RNA–Protein interactions for RNA: ENSMUST00000187489.2

Gm28556-201, mousemouse

TSL 1 (best) BASIC

Gene Gm28556, Length 673 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28556-201ENSMUST00000187489 Gm35339A0A140LHH9 1649 aa15.71■□□□□ 0.11
Gm28556-201ENSMUST00000187489 NischQ80TM9 1593 aa15.61■□□□□ 0.09
Gm28556-201ENSMUST00000187489 Chic1Q8CBW7 227 aa15.43■□□□□ 0.06
Gm28556-201ENSMUST00000187489 Abcc9P70170 1546 aa15.1■□□□□ 0.01
Gm28556-201ENSMUST00000187489 Abcc8B2RUS7 1588 aa15.05■□□□□ -0
Gm28556-201ENSMUST00000187489 Mapk8ip2Q9ERE9 830 aa14.64□□□□□ -0.07
Gm28556-201ENSMUST00000187489 ScribQ80U72 1612 aa14.44□□□□□ -0.1
Gm28556-201ENSMUST00000187489 NacadQ5SWP3 1504 aa14.01□□□□□ -0.17
Gm28556-201ENSMUST00000187489 Kdm5dQ62240 1548 aa14□□□□□ -0.17
Gm28556-201ENSMUST00000187489 Dcaf1Q80TR8 1506 aa13.84□□□□□ -0.19
Gm28556-201ENSMUST00000187489 Phf23Q8BSN5 401 aa13.82□□□□□ -0.2
Gm28556-201ENSMUST00000187489 Sycp2Q9CUU3 1500 aa13.73□□□□□ -0.21
Gm28556-201ENSMUST00000187489 Rhox8Q6VSS7 320 aa13.71□□□□□ -0.21
Gm28556-201ENSMUST00000187489 Rb1cc1Q9ESK9 1588 aa13.62□□□□□ -0.23
Gm28556-201ENSMUST00000187489 Plppr3Q7TPB0 716 aa13.6□□□□□ -0.23
Gm28556-201ENSMUST00000187489 BicraF8VPZ9 1578 aa13.52□□□□□ -0.25
Gm28556-201ENSMUST00000187489 Baz1aO88379 1555 aa13.42□□□□□ -0.26
Gm28556-201ENSMUST00000187489 Ccdc180J3QNE4 1664 aa13.37□□□□□ -0.27
Gm28556-201ENSMUST00000187489 Gab3Q8BSM5 595 aa13.35□□□□□ -0.27
Gm28556-201ENSMUST00000187489 Crybg2B7ZCC2 1516 aa13.31□□□□□ -0.28
Gm28556-201ENSMUST00000187489 Zcchc6Q5BLK4 1491 aaKnown RBP13.27□□□□□ -0.29
Gm28556-201ENSMUST00000187489 Rtl1Q7M732 1744 aa13.13□□□□□ -0.31
Gm28556-201ENSMUST00000187489 Pds5bQ4VA53 1446 aaKnown RBP13.13□□□□□ -0.31
Gm28556-201ENSMUST00000187489 Dnajc5bQ9CQ94 199 aa13.05□□□□□ -0.32
Gm28556-201ENSMUST00000187489 Smarca2Q6DIC0 1577 aa13.03□□□□□ -0.32
Gm28556-201ENSMUST00000187489 Atad2bE9Q166 1460 aaKnown RBP13.03□□□□□ -0.32
Gm28556-201ENSMUST00000187489 Cecr2E9Q2Z1 1453 aa12.99□□□□□ -0.33
Gm28556-201ENSMUST00000187489 Smarca4Q3TKT4 1613 aaKnown RBP12.96□□□□□ -0.33
Gm28556-201ENSMUST00000187489 Thoc2B1AZI6 1594 aaKnown RBP12.95□□□□□ -0.34
Gm28556-201ENSMUST00000187489 Iqgap2Q3UQ44 1575 aa12.89□□□□□ -0.35
Gm28556-201ENSMUST00000187489 Ercc6F8VPZ5 1481 aa12.88□□□□□ -0.35
Gm28556-201ENSMUST00000187489 Ccdc136Q3TVA9 1136 aa12.81□□□□□ -0.36
Gm28556-201ENSMUST00000187489 Senp3Q9EP97 568 aaKnown RBP12.79□□□□□ -0.36
Gm28556-201ENSMUST00000187489 Cc2d2aQ8CFW7 1633 aa12.78□□□□□ -0.36
Gm28556-201ENSMUST00000187489 Frmpd1A2AKB4 1549 aa12.74□□□□□ -0.37
Gm28556-201ENSMUST00000187489 Wdr62Q3U3T8 1523 aa12.73□□□□□ -0.37
Gm28556-201ENSMUST00000187489 Brd4Q9ESU6 1400 aaKnown RBP12.71□□□□□ -0.38
Gm28556-201ENSMUST00000187489 CftrP26361 1476 aa12.7□□□□□ -0.38
Gm28556-201ENSMUST00000187489 Synj1Q8CHC4 1574 aa12.69□□□□□ -0.38
Gm28556-201ENSMUST00000187489 Fam135aQ6NS59 1506 aa12.69□□□□□ -0.38
Gm28556-201ENSMUST00000187489 Cttnbp2B9EJA2 1648 aa12.66□□□□□ -0.38
Gm28556-201ENSMUST00000187489 Phldb1Q6PDH0 1371 aaKnown RBP12.65□□□□□ -0.38
Gm28556-201ENSMUST00000187489 Trim41Q5NCC3 630 aa12.58□□□□□ -0.4
Gm28556-201ENSMUST00000187489 Ubl4bQ9CQ84 188 aa12.58□□□□□ -0.4
Gm28556-201ENSMUST00000187489 Kcna4Q61423 654 aa12.57□□□□□ -0.4
Gm28556-201ENSMUST00000187489 Esf1Q3V1V3 845 aaKnown RBP12.56□□□□□ -0.4
Gm28556-201ENSMUST00000187489 Unc13aQ4KUS2 1712 aa12.55□□□□□ -0.4
Gm28556-201ENSMUST00000187489 Baz1bQ9Z277 1479 aa12.48□□□□□ -0.41
Gm28556-201ENSMUST00000187489 Mrc2Q64449 1479 aa12.41□□□□□ -0.42
Gm28556-201ENSMUST00000187489 Rsf1E9PWW9 1441 aaKnown RBP12.37□□□□□ -0.43
Gm28556-201ENSMUST00000187489 Kif15Q6P9L6 1387 aa12.36□□□□□ -0.43
Gm28556-201ENSMUST00000187489 Cngb1E1AZ71 1325 aa12.34□□□□□ -0.43
Gm28556-201ENSMUST00000187489 Cux2P70298 1426 aa12.32□□□□□ -0.44
Gm28556-201ENSMUST00000187489 Golga3P55937 1487 aa12.31□□□□□ -0.44
Gm28556-201ENSMUST00000187489 Lamc3Q9R0B6 1581 aa12.29□□□□□ -0.44
Gm28556-201ENSMUST00000187489 Top2bQ64511 1612 aa12.24□□□□□ -0.45
Gm28556-201ENSMUST00000187489 Npm1Q61937 292 aaKnown RBP12.22□□□□□ -0.45
Gm28556-201ENSMUST00000187489 Il27Q8K3I6 234 aa12.19□□□□□ -0.46
Gm28556-201ENSMUST00000187489 TnnQ80Z71 1560 aa12.18□□□□□ -0.46
Gm28556-201ENSMUST00000187489 Kif21aQ9QXL2 1672 aa12.17□□□□□ -0.46
Gm28556-201ENSMUST00000187489 Cep164Q5DU05 1446 aa12.16□□□□□ -0.46
Gm28556-201ENSMUST00000187489 Lrriq1Q0P5X1 1673 aa12.13□□□□□ -0.47
Gm28556-201ENSMUST00000187489 Fmn1Q05860 1466 aa12.13□□□□□ -0.47
Gm28556-201ENSMUST00000187489 Ccdc18Q640L5 1455 aa12.13□□□□□ -0.47
Gm28556-201ENSMUST00000187489 Camsap1A2AHC3 1581 aa12.09□□□□□ -0.47
Gm28556-201ENSMUST00000187489 Dhx29Q6PGC1 1365 aaKnown RBP12.06□□□□□ -0.48
Gm28556-201ENSMUST00000187489 LrpprcQ6PB66 1392 aaKnown RBP12.05□□□□□ -0.48
Gm28556-201ENSMUST00000187489 Ccdc88bQ4QRL3 1481 aa12.02□□□□□ -0.49
Gm28556-201ENSMUST00000187489 Plb1Q3TTY0 1478 aa12□□□□□ -0.49
Gm28556-201ENSMUST00000187489 Urb2E9Q7L1 1524 aaKnown RBP12□□□□□ -0.49
Gm28556-201ENSMUST00000187489 HrcG5E8J6 738 aa11.99□□□□□ -0.49
Gm28556-201ENSMUST00000187489 Crocc2F6XLV1 1638 aa11.98□□□□□ -0.49
Gm28556-201ENSMUST00000187489 PogzQ8BZH4 1409 aaKnown RBP11.97□□□□□ -0.49
Gm28556-201ENSMUST00000187489 Eif4g3Q80XI3 1579 aaKnown RBP11.95□□□□□ -0.5
Gm28556-201ENSMUST00000187489 Duox2A2AQ99 1517 aa11.94□□□□□ -0.5
Gm28556-201ENSMUST00000187489 Grin2bQ01097 1482 aa11.94□□□□□ -0.5
Gm28556-201ENSMUST00000187489 Rpgrip1Q9EPQ2 1331 aa11.92□□□□□ -0.5
Gm28556-201ENSMUST00000187489 Top2aQ01320 1528 aaKnown RBP11.91□□□□□ -0.5
Gm28556-201ENSMUST00000187489 Ift140E9PY46 1464 aa11.88□□□□□ -0.51
Gm28556-201ENSMUST00000187489 Efcab5A0JP43 1406 aa11.85□□□□□ -0.51
Gm28556-201ENSMUST00000187489 Samd9lQ69Z37 1561 aa11.83□□□□□ -0.52
Gm28556-201ENSMUST00000187489 NrkQ9R0G8 1455 aa11.83□□□□□ -0.52
Gm28556-201ENSMUST00000187489 Disp1Q3TDN0 1521 aa11.82□□□□□ -0.52
Gm28556-201ENSMUST00000187489 PtprkP35822 1457 aa11.81□□□□□ -0.52
Gm28556-201ENSMUST00000187489 Rusc2Q80U22 1514 aa11.8□□□□□ -0.52
Gm28556-201ENSMUST00000187489 Shroom4Q1W617 1475 aa11.79□□□□□ -0.52
Gm28556-201ENSMUST00000187489 Rad54l2Q99NG0 1466 aa11.79□□□□□ -0.52
Gm28556-201ENSMUST00000187489 Zeb1Q64318 1117 aa11.76□□□□□ -0.53
Gm28556-201ENSMUST00000187489 Npm2Q80W85 207 aa11.75□□□□□ -0.53
Gm28556-201ENSMUST00000187489 Nup160Q9Z0W3 1402 aaKnown RBP11.75□□□□□ -0.53
Gm28556-201ENSMUST00000187489 Pbrm1Q8BSQ9 1634 aaKnown RBP11.74□□□□□ -0.53
Gm28556-201ENSMUST00000187489 Shroom2A2ALU4 1481 aa11.73□□□□□ -0.53
Gm28556-201ENSMUST00000187489 Setd1bQ8CFT2 1985 aa11.72□□□□□ -0.53
Gm28556-201ENSMUST00000187489 Cc2d2bA0A286YDU8 1405 aa11.72□□□□□ -0.53
Gm28556-201ENSMUST00000187489 Grin2aP35436 1464 aa11.71□□□□□ -0.53
Gm28556-201ENSMUST00000187489 Magi3Q9EQJ9 1476 aa11.71□□□□□ -0.53
Gm28556-201ENSMUST00000187489 Pabpn1Q8CCS6 302 aaKnown RBP11.7□□□□□ -0.54
Gm28556-201ENSMUST00000187489 SynmQ70IV5 1561 aa11.7□□□□□ -0.54
Gm28556-201ENSMUST00000187489 Pelp1Q9DBD5 1123 aaKnown RBP11.69□□□□□ -0.54
Gm28556-201ENSMUST00000187489 Dnajc5P60904 198 aa11.67□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 156.2 ms