RNA–Protein interactions for RNA: ENSMUST00000178812.8

Ctnnb1-214, Transcript of Catenin beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctnnb1, Length 2,702 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctnnb1-214ENSMUST00000178812 NischQ80TM9 1593 aa25.56■■□□□ 1.68
Ctnnb1-214ENSMUST00000178812 Gm35339A0A140LHH9 1649 aa25.51■■□□□ 1.67
Ctnnb1-214ENSMUST00000178812 Abcc9P70170 1546 aa24.79■■□□□ 1.56
Ctnnb1-214ENSMUST00000178812 Abcc8B2RUS7 1588 aa24.5■■□□□ 1.51
Ctnnb1-214ENSMUST00000178812 ScribQ80U72 1612 aa23.19■■□□□ 1.3
Ctnnb1-214ENSMUST00000178812 Rhox8Q6VSS7 320 aa22.86■■□□□ 1.25
Ctnnb1-214ENSMUST00000178812 Dcaf1Q80TR8 1506 aa22.73■■□□□ 1.23
Ctnnb1-214ENSMUST00000178812 Kdm5dQ62240 1548 aa22.6■■□□□ 1.21
Ctnnb1-214ENSMUST00000178812 NacadQ5SWP3 1504 aa22.54■■□□□ 1.2
Ctnnb1-214ENSMUST00000178812 Rb1cc1Q9ESK9 1588 aa22.33■■□□□ 1.16
Ctnnb1-214ENSMUST00000178812 Sycp2Q9CUU3 1500 aa22.07■■□□□ 1.12
Ctnnb1-214ENSMUST00000178812 Ccdc180J3QNE4 1664 aa22.07■■□□□ 1.12
Ctnnb1-214ENSMUST00000178812 Baz1aO88379 1555 aa22.06■■□□□ 1.12
Ctnnb1-214ENSMUST00000178812 Rtl1Q7M732 1744 aa21.87■■□□□ 1.09
Ctnnb1-214ENSMUST00000178812 Crybg2B7ZCC2 1516 aa21.84■■□□□ 1.09
Ctnnb1-214ENSMUST00000178812 BicraF8VPZ9 1578 aa21.67■■□□□ 1.06
Ctnnb1-214ENSMUST00000178812 Zcchc6Q5BLK4 1491 aaKnown RBP21.65■■□□□ 1.06
Ctnnb1-214ENSMUST00000178812 Smarca2Q6DIC0 1577 aa21.5■■□□□ 1.03
Ctnnb1-214ENSMUST00000178812 Ccdc136Q3TVA9 1136 aa21.3■■□□□ 1
Ctnnb1-214ENSMUST00000178812 Cecr2E9Q2Z1 1453 aa21.18■□□□□ 0.98
Ctnnb1-214ENSMUST00000178812 Trim41Q5NCC3 630 aa20.95■□□□□ 0.94
Ctnnb1-214ENSMUST00000178812 Smarca4Q3TKT4 1613 aaKnown RBP20.95■□□□□ 0.94
Ctnnb1-214ENSMUST00000178812 Brd4Q9ESU6 1400 aaKnown RBP20.94■□□□□ 0.94
Ctnnb1-214ENSMUST00000178812 Pds5bQ4VA53 1446 aaKnown RBP20.88■□□□□ 0.93
Ctnnb1-214ENSMUST00000178812 Atad2bE9Q166 1460 aaKnown RBP20.84■□□□□ 0.93
Ctnnb1-214ENSMUST00000178812 Synj1Q8CHC4 1574 aa20.84■□□□□ 0.93
Ctnnb1-214ENSMUST00000178812 CftrP26361 1476 aa20.81■□□□□ 0.92
Ctnnb1-214ENSMUST00000178812 Iqgap2Q3UQ44 1575 aa20.74■□□□□ 0.91
Ctnnb1-214ENSMUST00000178812 Cttnbp2B9EJA2 1648 aa20.72■□□□□ 0.91
Ctnnb1-214ENSMUST00000178812 Esf1Q3V1V3 845 aaKnown RBP20.52■□□□□ 0.87
Ctnnb1-214ENSMUST00000178812 Golga3P55937 1487 aa20.48■□□□□ 0.87
Ctnnb1-214ENSMUST00000178812 HrcG5E8J6 738 aa20.47■□□□□ 0.87
Ctnnb1-214ENSMUST00000178812 Wdr62Q3U3T8 1523 aa20.45■□□□□ 0.86
Ctnnb1-214ENSMUST00000178812 Ercc6F8VPZ5 1481 aa20.45■□□□□ 0.86
Ctnnb1-214ENSMUST00000178812 Frmpd1A2AKB4 1549 aa20.45■□□□□ 0.86
Ctnnb1-214ENSMUST00000178812 Cngb1E1AZ71 1325 aa20.43■□□□□ 0.86
Ctnnb1-214ENSMUST00000178812 Thoc2B1AZI6 1594 aaKnown RBP20.42■□□□□ 0.86
Ctnnb1-214ENSMUST00000178812 Top2bQ64511 1612 aa20.34■□□□□ 0.85
Ctnnb1-214ENSMUST00000178812 Rsf1E9PWW9 1441 aaKnown RBP20.19■□□□□ 0.82
Ctnnb1-214ENSMUST00000178812 Ccdc88bQ4QRL3 1481 aa20.17■□□□□ 0.82
Ctnnb1-214ENSMUST00000178812 Unc13aQ4KUS2 1712 aa20.16■□□□□ 0.82
Ctnnb1-214ENSMUST00000178812 Cc2d2aQ8CFW7 1633 aa20.16■□□□□ 0.82
Ctnnb1-214ENSMUST00000178812 Phldb1Q6PDH0 1371 aaKnown RBP20.15■□□□□ 0.82
Ctnnb1-214ENSMUST00000178812 Chic1Q8CBW7 227 aa20.14■□□□□ 0.82
Ctnnb1-214ENSMUST00000178812 Cep164Q5DU05 1446 aa20.11■□□□□ 0.81
Ctnnb1-214ENSMUST00000178812 Fam135aQ6NS59 1506 aa20.1■□□□□ 0.81
Ctnnb1-214ENSMUST00000178812 Dnajc5bQ9CQ94 199 aa20.08■□□□□ 0.81
Ctnnb1-214ENSMUST00000178812 Fmn1Q05860 1466 aa20.08■□□□□ 0.81
Ctnnb1-214ENSMUST00000178812 Lamc3Q9R0B6 1581 aa20■□□□□ 0.79
Ctnnb1-214ENSMUST00000178812 TnnQ80Z71 1560 aa19.99■□□□□ 0.79
Ctnnb1-214ENSMUST00000178812 Kif15Q6P9L6 1387 aa19.97■□□□□ 0.79
Ctnnb1-214ENSMUST00000178812 Ubl4bQ9CQ84 188 aa19.96■□□□□ 0.79
Ctnnb1-214ENSMUST00000178812 Top2aQ01320 1528 aaKnown RBP19.86■□□□□ 0.77
Ctnnb1-214ENSMUST00000178812 Baz1bQ9Z277 1479 aa19.81■□□□□ 0.76
Ctnnb1-214ENSMUST00000178812 Cux2P70298 1426 aa19.79■□□□□ 0.76
Ctnnb1-214ENSMUST00000178812 Gab3Q8BSM5 595 aa19.77■□□□□ 0.76
Ctnnb1-214ENSMUST00000178812 Camsap1A2AHC3 1581 aa19.74■□□□□ 0.75
Ctnnb1-214ENSMUST00000178812 Ccdc18Q640L5 1455 aa19.71■□□□□ 0.75
Ctnnb1-214ENSMUST00000178812 Il27Q8K3I6 234 aa19.7■□□□□ 0.74
Ctnnb1-214ENSMUST00000178812 Mrc2Q64449 1479 aa19.66■□□□□ 0.74
Ctnnb1-214ENSMUST00000178812 Npm1Q61937 292 aaKnown RBP19.64■□□□□ 0.73
Ctnnb1-214ENSMUST00000178812 Rapgef2Q8CHG7 1496 aa19.58■□□□□ 0.72
Ctnnb1-214ENSMUST00000178812 Grin2bQ01097 1482 aa19.55■□□□□ 0.72
Ctnnb1-214ENSMUST00000178812 LrpprcQ6PB66 1392 aaKnown RBP19.52■□□□□ 0.72
Ctnnb1-214ENSMUST00000178812 NrkQ9R0G8 1455 aa19.51■□□□□ 0.71
Ctnnb1-214ENSMUST00000178812 PtprkP35822 1457 aa19.5■□□□□ 0.71
Ctnnb1-214ENSMUST00000178812 Shroom4Q1W617 1475 aa19.46■□□□□ 0.71
Ctnnb1-214ENSMUST00000178812 PogzQ8BZH4 1409 aaKnown RBP19.45■□□□□ 0.7
Ctnnb1-214ENSMUST00000178812 Npm2Q80W85 207 aa19.45■□□□□ 0.7
Ctnnb1-214ENSMUST00000178812 Kif21aQ9QXL2 1672 aa19.44■□□□□ 0.7
Ctnnb1-214ENSMUST00000178812 Cep162Q6ZQ06 1403 aa19.43■□□□□ 0.7
Ctnnb1-214ENSMUST00000178812 Dhx29Q6PGC1 1365 aaKnown RBP19.43■□□□□ 0.7
Ctnnb1-214ENSMUST00000178812 Duox2A2AQ99 1517 aa19.39■□□□□ 0.69
Ctnnb1-214ENSMUST00000178812 Efcab5A0JP43 1406 aa19.38■□□□□ 0.69
Ctnnb1-214ENSMUST00000178812 Eif4g1Q6NZJ6 1600 aaKnown RBP19.37■□□□□ 0.69
Ctnnb1-214ENSMUST00000178812 Arhgap35Q91YM2 1499 aa19.32■□□□□ 0.68
Ctnnb1-214ENSMUST00000178812 Crocc2F6XLV1 1638 aa19.31■□□□□ 0.68
Ctnnb1-214ENSMUST00000178812 Myt1lP97500 1187 aa19.27■□□□□ 0.67
Ctnnb1-214ENSMUST00000178812 Samd9lQ69Z37 1561 aa19.25■□□□□ 0.67
Ctnnb1-214ENSMUST00000178812 Mroh2bQ7M6Y6 1581 aa19.25■□□□□ 0.67
Ctnnb1-214ENSMUST00000178812 Map3k1P53349 1493 aa19.23■□□□□ 0.67
Ctnnb1-214ENSMUST00000178812 Plb1Q3TTY0 1478 aa19.22■□□□□ 0.67
Ctnnb1-214ENSMUST00000178812 Zeb1Q64318 1117 aa19.22■□□□□ 0.67
Ctnnb1-214ENSMUST00000178812 Urb2E9Q7L1 1524 aaKnown RBP19.2■□□□□ 0.66
Ctnnb1-214ENSMUST00000178812 Ehmt2Q9Z148 1263 aaKnown RBP19.18■□□□□ 0.66
Ctnnb1-214ENSMUST00000178812 Lrriq1Q0P5X1 1673 aa19.17■□□□□ 0.66
Ctnnb1-214ENSMUST00000178812 Rad54l2Q99NG0 1466 aa19.13■□□□□ 0.65
Ctnnb1-214ENSMUST00000178812 SynmQ70IV5 1561 aa19.13■□□□□ 0.65
Ctnnb1-214ENSMUST00000178812 Clip1Q922J3 1391 aa19.12■□□□□ 0.65
Ctnnb1-214ENSMUST00000178812 AqrQ8CFQ3 1481 aaKnown RBP19.1■□□□□ 0.65
Ctnnb1-214ENSMUST00000178812 Disp1Q3TDN0 1521 aa19.07■□□□□ 0.64
Ctnnb1-214ENSMUST00000178812 Carmil1Q6EDY6 1374 aa19.06■□□□□ 0.64
Ctnnb1-214ENSMUST00000178812 Ift140E9PY46 1464 aa19.05■□□□□ 0.64
Ctnnb1-214ENSMUST00000178812 Magi3Q9EQJ9 1476 aa19.03■□□□□ 0.64
Ctnnb1-214ENSMUST00000178812 Grin2aP35436 1464 aa19■□□□□ 0.63
Ctnnb1-214ENSMUST00000178812 Pla2r1Q62028 1487 aa19■□□□□ 0.63
Ctnnb1-214ENSMUST00000178812 Eea1Q8BL66 1411 aa18.97■□□□□ 0.63
Ctnnb1-214ENSMUST00000178812 Nup160Q9Z0W3 1402 aaKnown RBP18.95■□□□□ 0.62
Ctnnb1-214ENSMUST00000178812 Setd5Q5XJV7 1441 aa18.94■□□□□ 0.62
Ctnnb1-214ENSMUST00000178812 Setd1bQ8CFT2 1985 aa18.93■□□□□ 0.62
Retrieved 100 of 22,080 RNA–protein pairs in 70.2 ms