RNA–Protein interactions for RNA: ENSMUST00000197827.4

Csde1-207, Transcript of Cold shock domain-containing protein E1, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Csde1, Length 2,671 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Csde1-207ENSMUST00000197827 Gm35339A0A140LHH9 1649 aa24.12■■□□□ 1.45
Csde1-207ENSMUST00000197827 NischQ80TM9 1593 aa23.73■■□□□ 1.39
Csde1-207ENSMUST00000197827 Abcc8B2RUS7 1588 aa22.97■■□□□ 1.27
Csde1-207ENSMUST00000197827 Abcc9P70170 1546 aa22.96■■□□□ 1.27
Csde1-207ENSMUST00000197827 ScribQ80U72 1612 aa22.14■■□□□ 1.13
Csde1-207ENSMUST00000197827 NacadQ5SWP3 1504 aa21.49■■□□□ 1.03
Csde1-207ENSMUST00000197827 Kdm5dQ62240 1548 aa21.4■■□□□ 1.02
Csde1-207ENSMUST00000197827 Dcaf1Q80TR8 1506 aa21.2■□□□□ 0.98
Csde1-207ENSMUST00000197827 Sycp2Q9CUU3 1500 aa21.06■□□□□ 0.96
Csde1-207ENSMUST00000197827 BicraF8VPZ9 1578 aa20.75■□□□□ 0.91
Csde1-207ENSMUST00000197827 Rb1cc1Q9ESK9 1588 aa20.65■□□□□ 0.9
Csde1-207ENSMUST00000197827 Ccdc180J3QNE4 1664 aa20.49■□□□□ 0.87
Csde1-207ENSMUST00000197827 Crybg2B7ZCC2 1516 aa20.43■□□□□ 0.86
Csde1-207ENSMUST00000197827 Baz1aO88379 1555 aa20.4■□□□□ 0.86
Csde1-207ENSMUST00000197827 Rhox8Q6VSS7 320 aa20.37■□□□□ 0.85
Csde1-207ENSMUST00000197827 Pds5bQ4VA53 1446 aaKnown RBP20.23■□□□□ 0.83
Csde1-207ENSMUST00000197827 Dnajc5bQ9CQ94 199 aa20.16■□□□□ 0.82
Csde1-207ENSMUST00000197827 Thoc2B1AZI6 1594 aaKnown RBP20.04■□□□□ 0.8
Csde1-207ENSMUST00000197827 Zcchc6Q5BLK4 1491 aaKnown RBP20.03■□□□□ 0.8
Csde1-207ENSMUST00000197827 Atad2bE9Q166 1460 aaKnown RBP20.02■□□□□ 0.8
Csde1-207ENSMUST00000197827 Smarca4Q3TKT4 1613 aaKnown RBP19.82■□□□□ 0.76
Csde1-207ENSMUST00000197827 Smarca2Q6DIC0 1577 aa19.79■□□□□ 0.76
Csde1-207ENSMUST00000197827 Ercc6F8VPZ5 1481 aa19.76■□□□□ 0.75
Csde1-207ENSMUST00000197827 Iqgap2Q3UQ44 1575 aa19.7■□□□□ 0.74
Csde1-207ENSMUST00000197827 Cecr2E9Q2Z1 1453 aa19.69■□□□□ 0.74
Csde1-207ENSMUST00000197827 Cc2d2aQ8CFW7 1633 aa19.69■□□□□ 0.74
Csde1-207ENSMUST00000197827 Fam135aQ6NS59 1506 aa19.59■□□□□ 0.73
Csde1-207ENSMUST00000197827 Wdr62Q3U3T8 1523 aa19.55■□□□□ 0.72
Csde1-207ENSMUST00000197827 Frmpd1A2AKB4 1549 aa19.52■□□□□ 0.72
Csde1-207ENSMUST00000197827 Baz1bQ9Z277 1479 aa19.5■□□□□ 0.71
Csde1-207ENSMUST00000197827 Rtl1Q7M732 1744 aa19.46■□□□□ 0.71
Csde1-207ENSMUST00000197827 Phldb1Q6PDH0 1371 aaKnown RBP19.46■□□□□ 0.71
Csde1-207ENSMUST00000197827 CftrP26361 1476 aa19.29■□□□□ 0.68
Csde1-207ENSMUST00000197827 Cttnbp2B9EJA2 1648 aa19.28■□□□□ 0.68
Csde1-207ENSMUST00000197827 Brd4Q9ESU6 1400 aaKnown RBP19.25■□□□□ 0.67
Csde1-207ENSMUST00000197827 Unc13aQ4KUS2 1712 aa19.24■□□□□ 0.67
Csde1-207ENSMUST00000197827 Ubl4bQ9CQ84 188 aa19.24■□□□□ 0.67
Csde1-207ENSMUST00000197827 Synj1Q8CHC4 1574 aa19.2■□□□□ 0.66
Csde1-207ENSMUST00000197827 Mrc2Q64449 1479 aa19.12■□□□□ 0.65
Csde1-207ENSMUST00000197827 Ccdc136Q3TVA9 1136 aa19.07■□□□□ 0.64
Csde1-207ENSMUST00000197827 Trim41Q5NCC3 630 aa18.9■□□□□ 0.62
Csde1-207ENSMUST00000197827 Esf1Q3V1V3 845 aaKnown RBP18.89■□□□□ 0.62
Csde1-207ENSMUST00000197827 Rsf1E9PWW9 1441 aaKnown RBP18.85■□□□□ 0.61
Csde1-207ENSMUST00000197827 Cux2P70298 1426 aa18.79■□□□□ 0.6
Csde1-207ENSMUST00000197827 Kif15Q6P9L6 1387 aa18.78■□□□□ 0.6
Csde1-207ENSMUST00000197827 Lamc3Q9R0B6 1581 aa18.76■□□□□ 0.59
Csde1-207ENSMUST00000197827 Lrriq1Q0P5X1 1673 aa18.68■□□□□ 0.58
Csde1-207ENSMUST00000197827 Kif21aQ9QXL2 1672 aa18.63■□□□□ 0.57
Csde1-207ENSMUST00000197827 Npm1Q61937 292 aaKnown RBP18.61■□□□□ 0.57
Csde1-207ENSMUST00000197827 Cep164Q5DU05 1446 aa18.56■□□□□ 0.56
Csde1-207ENSMUST00000197827 Golga3P55937 1487 aa18.53■□□□□ 0.56
Csde1-207ENSMUST00000197827 Top2bQ64511 1612 aa18.53■□□□□ 0.56
Csde1-207ENSMUST00000197827 TnnQ80Z71 1560 aa18.52■□□□□ 0.56
Csde1-207ENSMUST00000197827 Ccdc18Q640L5 1455 aa18.47■□□□□ 0.55
Csde1-207ENSMUST00000197827 Eif4g3Q80XI3 1579 aaKnown RBP18.44■□□□□ 0.54
Csde1-207ENSMUST00000197827 Dhx29Q6PGC1 1365 aaKnown RBP18.39■□□□□ 0.54
Csde1-207ENSMUST00000197827 LrpprcQ6PB66 1392 aaKnown RBP18.39■□□□□ 0.53
Csde1-207ENSMUST00000197827 Camsap1A2AHC3 1581 aa18.38■□□□□ 0.53
Csde1-207ENSMUST00000197827 Dnajc5P60904 198 aa18.38■□□□□ 0.53
Csde1-207ENSMUST00000197827 Urb2E9Q7L1 1524 aaKnown RBP18.36■□□□□ 0.53
Csde1-207ENSMUST00000197827 Cngb1E1AZ71 1325 aa18.36■□□□□ 0.53
Csde1-207ENSMUST00000197827 Fmn1Q05860 1466 aa18.35■□□□□ 0.53
Csde1-207ENSMUST00000197827 Plb1Q3TTY0 1478 aa18.33■□□□□ 0.52
Csde1-207ENSMUST00000197827 Il27Q8K3I6 234 aa18.32■□□□□ 0.52
Csde1-207ENSMUST00000197827 Crocc2F6XLV1 1638 aa18.31■□□□□ 0.52
Csde1-207ENSMUST00000197827 Shroom2A2ALU4 1481 aa18.27■□□□□ 0.52
Csde1-207ENSMUST00000197827 PogzQ8BZH4 1409 aaKnown RBP18.27■□□□□ 0.51
Csde1-207ENSMUST00000197827 Ift140E9PY46 1464 aa18.22■□□□□ 0.51
Csde1-207ENSMUST00000197827 Duox2A2AQ99 1517 aa18.17■□□□□ 0.5
Csde1-207ENSMUST00000197827 Grin2bQ01097 1482 aa18.14■□□□□ 0.49
Csde1-207ENSMUST00000197827 Rusc2Q80U22 1514 aa18.13■□□□□ 0.49
Csde1-207ENSMUST00000197827 Efcab5A0JP43 1406 aa18.08■□□□□ 0.48
Csde1-207ENSMUST00000197827 Disp1Q3TDN0 1521 aa18.06■□□□□ 0.48
Csde1-207ENSMUST00000197827 Pabpn1Q8CCS6 302 aaKnown RBP18.06■□□□□ 0.48
Csde1-207ENSMUST00000197827 Pbrm1Q8BSQ9 1634 aaKnown RBP18.04■□□□□ 0.48
Csde1-207ENSMUST00000197827 Cc2d2bA0A286YDU8 1405 aa18■□□□□ 0.47
Csde1-207ENSMUST00000197827 Nup160Q9Z0W3 1402 aaKnown RBP18■□□□□ 0.47
Csde1-207ENSMUST00000197827 Setd1bQ8CFT2 1985 aa17.99■□□□□ 0.47
Csde1-207ENSMUST00000197827 Samd9lQ69Z37 1561 aa17.98■□□□□ 0.47
Csde1-207ENSMUST00000197827 Col17a1Q07563 1470 aa17.98■□□□□ 0.47
Csde1-207ENSMUST00000197827 NrkQ9R0G8 1455 aa17.97■□□□□ 0.47
Csde1-207ENSMUST00000197827 Top2aQ01320 1528 aaKnown RBP17.96■□□□□ 0.47
Csde1-207ENSMUST00000197827 Ccdc88bQ4QRL3 1481 aa17.96■□□□□ 0.47
Csde1-207ENSMUST00000197827 Zcchc11B2RX14 1644 aaKnown RBP17.87■□□□□ 0.45
Csde1-207ENSMUST00000197827 Grin2aP35436 1464 aa17.86■□□□□ 0.45
Csde1-207ENSMUST00000197827 Rad54l2Q99NG0 1466 aa17.86■□□□□ 0.45
Csde1-207ENSMUST00000197827 Magi3Q9EQJ9 1476 aa17.85■□□□□ 0.45
Csde1-207ENSMUST00000197827 Pelp1Q9DBD5 1123 aaKnown RBP17.85■□□□□ 0.45
Csde1-207ENSMUST00000197827 Shroom4Q1W617 1475 aa17.84■□□□□ 0.45
Csde1-207ENSMUST00000197827 AqrQ8CFQ3 1481 aaKnown RBP17.84■□□□□ 0.45
Csde1-207ENSMUST00000197827 Gpatch8A2A6A1 1505 aa17.82■□□□□ 0.44
Csde1-207ENSMUST00000197827 Chic1Q8CBW7 227 aa17.82■□□□□ 0.44
Csde1-207ENSMUST00000197827 Fgd6Q69ZL1 1399 aa17.79■□□□□ 0.44
Csde1-207ENSMUST00000197827 PtprkP35822 1457 aa17.78■□□□□ 0.44
Csde1-207ENSMUST00000197827 SynmQ70IV5 1561 aa17.76■□□□□ 0.43
Csde1-207ENSMUST00000197827 Pla2r1Q62028 1487 aa17.73■□□□□ 0.43
Csde1-207ENSMUST00000197827 Adgrl3Q80TS3 1537 aa17.62■□□□□ 0.41
Csde1-207ENSMUST00000197827 Gapvd1Q6PAR5 1458 aa17.62■□□□□ 0.41
Csde1-207ENSMUST00000197827 CadpsQ80TJ1 1355 aa17.62■□□□□ 0.41
Csde1-207ENSMUST00000197827 Mroh2bQ7M6Y6 1581 aa17.61■□□□□ 0.41
Retrieved 100 of 22,080 RNA–protein pairs in 6.6 ms