63
Csde1-214ENSMUST00000199240 Nup160Q9Z0W3 1402 aaKnown RBP11.1□□□□□ -0.63
Csde1-214ENSMUST00000199240 Duox2A2AQ99 1517 aa11.09□□□□□ -0.63
Csde1-214ENSMUST00000199240 TnnQ80Z71 1560 aa11.09□□□□□ -0.63
Csde1-214ENSMUST00000199240 Pprc1Q6NZN1 1644 aa11.05□□□□□ -0.64
Csde1-214ENSMUST00000199240 Pbrm1Q8BSQ9 1634 aaKnown RBP11.04□□□□□ -0.64
Csde1-214ENSMUST00000199240 Ythdc2B2RR83 1445 aaKnown RBP11.02□□□□□ -0.65
Csde1-214ENSMUST00000199240 Rapgef2Q8CHG7 1496 aa11.01□□□□□ -0.65
Csde1-214ENSMUST00000199240 Ppp1r18Q8BQ30 594 aa11.01□□□□□ -0.65
Csde1-214ENSMUST00000199240 AknaQ80VW7 1404 aa11.01□□□□□ -0.65
Csde1-214ENSMUST00000199240 AqrQ8CFQ3 1481 aaKnown RBP11.01□□□□□ -0.65
Csde1-214ENSMUST00000199240 Abcc1O35379 1528 aa11□□□□□ -0.65
Csde1-214ENSMUST00000199240 Setd1bQ8CFT2 1985 aa10.97□□□□□ -0.65
Csde1-214ENSMUST00000199240 Samd9lQ69Z37 1561 aa10.97□□□□□ -0.65
Csde1-214ENSMUST00000199240 CadpsQ80TJ1 1355 aa10.96□□□□□ -0.66
Csde1-214ENSMUST00000199240 Grin2bQ01097 1482 aa10.95□□□□□ -0.66
Csde1-214ENSMUST00000199240 Rad54l2Q99NG0 1466 aa10.95□□□□□ -0.66
Csde1-214ENSMUST00000199240 Setbp1Q9Z180 1582 aa10.94□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 12.6 ms