RNA–Protein interactions for RNA: ENSMUST00000180687.2

Trav6d-5-201, Transcript of T cell receptor alpha variable 6D-5 (Fragment), mousemouse

APPRIS P1 BASIC

Gene Trav6d-5, Length 338 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5-201ENSMUST00000180687 Gm35339A0A140LHH9 1649 aa16.77■□□□□ 0.27
Trav6d-5-201ENSMUST00000180687 NischQ80TM9 1593 aa16.39■□□□□ 0.21
Trav6d-5-201ENSMUST00000180687 Abcc8B2RUS7 1588 aa15.9■□□□□ 0.14
Trav6d-5-201ENSMUST00000180687 Abcc9P70170 1546 aa15.89■□□□□ 0.13
Trav6d-5-201ENSMUST00000180687 ScribQ80U72 1612 aa15.55■□□□□ 0.08
Trav6d-5-201ENSMUST00000180687 NacadQ5SWP3 1504 aa14.98□□□□□ -0.01
Trav6d-5-201ENSMUST00000180687 Kdm5dQ62240 1548 aa14.95□□□□□ -0.02
Trav6d-5-201ENSMUST00000180687 Sycp2Q9CUU3 1500 aa14.7□□□□□ -0.06
Trav6d-5-201ENSMUST00000180687 Dcaf1Q80TR8 1506 aa14.57□□□□□ -0.08
Trav6d-5-201ENSMUST00000180687 BicraF8VPZ9 1578 aa14.57□□□□□ -0.08
Trav6d-5-201ENSMUST00000180687 Dnajc5bQ9CQ94 199 aa14.54□□□□□ -0.08
Trav6d-5-201ENSMUST00000180687 Rb1cc1Q9ESK9 1588 aa14.3□□□□□ -0.12
Trav6d-5-201ENSMUST00000180687 Thoc2B1AZI6 1594 aaKnown RBP14.22□□□□□ -0.13
Trav6d-5-201ENSMUST00000180687 Pds5bQ4VA53 1446 aaKnown RBP14.19□□□□□ -0.14
Trav6d-5-201ENSMUST00000180687 Ccdc180J3QNE4 1664 aa14.06□□□□□ -0.16
Trav6d-5-201ENSMUST00000180687 Baz1aO88379 1555 aa14.04□□□□□ -0.16
Trav6d-5-201ENSMUST00000180687 Cc2d2aQ8CFW7 1633 aa14.01□□□□□ -0.17
Trav6d-5-201ENSMUST00000180687 Atad2bE9Q166 1460 aaKnown RBP13.99□□□□□ -0.17
Trav6d-5-201ENSMUST00000180687 Crybg2B7ZCC2 1516 aa13.98□□□□□ -0.17
Trav6d-5-201ENSMUST00000180687 Ercc6F8VPZ5 1481 aa13.93□□□□□ -0.18
Trav6d-5-201ENSMUST00000180687 Zcchc6Q5BLK4 1491 aaKnown RBP13.89□□□□□ -0.19
Trav6d-5-201ENSMUST00000180687 Rhox8Q6VSS7 320 aa13.88□□□□□ -0.19
Trav6d-5-201ENSMUST00000180687 Smarca2Q6DIC0 1577 aa13.84□□□□□ -0.19
Trav6d-5-201ENSMUST00000180687 Fam135aQ6NS59 1506 aa13.83□□□□□ -0.2
Trav6d-5-201ENSMUST00000180687 Smarca4Q3TKT4 1613 aaKnown RBP13.82□□□□□ -0.2
Trav6d-5-201ENSMUST00000180687 Iqgap2Q3UQ44 1575 aa13.79□□□□□ -0.2
Trav6d-5-201ENSMUST00000180687 Wdr62Q3U3T8 1523 aa13.69□□□□□ -0.22
Trav6d-5-201ENSMUST00000180687 Frmpd1A2AKB4 1549 aa13.65□□□□□ -0.22
Trav6d-5-201ENSMUST00000180687 Cecr2E9Q2Z1 1453 aa13.64□□□□□ -0.23
Trav6d-5-201ENSMUST00000180687 Baz1bQ9Z277 1479 aa13.63□□□□□ -0.23
Trav6d-5-201ENSMUST00000180687 Phldb1Q6PDH0 1371 aaKnown RBP13.63□□□□□ -0.23
Trav6d-5-201ENSMUST00000180687 Unc13aQ4KUS2 1712 aa13.59□□□□□ -0.23
Trav6d-5-201ENSMUST00000180687 Ubl4bQ9CQ84 188 aa13.53□□□□□ -0.24
Trav6d-5-201ENSMUST00000180687 Mrc2Q64449 1479 aa13.5□□□□□ -0.25
Trav6d-5-201ENSMUST00000180687 Dnajc5P60904 198 aa13.45□□□□□ -0.26
Trav6d-5-201ENSMUST00000180687 Trim41Q5NCC3 630 aa13.4□□□□□ -0.26
Trav6d-5-201ENSMUST00000180687 Cttnbp2B9EJA2 1648 aa13.35□□□□□ -0.27
Trav6d-5-201ENSMUST00000180687 Rtl1Q7M732 1744 aa13.32□□□□□ -0.28
Trav6d-5-201ENSMUST00000180687 Lrriq1Q0P5X1 1673 aa13.3□□□□□ -0.28
Trav6d-5-201ENSMUST00000180687 CftrP26361 1476 aa13.28□□□□□ -0.28
Trav6d-5-201ENSMUST00000180687 Synj1Q8CHC4 1574 aa13.27□□□□□ -0.29
Trav6d-5-201ENSMUST00000180687 Kif21aQ9QXL2 1672 aa13.18□□□□□ -0.3
Trav6d-5-201ENSMUST00000180687 Brd4Q9ESU6 1400 aaKnown RBP13.18□□□□□ -0.3
Trav6d-5-201ENSMUST00000180687 Rsf1E9PWW9 1441 aaKnown RBP13.16□□□□□ -0.3
Trav6d-5-201ENSMUST00000180687 Cux2P70298 1426 aa13.13□□□□□ -0.31
Trav6d-5-201ENSMUST00000180687 Eif4g3Q80XI3 1579 aaKnown RBP13.09□□□□□ -0.31
Trav6d-5-201ENSMUST00000180687 Kif15Q6P9L6 1387 aa13.07□□□□□ -0.32
Trav6d-5-201ENSMUST00000180687 Esf1Q3V1V3 845 aaKnown RBP13.07□□□□□ -0.32
Trav6d-5-201ENSMUST00000180687 Shroom2A2ALU4 1481 aa13.04□□□□□ -0.32
Trav6d-5-201ENSMUST00000180687 Ccdc136Q3TVA9 1136 aa13.03□□□□□ -0.32
Trav6d-5-201ENSMUST00000180687 Lamc3Q9R0B6 1581 aa12.98□□□□□ -0.33
Trav6d-5-201ENSMUST00000180687 Npm1Q61937 292 aaKnown RBP12.97□□□□□ -0.33
Trav6d-5-201ENSMUST00000180687 Cep164Q5DU05 1446 aa12.92□□□□□ -0.34
Trav6d-5-201ENSMUST00000180687 Col17a1Q07563 1470 aa12.91□□□□□ -0.34
Trav6d-5-201ENSMUST00000180687 Top2bQ64511 1612 aa12.9□□□□□ -0.34
Trav6d-5-201ENSMUST00000180687 Urb2E9Q7L1 1524 aaKnown RBP12.89□□□□□ -0.35
Trav6d-5-201ENSMUST00000180687 Pabpn1Q8CCS6 302 aaKnown RBP12.84□□□□□ -0.35
Trav6d-5-201ENSMUST00000180687 Plb1Q3TTY0 1478 aa12.84□□□□□ -0.35
Trav6d-5-201ENSMUST00000180687 Crocc2F6XLV1 1638 aa12.83□□□□□ -0.36
Trav6d-5-201ENSMUST00000180687 Dhx29Q6PGC1 1365 aaKnown RBP12.82□□□□□ -0.36
Trav6d-5-201ENSMUST00000180687 Ccdc18Q640L5 1455 aa12.81□□□□□ -0.36
Trav6d-5-201ENSMUST00000180687 Il27Q8K3I6 234 aa12.79□□□□□ -0.36
Trav6d-5-201ENSMUST00000180687 Pelp1Q9DBD5 1123 aaKnown RBP12.78□□□□□ -0.36
Trav6d-5-201ENSMUST00000180687 Rusc2Q80U22 1514 aa12.78□□□□□ -0.36
Trav6d-5-201ENSMUST00000180687 TnnQ80Z71 1560 aa12.77□□□□□ -0.37
Trav6d-5-201ENSMUST00000180687 Camsap1A2AHC3 1581 aa12.75□□□□□ -0.37
Trav6d-5-201ENSMUST00000180687 Zcchc11B2RX14 1644 aaKnown RBP12.74□□□□□ -0.37
Trav6d-5-201ENSMUST00000180687 LrpprcQ6PB66 1392 aaKnown RBP12.74□□□□□ -0.37
Trav6d-5-201ENSMUST00000180687 Ift140E9PY46 1464 aa12.72□□□□□ -0.37
Trav6d-5-201ENSMUST00000180687 Setd1bQ8CFT2 1985 aa12.69□□□□□ -0.38
Trav6d-5-201ENSMUST00000180687 PogzQ8BZH4 1409 aaKnown RBP12.64□□□□□ -0.39
Trav6d-5-201ENSMUST00000180687 Pbrm1Q8BSQ9 1634 aaKnown RBP12.61□□□□□ -0.39
Trav6d-5-201ENSMUST00000180687 Golga3P55937 1487 aa12.6□□□□□ -0.39
Trav6d-5-201ENSMUST00000180687 Duox2A2AQ99 1517 aa12.6□□□□□ -0.39
Trav6d-5-201ENSMUST00000180687 Cngb1E1AZ71 1325 aa12.6□□□□□ -0.39
Trav6d-5-201ENSMUST00000180687 Arhgef5E9Q7D5 1581 aa12.58□□□□□ -0.4
Trav6d-5-201ENSMUST00000180687 Disp1Q3TDN0 1521 aa12.57□□□□□ -0.4
Trav6d-5-201ENSMUST00000180687 Adgrl3Q80TS3 1537 aa12.54□□□□□ -0.4
Trav6d-5-201ENSMUST00000180687 Samd9lQ69Z37 1561 aa12.54□□□□□ -0.4
Trav6d-5-201ENSMUST00000180687 Fmn1Q05860 1466 aa12.53□□□□□ -0.4
Trav6d-5-201ENSMUST00000180687 Pcdh10E9PXQ7 1057 aa12.53□□□□□ -0.4
Trav6d-5-201ENSMUST00000180687 Ttbk1Q6PCN3 1308 aa12.53□□□□□ -0.4
Trav6d-5-201ENSMUST00000180687 Cc2d2bA0A286YDU8 1405 aa12.53□□□□□ -0.4
Trav6d-5-201ENSMUST00000180687 Nup160Q9Z0W3 1402 aaKnown RBP12.52□□□□□ -0.41
Trav6d-5-201ENSMUST00000180687 Cep170Q6A065 1588 aa12.52□□□□□ -0.41
Trav6d-5-201ENSMUST00000180687 Grin2bQ01097 1482 aa12.51□□□□□ -0.41
Trav6d-5-201ENSMUST00000180687 PtprkP35822 1457 aa12.5□□□□□ -0.41
Trav6d-5-201ENSMUST00000180687 Gapvd1Q6PAR5 1458 aa12.46□□□□□ -0.41
Trav6d-5-201ENSMUST00000180687 Fgd6Q69ZL1 1399 aa12.44□□□□□ -0.42
Trav6d-5-201ENSMUST00000180687 AqrQ8CFQ3 1481 aaKnown RBP12.44□□□□□ -0.42
Trav6d-5-201ENSMUST00000180687 Grin2aP35436 1464 aa12.43□□□□□ -0.42
Trav6d-5-201ENSMUST00000180687 PtprtQ99M80 1454 aa12.43□□□□□ -0.42
Trav6d-5-201ENSMUST00000180687 Rad54l2Q99NG0 1466 aa12.42□□□□□ -0.42
Trav6d-5-201ENSMUST00000180687 Gm156Q58A37 223 aa12.42□□□□□ -0.42
Trav6d-5-201ENSMUST00000180687 Efcab5A0JP43 1406 aa12.42□□□□□ -0.42
Trav6d-5-201ENSMUST00000180687 Chd1P40201 1711 aa12.41□□□□□ -0.42
Trav6d-5-201ENSMUST00000180687 Magi3Q9EQJ9 1476 aa12.4□□□□□ -0.43
Trav6d-5-201ENSMUST00000180687 AknaQ80VW7 1404 aa12.38□□□□□ -0.43
Trav6d-5-201ENSMUST00000180687 Abcc1O35379 1528 aa12.37□□□□□ -0.43
Trav6d-5-201ENSMUST00000180687 Pprc1Q6NZN1 1644 aa12.35□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 24.7 ms