RNA–Protein interactions for RNA: ENSMUST00000188230.1

Gm9540-201, mousemouse

BASIC

Gene Gm9540, Length 478 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm9540-201ENSMUST00000188230 Gm35339A0A140LHH9 1649 aa27.73■■■□□ 2.03
Gm9540-201ENSMUST00000188230 NischQ80TM9 1593 aa26.97■■□□□ 1.91
Gm9540-201ENSMUST00000188230 Abcc9P70170 1546 aa26.65■■□□□ 1.86
Gm9540-201ENSMUST00000188230 Abcc8B2RUS7 1588 aa26.33■■□□□ 1.8
Gm9540-201ENSMUST00000188230 ScribQ80U72 1612 aa25.96■■□□□ 1.75
Gm9540-201ENSMUST00000188230 NacadQ5SWP3 1504 aa24.87■■□□□ 1.57
Gm9540-201ENSMUST00000188230 Kdm5dQ62240 1548 aa24.86■■□□□ 1.57
Gm9540-201ENSMUST00000188230 Dnajc5bQ9CQ94 199 aa24.84■■□□□ 1.57
Gm9540-201ENSMUST00000188230 Sycp2Q9CUU3 1500 aa24.46■■□□□ 1.51
Gm9540-201ENSMUST00000188230 BicraF8VPZ9 1578 aa24.33■■□□□ 1.49
Gm9540-201ENSMUST00000188230 Dcaf1Q80TR8 1506 aa24.06■■□□□ 1.44
Gm9540-201ENSMUST00000188230 Thoc2B1AZI6 1594 aaKnown RBP23.91■■□□□ 1.42
Gm9540-201ENSMUST00000188230 Pds5bQ4VA53 1446 aaKnown RBP23.67■■□□□ 1.38
Gm9540-201ENSMUST00000188230 Rb1cc1Q9ESK9 1588 aa23.48■■□□□ 1.35
Gm9540-201ENSMUST00000188230 Cc2d2aQ8CFW7 1633 aa23.46■■□□□ 1.35
Gm9540-201ENSMUST00000188230 Atad2bE9Q166 1460 aaKnown RBP23.3■■□□□ 1.32
Gm9540-201ENSMUST00000188230 Dnajc5P60904 198 aa23.23■■□□□ 1.31
Gm9540-201ENSMUST00000188230 Ercc6F8VPZ5 1481 aa23.17■■□□□ 1.3
Gm9540-201ENSMUST00000188230 Fam135aQ6NS59 1506 aa23.16■■□□□ 1.3
Gm9540-201ENSMUST00000188230 Baz1aO88379 1555 aa23.05■■□□□ 1.28
Gm9540-201ENSMUST00000188230 Smarca2Q6DIC0 1577 aa23■■□□□ 1.27
Gm9540-201ENSMUST00000188230 Crybg2B7ZCC2 1516 aa22.97■■□□□ 1.27
Gm9540-201ENSMUST00000188230 Ccdc180J3QNE4 1664 aa22.9■■□□□ 1.26
Gm9540-201ENSMUST00000188230 Iqgap2Q3UQ44 1575 aa22.87■■□□□ 1.25
Gm9540-201ENSMUST00000188230 Smarca4Q3TKT4 1613 aaKnown RBP22.86■■□□□ 1.25
Gm9540-201ENSMUST00000188230 Zcchc6Q5BLK4 1491 aaKnown RBP22.85■■□□□ 1.25
Gm9540-201ENSMUST00000188230 Trim41Q5NCC3 630 aa22.81■■□□□ 1.24
Gm9540-201ENSMUST00000188230 Wdr62Q3U3T8 1523 aa22.79■■□□□ 1.24
Gm9540-201ENSMUST00000188230 Frmpd1A2AKB4 1549 aa22.76■■□□□ 1.23
Gm9540-201ENSMUST00000188230 Phldb1Q6PDH0 1371 aaKnown RBP22.73■■□□□ 1.23
Gm9540-201ENSMUST00000188230 Baz1bQ9Z277 1479 aa22.71■■□□□ 1.23
Gm9540-201ENSMUST00000188230 Cecr2E9Q2Z1 1453 aa22.61■■□□□ 1.21
Gm9540-201ENSMUST00000188230 Mrc2Q64449 1479 aa22.58■■□□□ 1.2
Gm9540-201ENSMUST00000188230 Unc13aQ4KUS2 1712 aa22.54■■□□□ 1.2
Gm9540-201ENSMUST00000188230 Ubl4bQ9CQ84 188 aa22.53■■□□□ 1.2
Gm9540-201ENSMUST00000188230 Rhox8Q6VSS7 320 aa22.47■■□□□ 1.19
Gm9540-201ENSMUST00000188230 Lrriq1Q0P5X1 1673 aa22.22■■□□□ 1.15
Gm9540-201ENSMUST00000188230 Rsf1E9PWW9 1441 aaKnown RBP22.05■■□□□ 1.12
Gm9540-201ENSMUST00000188230 Shroom2A2ALU4 1481 aa22■■□□□ 1.11
Gm9540-201ENSMUST00000188230 Kif21aQ9QXL2 1672 aa21.93■■□□□ 1.1
Gm9540-201ENSMUST00000188230 Cttnbp2B9EJA2 1648 aa21.91■■□□□ 1.1
Gm9540-201ENSMUST00000188230 CftrP26361 1476 aa21.9■■□□□ 1.1
Gm9540-201ENSMUST00000188230 Col17a1Q07563 1470 aa21.88■■□□□ 1.09
Gm9540-201ENSMUST00000188230 Eif4g3Q80XI3 1579 aaKnown RBP21.87■■□□□ 1.09
Gm9540-201ENSMUST00000188230 Synj1Q8CHC4 1574 aa21.82■■□□□ 1.08
Gm9540-201ENSMUST00000188230 Cux2P70298 1426 aa21.8■■□□□ 1.08
Gm9540-201ENSMUST00000188230 Rtl1Q7M732 1744 aa21.71■■□□□ 1.07
Gm9540-201ENSMUST00000188230 Chic1Q8CBW7 227 aa21.65■■□□□ 1.06
Gm9540-201ENSMUST00000188230 Kif15Q6P9L6 1387 aa21.64■■□□□ 1.06
Gm9540-201ENSMUST00000188230 Top2bQ64511 1612 aa21.61■■□□□ 1.05
Gm9540-201ENSMUST00000188230 Pabpn1Q8CCS6 302 aaKnown RBP21.54■■□□□ 1.04
Gm9540-201ENSMUST00000188230 Brd4Q9ESU6 1400 aaKnown RBP21.53■■□□□ 1.04
Gm9540-201ENSMUST00000188230 Urb2E9Q7L1 1524 aaKnown RBP21.5■■□□□ 1.03
Gm9540-201ENSMUST00000188230 Lamc3Q9R0B6 1581 aa21.44■■□□□ 1.02
Gm9540-201ENSMUST00000188230 Npm1Q61937 292 aaKnown RBP21.41■■□□□ 1.02
Gm9540-201ENSMUST00000188230 Zcchc11B2RX14 1644 aaKnown RBP21.4■■□□□ 1.02
Gm9540-201ENSMUST00000188230 Plb1Q3TTY0 1478 aa21.4■■□□□ 1.02
Gm9540-201ENSMUST00000188230 Pelp1Q9DBD5 1123 aaKnown RBP21.38■■□□□ 1.01
Gm9540-201ENSMUST00000188230 Pcdh10E9PXQ7 1057 aa21.37■■□□□ 1.01
Gm9540-201ENSMUST00000188230 Esf1Q3V1V3 845 aaKnown RBP21.34■■□□□ 1.01
Gm9540-201ENSMUST00000188230 Cep164Q5DU05 1446 aa21.34■■□□□ 1.01
Gm9540-201ENSMUST00000188230 Dhx29Q6PGC1 1365 aaKnown RBP21.3■■□□□ 1
Gm9540-201ENSMUST00000188230 Rusc2Q80U22 1514 aa21.29■■□□□ 1
Gm9540-201ENSMUST00000188230 Crocc2F6XLV1 1638 aa21.22■□□□□ 0.99
Gm9540-201ENSMUST00000188230 Arhgef5E9Q7D5 1581 aa21.2■□□□□ 0.98
Gm9540-201ENSMUST00000188230 Mapk8ip2Q9ERE9 830 aa21.2■□□□□ 0.98
Gm9540-201ENSMUST00000188230 Ccdc136Q3TVA9 1136 aa21.18■□□□□ 0.98
Gm9540-201ENSMUST00000188230 Ift140E9PY46 1464 aa21.11■□□□□ 0.97
Gm9540-201ENSMUST00000188230 LrpprcQ6PB66 1392 aaKnown RBP21.1■□□□□ 0.97
Gm9540-201ENSMUST00000188230 Il27Q8K3I6 234 aa21.08■□□□□ 0.97
Gm9540-201ENSMUST00000188230 Adgrl3Q80TS3 1537 aa21.08■□□□□ 0.96
Gm9540-201ENSMUST00000188230 Ccdc18Q640L5 1455 aa21.05■□□□□ 0.96
Gm9540-201ENSMUST00000188230 Camsap1A2AHC3 1581 aa21■□□□□ 0.95
Gm9540-201ENSMUST00000188230 TnnQ80Z71 1560 aa21■□□□□ 0.95
Gm9540-201ENSMUST00000188230 Ttbk1Q6PCN3 1308 aa20.98■□□□□ 0.95
Gm9540-201ENSMUST00000188230 Setd1bQ8CFT2 1985 aa20.96■□□□□ 0.95
Gm9540-201ENSMUST00000188230 Cep170Q6A065 1588 aa20.94■□□□□ 0.94
Gm9540-201ENSMUST00000188230 PogzQ8BZH4 1409 aaKnown RBP20.94■□□□□ 0.94
Gm9540-201ENSMUST00000188230 PtprtQ99M80 1454 aa20.92■□□□□ 0.94
Gm9540-201ENSMUST00000188230 PtprkP35822 1457 aa20.9■□□□□ 0.94
Gm9540-201ENSMUST00000188230 Disp1Q3TDN0 1521 aa20.89■□□□□ 0.94
Gm9540-201ENSMUST00000188230 Gm156Q58A37 223 aa20.85■□□□□ 0.93
Gm9540-201ENSMUST00000188230 Gapvd1Q6PAR5 1458 aa20.84■□□□□ 0.93
Gm9540-201ENSMUST00000188230 Duox2A2AQ99 1517 aa20.82■□□□□ 0.92
Gm9540-201ENSMUST00000188230 Nup160Q9Z0W3 1402 aaKnown RBP20.81■□□□□ 0.92
Gm9540-201ENSMUST00000188230 Golga3P55937 1487 aa20.79■□□□□ 0.92
Gm9540-201ENSMUST00000188230 Pprc1Q6NZN1 1644 aa20.78■□□□□ 0.92
Gm9540-201ENSMUST00000188230 Pbrm1Q8BSQ9 1634 aaKnown RBP20.77■□□□□ 0.92
Gm9540-201ENSMUST00000188230 Cc2d2bA0A286YDU8 1405 aa20.77■□□□□ 0.91
Gm9540-201ENSMUST00000188230 Samd9lQ69Z37 1561 aa20.75■□□□□ 0.91
Gm9540-201ENSMUST00000188230 Fgd6Q69ZL1 1399 aa20.68■□□□□ 0.9
Gm9540-201ENSMUST00000188230 AqrQ8CFQ3 1481 aaKnown RBP20.63■□□□□ 0.89
Gm9540-201ENSMUST00000188230 Rapgef2Q8CHG7 1496 aa20.61■□□□□ 0.89
Gm9540-201ENSMUST00000188230 Abcc1O35379 1528 aa20.6■□□□□ 0.89
Gm9540-201ENSMUST00000188230 Grin2bQ01097 1482 aa20.6■□□□□ 0.89
Gm9540-201ENSMUST00000188230 Rad54l2Q99NG0 1466 aa20.57■□□□□ 0.88
Gm9540-201ENSMUST00000188230 AknaQ80VW7 1404 aa20.57■□□□□ 0.88
Gm9540-201ENSMUST00000188230 Ythdc2B2RR83 1445 aaKnown RBP20.56■□□□□ 0.88
Gm9540-201ENSMUST00000188230 Grin2aP35436 1464 aa20.56■□□□□ 0.88
Gm9540-201ENSMUST00000188230 Chd1P40201 1711 aa20.55■□□□□ 0.88
Retrieved 100 of 22,080 RNA–protein pairs in 36.8 ms