RNA–Protein interactions for RNA: ENSMUST00000180140.7

Hcfc1r1-203, Transcript of Host cell factor C1 regulator 1, mousemouse

APPRIS P2 TSL 2 BASIC

Gene Hcfc1r1, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1r1-203ENSMUST00000180140 Gm35339A0A140LHH9 1649 aa27.95■■■□□ 2.06
Hcfc1r1-203ENSMUST00000180140 NischQ80TM9 1593 aa27.45■■□□□ 1.99
Hcfc1r1-203ENSMUST00000180140 Abcc8B2RUS7 1588 aa26.64■■□□□ 1.86
Hcfc1r1-203ENSMUST00000180140 Abcc9P70170 1546 aa26.52■■□□□ 1.84
Hcfc1r1-203ENSMUST00000180140 ScribQ80U72 1612 aa25.97■■□□□ 1.75
Hcfc1r1-203ENSMUST00000180140 NacadQ5SWP3 1504 aa24.99■■□□□ 1.59
Hcfc1r1-203ENSMUST00000180140 Kdm5dQ62240 1548 aa24.99■■□□□ 1.59
Hcfc1r1-203ENSMUST00000180140 Sycp2Q9CUU3 1500 aa24.55■■□□□ 1.52
Hcfc1r1-203ENSMUST00000180140 Dcaf1Q80TR8 1506 aa24.38■■□□□ 1.49
Hcfc1r1-203ENSMUST00000180140 BicraF8VPZ9 1578 aa24.34■■□□□ 1.49
Hcfc1r1-203ENSMUST00000180140 Dnajc5bQ9CQ94 199 aa24.27■■□□□ 1.48
Hcfc1r1-203ENSMUST00000180140 Rb1cc1Q9ESK9 1588 aa23.92■■□□□ 1.42
Hcfc1r1-203ENSMUST00000180140 Thoc2B1AZI6 1594 aaKnown RBP23.61■■□□□ 1.37
Hcfc1r1-203ENSMUST00000180140 Pds5bQ4VA53 1446 aaKnown RBP23.59■■□□□ 1.37
Hcfc1r1-203ENSMUST00000180140 Baz1aO88379 1555 aa23.52■■□□□ 1.36
Hcfc1r1-203ENSMUST00000180140 Rhox8Q6VSS7 320 aa23.43■■□□□ 1.34
Hcfc1r1-203ENSMUST00000180140 Ccdc180J3QNE4 1664 aa23.38■■□□□ 1.33
Hcfc1r1-203ENSMUST00000180140 Crybg2B7ZCC2 1516 aa23.37■■□□□ 1.33
Hcfc1r1-203ENSMUST00000180140 Atad2bE9Q166 1460 aaKnown RBP23.33■■□□□ 1.33
Hcfc1r1-203ENSMUST00000180140 Zcchc6Q5BLK4 1491 aaKnown RBP23.29■■□□□ 1.32
Hcfc1r1-203ENSMUST00000180140 Cc2d2aQ8CFW7 1633 aa23.25■■□□□ 1.31
Hcfc1r1-203ENSMUST00000180140 Ercc6F8VPZ5 1481 aa23.12■■□□□ 1.29
Hcfc1r1-203ENSMUST00000180140 Smarca2Q6DIC0 1577 aa23.07■■□□□ 1.28
Hcfc1r1-203ENSMUST00000180140 Smarca4Q3TKT4 1613 aaKnown RBP23.04■■□□□ 1.28
Hcfc1r1-203ENSMUST00000180140 Iqgap2Q3UQ44 1575 aa22.98■■□□□ 1.27
Hcfc1r1-203ENSMUST00000180140 Fam135aQ6NS59 1506 aa22.98■■□□□ 1.27
Hcfc1r1-203ENSMUST00000180140 Cecr2E9Q2Z1 1453 aa22.96■■□□□ 1.27
Hcfc1r1-203ENSMUST00000180140 Frmpd1A2AKB4 1549 aa22.82■■□□□ 1.24
Hcfc1r1-203ENSMUST00000180140 Wdr62Q3U3T8 1523 aa22.82■■□□□ 1.24
Hcfc1r1-203ENSMUST00000180140 Phldb1Q6PDH0 1371 aaKnown RBP22.7■■□□□ 1.22
Hcfc1r1-203ENSMUST00000180140 Unc13aQ4KUS2 1712 aa22.58■■□□□ 1.21
Hcfc1r1-203ENSMUST00000180140 Ubl4bQ9CQ84 188 aa22.57■■□□□ 1.2
Hcfc1r1-203ENSMUST00000180140 Baz1bQ9Z277 1479 aa22.5■■□□□ 1.19
Hcfc1r1-203ENSMUST00000180140 Mrc2Q64449 1479 aa22.44■■□□□ 1.18
Hcfc1r1-203ENSMUST00000180140 CftrP26361 1476 aa22.29■■□□□ 1.16
Hcfc1r1-203ENSMUST00000180140 Synj1Q8CHC4 1574 aa22.28■■□□□ 1.16
Hcfc1r1-203ENSMUST00000180140 Cttnbp2B9EJA2 1648 aa22.28■■□□□ 1.16
Hcfc1r1-203ENSMUST00000180140 Trim41Q5NCC3 630 aa22.21■■□□□ 1.15
Hcfc1r1-203ENSMUST00000180140 Dnajc5P60904 198 aa22.17■■□□□ 1.14
Hcfc1r1-203ENSMUST00000180140 Rtl1Q7M732 1744 aa22.14■■□□□ 1.14
Hcfc1r1-203ENSMUST00000180140 Brd4Q9ESU6 1400 aaKnown RBP22.07■■□□□ 1.12
Hcfc1r1-203ENSMUST00000180140 Lrriq1Q0P5X1 1673 aa22.04■■□□□ 1.12
Hcfc1r1-203ENSMUST00000180140 Ccdc136Q3TVA9 1136 aa22.03■■□□□ 1.12
Hcfc1r1-203ENSMUST00000180140 Cux2P70298 1426 aa21.95■■□□□ 1.1
Hcfc1r1-203ENSMUST00000180140 Kif21aQ9QXL2 1672 aa21.91■■□□□ 1.1
Hcfc1r1-203ENSMUST00000180140 Esf1Q3V1V3 845 aaKnown RBP21.89■■□□□ 1.09
Hcfc1r1-203ENSMUST00000180140 Kif15Q6P9L6 1387 aa21.87■■□□□ 1.09
Hcfc1r1-203ENSMUST00000180140 Rsf1E9PWW9 1441 aaKnown RBP21.85■■□□□ 1.09
Hcfc1r1-203ENSMUST00000180140 Lamc3Q9R0B6 1581 aa21.72■■□□□ 1.07
Hcfc1r1-203ENSMUST00000180140 Eif4g3Q80XI3 1579 aaKnown RBP21.68■■□□□ 1.06
Hcfc1r1-203ENSMUST00000180140 Npm1Q61937 292 aaKnown RBP21.66■■□□□ 1.06
Hcfc1r1-203ENSMUST00000180140 Shroom2A2ALU4 1481 aa21.55■■□□□ 1.04
Hcfc1r1-203ENSMUST00000180140 Cep164Q5DU05 1446 aa21.54■■□□□ 1.04
Hcfc1r1-203ENSMUST00000180140 Urb2E9Q7L1 1524 aaKnown RBP21.53■■□□□ 1.04
Hcfc1r1-203ENSMUST00000180140 Plb1Q3TTY0 1478 aa21.47■■□□□ 1.03
Hcfc1r1-203ENSMUST00000180140 Il27Q8K3I6 234 aa21.46■■□□□ 1.03
Hcfc1r1-203ENSMUST00000180140 Dhx29Q6PGC1 1365 aaKnown RBP21.45■■□□□ 1.02
Hcfc1r1-203ENSMUST00000180140 TnnQ80Z71 1560 aa21.38■■□□□ 1.01
Hcfc1r1-203ENSMUST00000180140 Col17a1Q07563 1470 aa21.38■■□□□ 1.01
Hcfc1r1-203ENSMUST00000180140 Crocc2F6XLV1 1638 aa21.36■■□□□ 1.01
Hcfc1r1-203ENSMUST00000180140 Ccdc18Q640L5 1455 aa21.35■■□□□ 1.01
Hcfc1r1-203ENSMUST00000180140 LrpprcQ6PB66 1392 aaKnown RBP21.32■■□□□ 1
Hcfc1r1-203ENSMUST00000180140 Camsap1A2AHC3 1581 aa21.31■■□□□ 1
Hcfc1r1-203ENSMUST00000180140 Pabpn1Q8CCS6 302 aaKnown RBP21.3■■□□□ 1
Hcfc1r1-203ENSMUST00000180140 Top2bQ64511 1612 aa21.28■■□□□ 1
Hcfc1r1-203ENSMUST00000180140 Rusc2Q80U22 1514 aa21.23■□□□□ 0.99
Hcfc1r1-203ENSMUST00000180140 Golga3P55937 1487 aa21.22■□□□□ 0.99
Hcfc1r1-203ENSMUST00000180140 Cngb1E1AZ71 1325 aa21.22■□□□□ 0.99
Hcfc1r1-203ENSMUST00000180140 Pelp1Q9DBD5 1123 aaKnown RBP21.21■□□□□ 0.99
Hcfc1r1-203ENSMUST00000180140 PogzQ8BZH4 1409 aaKnown RBP21.18■□□□□ 0.98
Hcfc1r1-203ENSMUST00000180140 Ift140E9PY46 1464 aa21.18■□□□□ 0.98
Hcfc1r1-203ENSMUST00000180140 Duox2A2AQ99 1517 aa21.09■□□□□ 0.97
Hcfc1r1-203ENSMUST00000180140 Disp1Q3TDN0 1521 aa21.05■□□□□ 0.96
Hcfc1r1-203ENSMUST00000180140 Setd1bQ8CFT2 1985 aa21.04■□□□□ 0.96
Hcfc1r1-203ENSMUST00000180140 Fmn1Q05860 1466 aa21.03■□□□□ 0.96
Hcfc1r1-203ENSMUST00000180140 Zcchc11B2RX14 1644 aaKnown RBP21■□□□□ 0.95
Hcfc1r1-203ENSMUST00000180140 Samd9lQ69Z37 1561 aa20.97■□□□□ 0.95
Hcfc1r1-203ENSMUST00000180140 Grin2bQ01097 1482 aa20.97■□□□□ 0.95
Hcfc1r1-203ENSMUST00000180140 Nup160Q9Z0W3 1402 aaKnown RBP20.93■□□□□ 0.94
Hcfc1r1-203ENSMUST00000180140 Pbrm1Q8BSQ9 1634 aaKnown RBP20.89■□□□□ 0.93
Hcfc1r1-203ENSMUST00000180140 Cc2d2bA0A286YDU8 1405 aa20.87■□□□□ 0.93
Hcfc1r1-203ENSMUST00000180140 Rad54l2Q99NG0 1466 aa20.86■□□□□ 0.93
Hcfc1r1-203ENSMUST00000180140 Pcdh10E9PXQ7 1057 aa20.84■□□□□ 0.93
Hcfc1r1-203ENSMUST00000180140 Adgrl3Q80TS3 1537 aa20.81■□□□□ 0.92
Hcfc1r1-203ENSMUST00000180140 Efcab5A0JP43 1406 aa20.78■□□□□ 0.92
Hcfc1r1-203ENSMUST00000180140 Grin2aP35436 1464 aa20.77■□□□□ 0.92
Hcfc1r1-203ENSMUST00000180140 Magi3Q9EQJ9 1476 aa20.77■□□□□ 0.92
Hcfc1r1-203ENSMUST00000180140 Cep170Q6A065 1588 aa20.76■□□□□ 0.91
Hcfc1r1-203ENSMUST00000180140 PtprkP35822 1457 aa20.76■□□□□ 0.91
Hcfc1r1-203ENSMUST00000180140 Arhgef5E9Q7D5 1581 aa20.76■□□□□ 0.91
Hcfc1r1-203ENSMUST00000180140 AqrQ8CFQ3 1481 aaKnown RBP20.75■□□□□ 0.91
Hcfc1r1-203ENSMUST00000180140 Fgd6Q69ZL1 1399 aa20.73■□□□□ 0.91
Hcfc1r1-203ENSMUST00000180140 Gapvd1Q6PAR5 1458 aa20.73■□□□□ 0.91
Hcfc1r1-203ENSMUST00000180140 Ttbk1Q6PCN3 1308 aa20.73■□□□□ 0.91
Hcfc1r1-203ENSMUST00000180140 Gm156Q58A37 223 aa20.7■□□□□ 0.9
Hcfc1r1-203ENSMUST00000180140 Ccdc88bQ4QRL3 1481 aa20.66■□□□□ 0.9
Hcfc1r1-203ENSMUST00000180140 PtprtQ99M80 1454 aa20.64■□□□□ 0.89
Hcfc1r1-203ENSMUST00000180140 AknaQ80VW7 1404 aa20.64■□□□□ 0.89
Hcfc1r1-203ENSMUST00000180140 Abcc1O35379 1528 aa20.61■□□□□ 0.89
Hcfc1r1-203ENSMUST00000180140 Pla2r1Q62028 1487 aa20.61■□□□□ 0.89
Retrieved 100 of 22,080 RNA–protein pairs in 32.4 ms