RNA–Protein interactions for RNA: ENSMUST00000193792.5

Sec61a2-209, Transcript of Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

TSL 1 (best) BASIC

Gene Sec61a2, Length 2,110 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2-209ENSMUST00000193792 Gm35339A0A140LHH9 1649 aa33.09■■■□□ 2.89
Sec61a2-209ENSMUST00000193792 NischQ80TM9 1593 aa32.65■■■□□ 2.82
Sec61a2-209ENSMUST00000193792 Abcc9P70170 1546 aa31.63■■■□□ 2.65
Sec61a2-209ENSMUST00000193792 Abcc8B2RUS7 1588 aa31.55■■■□□ 2.64
Sec61a2-209ENSMUST00000193792 ScribQ80U72 1612 aa30.28■■■□□ 2.44
Sec61a2-209ENSMUST00000193792 NacadQ5SWP3 1504 aa29.5■■■□□ 2.31
Sec61a2-209ENSMUST00000193792 Kdm5dQ62240 1548 aa29.36■■■□□ 2.29
Sec61a2-209ENSMUST00000193792 Dcaf1Q80TR8 1506 aa29.21■■■□□ 2.27
Sec61a2-209ENSMUST00000193792 Sycp2Q9CUU3 1500 aa28.87■■■□□ 2.21
Sec61a2-209ENSMUST00000193792 Rb1cc1Q9ESK9 1588 aa28.45■■■□□ 2.15
Sec61a2-209ENSMUST00000193792 BicraF8VPZ9 1578 aa28.36■■■□□ 2.13
Sec61a2-209ENSMUST00000193792 Rhox8Q6VSS7 320 aa28.22■■■□□ 2.11
Sec61a2-209ENSMUST00000193792 Ccdc180J3QNE4 1664 aa28.21■■■□□ 2.11
Sec61a2-209ENSMUST00000193792 Crybg2B7ZCC2 1516 aa28.12■■■□□ 2.09
Sec61a2-209ENSMUST00000193792 Baz1aO88379 1555 aa28.11■■■□□ 2.09
Sec61a2-209ENSMUST00000193792 Pds5bQ4VA53 1446 aaKnown RBP27.72■■■□□ 2.03
Sec61a2-209ENSMUST00000193792 Zcchc6Q5BLK4 1491 aaKnown RBP27.61■■■□□ 2.01
Sec61a2-209ENSMUST00000193792 Atad2bE9Q166 1460 aaKnown RBP27.45■■□□□ 1.99
Sec61a2-209ENSMUST00000193792 Thoc2B1AZI6 1594 aaKnown RBP27.37■■□□□ 1.97
Sec61a2-209ENSMUST00000193792 Dnajc5bQ9CQ94 199 aa27.31■■□□□ 1.96
Sec61a2-209ENSMUST00000193792 Smarca2Q6DIC0 1577 aa27.28■■□□□ 1.96
Sec61a2-209ENSMUST00000193792 Smarca4Q3TKT4 1613 aaKnown RBP27.22■■□□□ 1.95
Sec61a2-209ENSMUST00000193792 Ercc6F8VPZ5 1481 aa27.11■■□□□ 1.93
Sec61a2-209ENSMUST00000193792 Cecr2E9Q2Z1 1453 aa27.05■■□□□ 1.92
Sec61a2-209ENSMUST00000193792 Iqgap2Q3UQ44 1575 aa27.03■■□□□ 1.92
Sec61a2-209ENSMUST00000193792 Rtl1Q7M732 1744 aa26.89■■□□□ 1.9
Sec61a2-209ENSMUST00000193792 Cc2d2aQ8CFW7 1633 aa26.87■■□□□ 1.89
Sec61a2-209ENSMUST00000193792 Fam135aQ6NS59 1506 aa26.81■■□□□ 1.88
Sec61a2-209ENSMUST00000193792 Wdr62Q3U3T8 1523 aa26.8■■□□□ 1.88
Sec61a2-209ENSMUST00000193792 Baz1bQ9Z277 1479 aa26.75■■□□□ 1.87
Sec61a2-209ENSMUST00000193792 Frmpd1A2AKB4 1549 aa26.73■■□□□ 1.87
Sec61a2-209ENSMUST00000193792 Phldb1Q6PDH0 1371 aaKnown RBP26.66■■□□□ 1.86
Sec61a2-209ENSMUST00000193792 Brd4Q9ESU6 1400 aaKnown RBP26.6■■□□□ 1.85
Sec61a2-209ENSMUST00000193792 CftrP26361 1476 aa26.56■■□□□ 1.84
Sec61a2-209ENSMUST00000193792 Cttnbp2B9EJA2 1648 aa26.54■■□□□ 1.84
Sec61a2-209ENSMUST00000193792 Synj1Q8CHC4 1574 aa26.44■■□□□ 1.82
Sec61a2-209ENSMUST00000193792 Ccdc136Q3TVA9 1136 aa26.33■■□□□ 1.81
Sec61a2-209ENSMUST00000193792 Ubl4bQ9CQ84 188 aa26.33■■□□□ 1.81
Sec61a2-209ENSMUST00000193792 Unc13aQ4KUS2 1712 aa26.26■■□□□ 1.79
Sec61a2-209ENSMUST00000193792 Mrc2Q64449 1479 aa26.17■■□□□ 1.78
Sec61a2-209ENSMUST00000193792 Trim41Q5NCC3 630 aa26.16■■□□□ 1.78
Sec61a2-209ENSMUST00000193792 Esf1Q3V1V3 845 aaKnown RBP26.06■■□□□ 1.76
Sec61a2-209ENSMUST00000193792 Rsf1E9PWW9 1441 aaKnown RBP25.95■■□□□ 1.74
Sec61a2-209ENSMUST00000193792 Kif15Q6P9L6 1387 aa25.83■■□□□ 1.72
Sec61a2-209ENSMUST00000193792 Cux2P70298 1426 aa25.79■■□□□ 1.72
Sec61a2-209ENSMUST00000193792 Lamc3Q9R0B6 1581 aa25.78■■□□□ 1.72
Sec61a2-209ENSMUST00000193792 Golga3P55937 1487 aa25.64■■□□□ 1.69
Sec61a2-209ENSMUST00000193792 Npm1Q61937 292 aaKnown RBP25.55■■□□□ 1.68
Sec61a2-209ENSMUST00000193792 Top2bQ64511 1612 aa25.55■■□□□ 1.68
Sec61a2-209ENSMUST00000193792 Cep164Q5DU05 1446 aa25.53■■□□□ 1.68
Sec61a2-209ENSMUST00000193792 TnnQ80Z71 1560 aa25.51■■□□□ 1.67
Sec61a2-209ENSMUST00000193792 Lrriq1Q0P5X1 1673 aa25.5■■□□□ 1.67
Sec61a2-209ENSMUST00000193792 Kif21aQ9QXL2 1672 aa25.49■■□□□ 1.67
Sec61a2-209ENSMUST00000193792 Ccdc18Q640L5 1455 aa25.45■■□□□ 1.66
Sec61a2-209ENSMUST00000193792 Cngb1E1AZ71 1325 aa25.4■■□□□ 1.66
Sec61a2-209ENSMUST00000193792 Fmn1Q05860 1466 aa25.36■■□□□ 1.65
Sec61a2-209ENSMUST00000193792 Camsap1A2AHC3 1581 aa25.3■■□□□ 1.64
Sec61a2-209ENSMUST00000193792 LrpprcQ6PB66 1392 aaKnown RBP25.27■■□□□ 1.64
Sec61a2-209ENSMUST00000193792 Dhx29Q6PGC1 1365 aaKnown RBP25.26■■□□□ 1.63
Sec61a2-209ENSMUST00000193792 Eif4g3Q80XI3 1579 aaKnown RBP25.22■■□□□ 1.63
Sec61a2-209ENSMUST00000193792 Il27Q8K3I6 234 aa25.19■■□□□ 1.62
Sec61a2-209ENSMUST00000193792 Urb2E9Q7L1 1524 aaKnown RBP25.15■■□□□ 1.62
Sec61a2-209ENSMUST00000193792 Crocc2F6XLV1 1638 aa25.14■■□□□ 1.61
Sec61a2-209ENSMUST00000193792 PogzQ8BZH4 1409 aaKnown RBP25.12■■□□□ 1.61
Sec61a2-209ENSMUST00000193792 Plb1Q3TTY0 1478 aa25.12■■□□□ 1.61
Sec61a2-209ENSMUST00000193792 Ift140E9PY46 1464 aa25.03■■□□□ 1.6
Sec61a2-209ENSMUST00000193792 Grin2bQ01097 1482 aa24.98■■□□□ 1.59
Sec61a2-209ENSMUST00000193792 Duox2A2AQ99 1517 aa24.97■■□□□ 1.59
Sec61a2-209ENSMUST00000193792 Shroom2A2ALU4 1481 aa24.92■■□□□ 1.58
Sec61a2-209ENSMUST00000193792 Efcab5A0JP43 1406 aa24.89■■□□□ 1.57
Sec61a2-209ENSMUST00000193792 Rusc2Q80U22 1514 aa24.86■■□□□ 1.57
Sec61a2-209ENSMUST00000193792 Ccdc88bQ4QRL3 1481 aa24.84■■□□□ 1.57
Sec61a2-209ENSMUST00000193792 Top2aQ01320 1528 aaKnown RBP24.84■■□□□ 1.57
Sec61a2-209ENSMUST00000193792 Dnajc5P60904 198 aa24.8■■□□□ 1.56
Sec61a2-209ENSMUST00000193792 NrkQ9R0G8 1455 aa24.79■■□□□ 1.56
Sec61a2-209ENSMUST00000193792 Pbrm1Q8BSQ9 1634 aaKnown RBP24.77■■□□□ 1.56
Sec61a2-209ENSMUST00000193792 Disp1Q3TDN0 1521 aa24.77■■□□□ 1.56
Sec61a2-209ENSMUST00000193792 Samd9lQ69Z37 1561 aa24.72■■□□□ 1.55
Sec61a2-209ENSMUST00000193792 Cc2d2bA0A286YDU8 1405 aa24.72■■□□□ 1.55
Sec61a2-209ENSMUST00000193792 Nup160Q9Z0W3 1402 aaKnown RBP24.71■■□□□ 1.55
Sec61a2-209ENSMUST00000193792 Shroom4Q1W617 1475 aa24.63■■□□□ 1.53
Sec61a2-209ENSMUST00000193792 Chic1Q8CBW7 227 aa24.63■■□□□ 1.53
Sec61a2-209ENSMUST00000193792 Pabpn1Q8CCS6 302 aaKnown RBP24.63■■□□□ 1.53
Sec61a2-209ENSMUST00000193792 Grin2aP35436 1464 aa24.55■■□□□ 1.52
Sec61a2-209ENSMUST00000193792 Rad54l2Q99NG0 1466 aa24.53■■□□□ 1.52
Sec61a2-209ENSMUST00000193792 Magi3Q9EQJ9 1476 aa24.52■■□□□ 1.52
Sec61a2-209ENSMUST00000193792 Gpatch8A2A6A1 1505 aa24.52■■□□□ 1.52
Sec61a2-209ENSMUST00000193792 AqrQ8CFQ3 1481 aaKnown RBP24.51■■□□□ 1.51
Sec61a2-209ENSMUST00000193792 PtprkP35822 1457 aa24.49■■□□□ 1.51
Sec61a2-209ENSMUST00000193792 Setd1bQ8CFT2 1985 aa24.47■■□□□ 1.51
Sec61a2-209ENSMUST00000193792 SynmQ70IV5 1561 aa24.47■■□□□ 1.51
Sec61a2-209ENSMUST00000193792 Col17a1Q07563 1470 aa24.46■■□□□ 1.51
Sec61a2-209ENSMUST00000193792 HrcG5E8J6 738 aa24.43■■□□□ 1.5
Sec61a2-209ENSMUST00000193792 Fgd6Q69ZL1 1399 aa24.41■■□□□ 1.5
Sec61a2-209ENSMUST00000193792 Pelp1Q9DBD5 1123 aaKnown RBP24.4■■□□□ 1.5
Sec61a2-209ENSMUST00000193792 Pla2r1Q62028 1487 aa24.39■■□□□ 1.49
Sec61a2-209ENSMUST00000193792 Zcchc11B2RX14 1644 aaKnown RBP24.37■■□□□ 1.49
Sec61a2-209ENSMUST00000193792 Zeb1Q64318 1117 aa24.34■■□□□ 1.49
Sec61a2-209ENSMUST00000193792 Mroh2bQ7M6Y6 1581 aa24.3■■□□□ 1.48
Sec61a2-209ENSMUST00000193792 Npm2Q80W85 207 aa24.28■■□□□ 1.48
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms