RNA–Protein interactions for RNA: ENSMUST00000174191.1

Apoe-208, Transcript of Apolipoprotein E, mousemouse

TSL 2 BASIC

Gene Apoe, Length 472 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Apoe-208ENSMUST00000174191 Gm35339A0A140LHH9 1649 aa28.34■■■□□ 2.13
Apoe-208ENSMUST00000174191 NischQ80TM9 1593 aa27.79■■■□□ 2.04
Apoe-208ENSMUST00000174191 Abcc8B2RUS7 1588 aa27.03■■□□□ 1.92
Apoe-208ENSMUST00000174191 Abcc9P70170 1546 aa26.89■■□□□ 1.89
Apoe-208ENSMUST00000174191 ScribQ80U72 1612 aa26.39■■□□□ 1.82
Apoe-208ENSMUST00000174191 Kdm5dQ62240 1548 aa25.35■■□□□ 1.65
Apoe-208ENSMUST00000174191 NacadQ5SWP3 1504 aa25.34■■□□□ 1.65
Apoe-208ENSMUST00000174191 Sycp2Q9CUU3 1500 aa24.92■■□□□ 1.58
Apoe-208ENSMUST00000174191 Dnajc5bQ9CQ94 199 aa24.76■■□□□ 1.55
Apoe-208ENSMUST00000174191 BicraF8VPZ9 1578 aa24.74■■□□□ 1.55
Apoe-208ENSMUST00000174191 Dcaf1Q80TR8 1506 aa24.73■■□□□ 1.55
Apoe-208ENSMUST00000174191 Rb1cc1Q9ESK9 1588 aa24.2■■□□□ 1.46
Apoe-208ENSMUST00000174191 Thoc2B1AZI6 1594 aaKnown RBP24.01■■□□□ 1.43
Apoe-208ENSMUST00000174191 Pds5bQ4VA53 1446 aaKnown RBP23.93■■□□□ 1.42
Apoe-208ENSMUST00000174191 Baz1aO88379 1555 aa23.8■■□□□ 1.4
Apoe-208ENSMUST00000174191 Crybg2B7ZCC2 1516 aa23.68■■□□□ 1.38
Apoe-208ENSMUST00000174191 Atad2bE9Q166 1460 aaKnown RBP23.67■■□□□ 1.38
Apoe-208ENSMUST00000174191 Ccdc180J3QNE4 1664 aa23.6■■□□□ 1.37
Apoe-208ENSMUST00000174191 Cc2d2aQ8CFW7 1633 aa23.59■■□□□ 1.37
Apoe-208ENSMUST00000174191 Rhox8Q6VSS7 320 aa23.57■■□□□ 1.36
Apoe-208ENSMUST00000174191 Zcchc6Q5BLK4 1491 aaKnown RBP23.54■■□□□ 1.36
Apoe-208ENSMUST00000174191 Ercc6F8VPZ5 1481 aa23.4■■□□□ 1.34
Apoe-208ENSMUST00000174191 Smarca2Q6DIC0 1577 aa23.4■■□□□ 1.34
Apoe-208ENSMUST00000174191 Fam135aQ6NS59 1506 aa23.34■■□□□ 1.33
Apoe-208ENSMUST00000174191 Smarca4Q3TKT4 1613 aaKnown RBP23.33■■□□□ 1.33
Apoe-208ENSMUST00000174191 Cecr2E9Q2Z1 1453 aa23.3■■□□□ 1.32
Apoe-208ENSMUST00000174191 Iqgap2Q3UQ44 1575 aa23.29■■□□□ 1.32
Apoe-208ENSMUST00000174191 Frmpd1A2AKB4 1549 aa23.17■■□□□ 1.3
Apoe-208ENSMUST00000174191 Wdr62Q3U3T8 1523 aa23.17■■□□□ 1.3
Apoe-208ENSMUST00000174191 Phldb1Q6PDH0 1371 aaKnown RBP23.02■■□□□ 1.28
Apoe-208ENSMUST00000174191 Unc13aQ4KUS2 1712 aa22.88■■□□□ 1.25
Apoe-208ENSMUST00000174191 Ubl4bQ9CQ84 188 aa22.85■■□□□ 1.25
Apoe-208ENSMUST00000174191 Baz1bQ9Z277 1479 aa22.82■■□□□ 1.24
Apoe-208ENSMUST00000174191 Mrc2Q64449 1479 aa22.76■■□□□ 1.23
Apoe-208ENSMUST00000174191 Dnajc5P60904 198 aa22.6■■□□□ 1.21
Apoe-208ENSMUST00000174191 CftrP26361 1476 aa22.6■■□□□ 1.21
Apoe-208ENSMUST00000174191 Synj1Q8CHC4 1574 aa22.55■■□□□ 1.2
Apoe-208ENSMUST00000174191 Trim41Q5NCC3 630 aa22.53■■□□□ 1.2
Apoe-208ENSMUST00000174191 Cttnbp2B9EJA2 1648 aa22.52■■□□□ 1.2
Apoe-208ENSMUST00000174191 Lrriq1Q0P5X1 1673 aa22.36■■□□□ 1.17
Apoe-208ENSMUST00000174191 Brd4Q9ESU6 1400 aaKnown RBP22.3■■□□□ 1.16
Apoe-208ENSMUST00000174191 Cux2P70298 1426 aa22.24■■□□□ 1.15
Apoe-208ENSMUST00000174191 Rtl1Q7M732 1744 aa22.23■■□□□ 1.15
Apoe-208ENSMUST00000174191 Ccdc136Q3TVA9 1136 aa22.21■■□□□ 1.15
Apoe-208ENSMUST00000174191 Kif21aQ9QXL2 1672 aa22.2■■□□□ 1.15
Apoe-208ENSMUST00000174191 Rsf1E9PWW9 1441 aaKnown RBP22.16■■□□□ 1.14
Apoe-208ENSMUST00000174191 Kif15Q6P9L6 1387 aa22.14■■□□□ 1.14
Apoe-208ENSMUST00000174191 Esf1Q3V1V3 845 aaKnown RBP22.04■■□□□ 1.12
Apoe-208ENSMUST00000174191 Lamc3Q9R0B6 1581 aa22■■□□□ 1.11
Apoe-208ENSMUST00000174191 Eif4g3Q80XI3 1579 aaKnown RBP21.99■■□□□ 1.11
Apoe-208ENSMUST00000174191 Shroom2A2ALU4 1481 aa21.91■■□□□ 1.1
Apoe-208ENSMUST00000174191 Npm1Q61937 292 aaKnown RBP21.87■■□□□ 1.09
Apoe-208ENSMUST00000174191 Urb2E9Q7L1 1524 aaKnown RBP21.85■■□□□ 1.09
Apoe-208ENSMUST00000174191 Plb1Q3TTY0 1478 aa21.79■■□□□ 1.08
Apoe-208ENSMUST00000174191 Cep164Q5DU05 1446 aa21.79■■□□□ 1.08
Apoe-208ENSMUST00000174191 Col17a1Q07563 1470 aa21.77■■□□□ 1.07
Apoe-208ENSMUST00000174191 Dhx29Q6PGC1 1365 aaKnown RBP21.74■■□□□ 1.07
Apoe-208ENSMUST00000174191 Il27Q8K3I6 234 aa21.67■■□□□ 1.06
Apoe-208ENSMUST00000174191 TnnQ80Z71 1560 aa21.66■■□□□ 1.06
Apoe-208ENSMUST00000174191 Crocc2F6XLV1 1638 aa21.61■■□□□ 1.05
Apoe-208ENSMUST00000174191 LrpprcQ6PB66 1392 aaKnown RBP21.61■■□□□ 1.05
Apoe-208ENSMUST00000174191 Pabpn1Q8CCS6 302 aaKnown RBP21.59■■□□□ 1.05
Apoe-208ENSMUST00000174191 Camsap1A2AHC3 1581 aa21.57■■□□□ 1.04
Apoe-208ENSMUST00000174191 Top2bQ64511 1612 aa21.56■■□□□ 1.04
Apoe-208ENSMUST00000174191 Ccdc18Q640L5 1455 aa21.56■■□□□ 1.04
Apoe-208ENSMUST00000174191 Rusc2Q80U22 1514 aa21.54■■□□□ 1.04
Apoe-208ENSMUST00000174191 PogzQ8BZH4 1409 aaKnown RBP21.46■■□□□ 1.03
Apoe-208ENSMUST00000174191 Ift140E9PY46 1464 aa21.46■■□□□ 1.03
Apoe-208ENSMUST00000174191 Golga3P55937 1487 aa21.45■■□□□ 1.03
Apoe-208ENSMUST00000174191 Pelp1Q9DBD5 1123 aaKnown RBP21.45■■□□□ 1.02
Apoe-208ENSMUST00000174191 Cngb1E1AZ71 1325 aa21.36■■□□□ 1.01
Apoe-208ENSMUST00000174191 Duox2A2AQ99 1517 aa21.36■■□□□ 1.01
Apoe-208ENSMUST00000174191 Disp1Q3TDN0 1521 aa21.36■■□□□ 1.01
Apoe-208ENSMUST00000174191 Zcchc11B2RX14 1644 aaKnown RBP21.33■■□□□ 1
Apoe-208ENSMUST00000174191 Setd1bQ8CFT2 1985 aa21.3■■□□□ 1
Apoe-208ENSMUST00000174191 Samd9lQ69Z37 1561 aa21.26■□□□□ 0.99
Apoe-208ENSMUST00000174191 Fmn1Q05860 1466 aa21.26■□□□□ 0.99
Apoe-208ENSMUST00000174191 Nup160Q9Z0W3 1402 aaKnown RBP21.24■□□□□ 0.99
Apoe-208ENSMUST00000174191 Grin2bQ01097 1482 aa21.23■□□□□ 0.99
Apoe-208ENSMUST00000174191 Pcdh10E9PXQ7 1057 aa21.22■□□□□ 0.99
Apoe-208ENSMUST00000174191 Cc2d2bA0A286YDU8 1405 aa21.14■□□□□ 0.98
Apoe-208ENSMUST00000174191 Rad54l2Q99NG0 1466 aa21.13■□□□□ 0.97
Apoe-208ENSMUST00000174191 Adgrl3Q80TS3 1537 aa21.13■□□□□ 0.97
Apoe-208ENSMUST00000174191 Pbrm1Q8BSQ9 1634 aaKnown RBP21.11■□□□□ 0.97
Apoe-208ENSMUST00000174191 Magi3Q9EQJ9 1476 aa21.07■□□□□ 0.96
Apoe-208ENSMUST00000174191 Arhgef5E9Q7D5 1581 aa21.07■□□□□ 0.96
Apoe-208ENSMUST00000174191 Cep170Q6A065 1588 aa21.06■□□□□ 0.96
Apoe-208ENSMUST00000174191 PtprkP35822 1457 aa21.05■□□□□ 0.96
Apoe-208ENSMUST00000174191 Efcab5A0JP43 1406 aa21.04■□□□□ 0.96
Apoe-208ENSMUST00000174191 Grin2aP35436 1464 aa21.04■□□□□ 0.96
Apoe-208ENSMUST00000174191 AqrQ8CFQ3 1481 aaKnown RBP21.03■□□□□ 0.96
Apoe-208ENSMUST00000174191 Gapvd1Q6PAR5 1458 aa21.02■□□□□ 0.96
Apoe-208ENSMUST00000174191 Gm156Q58A37 223 aa21.02■□□□□ 0.96
Apoe-208ENSMUST00000174191 Fgd6Q69ZL1 1399 aa21.01■□□□□ 0.95
Apoe-208ENSMUST00000174191 PtprtQ99M80 1454 aa20.97■□□□□ 0.95
Apoe-208ENSMUST00000174191 Ttbk1Q6PCN3 1308 aa20.94■□□□□ 0.94
Apoe-208ENSMUST00000174191 Pla2r1Q62028 1487 aa20.91■□□□□ 0.94
Apoe-208ENSMUST00000174191 Ccdc88bQ4QRL3 1481 aa20.9■□□□□ 0.94
Apoe-208ENSMUST00000174191 Abcc1O35379 1528 aa20.89■□□□□ 0.94
Apoe-208ENSMUST00000174191 Pprc1Q6NZN1 1644 aa20.89■□□□□ 0.93
Retrieved 100 of 22,080 RNA–protein pairs in 26.1 ms