RNA–Protein interactions for RNA: ENSMUST00000174064.8

Apoe-206, Transcript of Apolipoprotein E, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Apoe, Length 1,408 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Apoe-206ENSMUST00000174064 Gm35339A0A140LHH9 1649 aa44.96■■■■■ 4.79
Apoe-206ENSMUST00000174064 NischQ80TM9 1593 aa44.34■■■■■ 4.69
Apoe-206ENSMUST00000174064 Abcc8B2RUS7 1588 aa42.93■■■■■ 4.46
Apoe-206ENSMUST00000174064 Abcc9P70170 1546 aa42.86■■■■■ 4.45
Apoe-206ENSMUST00000174064 ScribQ80U72 1612 aa41.55■■■■■ 4.24
Apoe-206ENSMUST00000174064 NacadQ5SWP3 1504 aa40.17■■■■■ 4.02
Apoe-206ENSMUST00000174064 Kdm5dQ62240 1548 aa40.13■■■■■ 4.01
Apoe-206ENSMUST00000174064 Sycp2Q9CUU3 1500 aa39.42■■■■□ 3.9
Apoe-206ENSMUST00000174064 Dcaf1Q80TR8 1506 aa39.36■■■■□ 3.89
Apoe-206ENSMUST00000174064 BicraF8VPZ9 1578 aa38.92■■■■□ 3.82
Apoe-206ENSMUST00000174064 Rb1cc1Q9ESK9 1588 aa38.64■■■■□ 3.78
Apoe-206ENSMUST00000174064 Dnajc5bQ9CQ94 199 aa38.29■■■■□ 3.72
Apoe-206ENSMUST00000174064 Rhox8Q6VSS7 320 aa38.21■■■■□ 3.71
Apoe-206ENSMUST00000174064 Baz1aO88379 1555 aa38.05■■■■□ 3.68
Apoe-206ENSMUST00000174064 Ccdc180J3QNE4 1664 aa37.9■■■■□ 3.66
Apoe-206ENSMUST00000174064 Crybg2B7ZCC2 1516 aa37.87■■■■□ 3.65
Apoe-206ENSMUST00000174064 Pds5bQ4VA53 1446 aaKnown RBP37.84■■■■□ 3.65
Apoe-206ENSMUST00000174064 Thoc2B1AZI6 1594 aaKnown RBP37.61■■■■□ 3.61
Apoe-206ENSMUST00000174064 Zcchc6Q5BLK4 1491 aaKnown RBP37.61■■■■□ 3.61
Apoe-206ENSMUST00000174064 Atad2bE9Q166 1460 aaKnown RBP37.45■■■■□ 3.59
Apoe-206ENSMUST00000174064 Smarca4Q3TKT4 1613 aaKnown RBP37.07■■■■□ 3.52
Apoe-206ENSMUST00000174064 Ercc6F8VPZ5 1481 aa37.06■■■■□ 3.52
Apoe-206ENSMUST00000174064 Cc2d2aQ8CFW7 1633 aa37.05■■■■□ 3.52
Apoe-206ENSMUST00000174064 Smarca2Q6DIC0 1577 aa37.03■■■■□ 3.52
Apoe-206ENSMUST00000174064 Cecr2E9Q2Z1 1453 aa36.98■■■■□ 3.51
Apoe-206ENSMUST00000174064 Iqgap2Q3UQ44 1575 aa36.91■■■■□ 3.5
Apoe-206ENSMUST00000174064 Fam135aQ6NS59 1506 aa36.71■■■■□ 3.47
Apoe-206ENSMUST00000174064 Wdr62Q3U3T8 1523 aa36.62■■■■□ 3.45
Apoe-206ENSMUST00000174064 Frmpd1A2AKB4 1549 aa36.59■■■■□ 3.45
Apoe-206ENSMUST00000174064 Phldb1Q6PDH0 1371 aaKnown RBP36.42■■■■□ 3.42
Apoe-206ENSMUST00000174064 Ubl4bQ9CQ84 188 aa36.17■■■■□ 3.38
Apoe-206ENSMUST00000174064 Baz1bQ9Z277 1479 aa36.15■■■■□ 3.38
Apoe-206ENSMUST00000174064 Rtl1Q7M732 1744 aa36.12■■■■□ 3.37
Apoe-206ENSMUST00000174064 Unc13aQ4KUS2 1712 aa36.09■■■■□ 3.37
Apoe-206ENSMUST00000174064 CftrP26361 1476 aa36.04■■■■□ 3.36
Apoe-206ENSMUST00000174064 Cttnbp2B9EJA2 1648 aa35.98■■■■□ 3.35
Apoe-206ENSMUST00000174064 Synj1Q8CHC4 1574 aa35.98■■■■□ 3.35
Apoe-206ENSMUST00000174064 Mrc2Q64449 1479 aa35.87■■■■□ 3.33
Apoe-206ENSMUST00000174064 Brd4Q9ESU6 1400 aaKnown RBP35.86■■■■□ 3.33
Apoe-206ENSMUST00000174064 Ccdc136Q3TVA9 1136 aa35.84■■■■□ 3.33
Apoe-206ENSMUST00000174064 Esf1Q3V1V3 845 aaKnown RBP35.47■■■■□ 3.27
Apoe-206ENSMUST00000174064 Cux2P70298 1426 aa35.26■■■■□ 3.24
Apoe-206ENSMUST00000174064 Rsf1E9PWW9 1441 aaKnown RBP35.26■■■■□ 3.23
Apoe-206ENSMUST00000174064 Kif15Q6P9L6 1387 aa35.25■■■■□ 3.23
Apoe-206ENSMUST00000174064 Trim41Q5NCC3 630 aa35.16■■■■□ 3.22
Apoe-206ENSMUST00000174064 Lrriq1Q0P5X1 1673 aa35.13■■■■□ 3.21
Apoe-206ENSMUST00000174064 Kif21aQ9QXL2 1672 aa35.03■■■■□ 3.2
Apoe-206ENSMUST00000174064 Lamc3Q9R0B6 1581 aa35.01■■■■□ 3.2
Apoe-206ENSMUST00000174064 Npm1Q61937 292 aaKnown RBP34.89■■■■□ 3.18
Apoe-206ENSMUST00000174064 Dnajc5P60904 198 aa34.77■■■■□ 3.16
Apoe-206ENSMUST00000174064 Cep164Q5DU05 1446 aa34.71■■■■□ 3.15
Apoe-206ENSMUST00000174064 Eif4g3Q80XI3 1579 aaKnown RBP34.59■■■■□ 3.13
Apoe-206ENSMUST00000174064 Il27Q8K3I6 234 aa34.58■■■■□ 3.13
Apoe-206ENSMUST00000174064 TnnQ80Z71 1560 aa34.56■■■■□ 3.12
Apoe-206ENSMUST00000174064 Golga3P55937 1487 aa34.55■■■■□ 3.12
Apoe-206ENSMUST00000174064 Top2bQ64511 1612 aa34.53■■■■□ 3.12
Apoe-206ENSMUST00000174064 Cngb1E1AZ71 1325 aa34.52■■■■□ 3.12
Apoe-206ENSMUST00000174064 Ccdc18Q640L5 1455 aa34.51■■■■□ 3.11
Apoe-206ENSMUST00000174064 Dhx29Q6PGC1 1365 aaKnown RBP34.5■■■■□ 3.11
Apoe-206ENSMUST00000174064 Urb2E9Q7L1 1524 aaKnown RBP34.49■■■■□ 3.11
Apoe-206ENSMUST00000174064 Plb1Q3TTY0 1478 aa34.44■■■■□ 3.1
Apoe-206ENSMUST00000174064 LrpprcQ6PB66 1392 aaKnown RBP34.39■■■■□ 3.1
Apoe-206ENSMUST00000174064 Camsap1A2AHC3 1581 aa34.38■■■■□ 3.09
Apoe-206ENSMUST00000174064 Crocc2F6XLV1 1638 aa34.31■■■■□ 3.08
Apoe-206ENSMUST00000174064 Shroom2A2ALU4 1481 aa34.27■■■■□ 3.08
Apoe-206ENSMUST00000174064 Fmn1Q05860 1466 aa34.19■■■■□ 3.06
Apoe-206ENSMUST00000174064 PogzQ8BZH4 1409 aaKnown RBP34.16■■■■□ 3.06
Apoe-206ENSMUST00000174064 Ift140E9PY46 1464 aa34.07■■■■□ 3.04
Apoe-206ENSMUST00000174064 Duox2A2AQ99 1517 aa34.01■■■■□ 3.03
Apoe-206ENSMUST00000174064 Rusc2Q80U22 1514 aa34■■■■□ 3.03
Apoe-206ENSMUST00000174064 Pabpn1Q8CCS6 302 aaKnown RBP33.96■■■■□ 3.03
Apoe-206ENSMUST00000174064 Grin2bQ01097 1482 aa33.9■■■■□ 3.02
Apoe-206ENSMUST00000174064 Col17a1Q07563 1470 aa33.88■■■■□ 3.01
Apoe-206ENSMUST00000174064 Disp1Q3TDN0 1521 aa33.83■■■■□ 3.01
Apoe-206ENSMUST00000174064 Pelp1Q9DBD5 1123 aaKnown RBP33.8■■■■□ 3
Apoe-206ENSMUST00000174064 Samd9lQ69Z37 1561 aa33.75■■■□□ 2.99
Apoe-206ENSMUST00000174064 Setd1bQ8CFT2 1985 aa33.67■■■□□ 2.98
Apoe-206ENSMUST00000174064 Efcab5A0JP43 1406 aa33.66■■■□□ 2.98
Apoe-206ENSMUST00000174064 Nup160Q9Z0W3 1402 aaKnown RBP33.66■■■□□ 2.98
Apoe-206ENSMUST00000174064 Ccdc88bQ4QRL3 1481 aa33.63■■■□□ 2.97
Apoe-206ENSMUST00000174064 Pbrm1Q8BSQ9 1634 aaKnown RBP33.61■■■□□ 2.97
Apoe-206ENSMUST00000174064 Cc2d2bA0A286YDU8 1405 aa33.61■■■□□ 2.97
Apoe-206ENSMUST00000174064 Rad54l2Q99NG0 1466 aa33.57■■■□□ 2.97
Apoe-206ENSMUST00000174064 Top2aQ01320 1528 aaKnown RBP33.49■■■□□ 2.95
Apoe-206ENSMUST00000174064 Grin2aP35436 1464 aa33.45■■■□□ 2.95
Apoe-206ENSMUST00000174064 NrkQ9R0G8 1455 aa33.44■■■□□ 2.94
Apoe-206ENSMUST00000174064 Zcchc11B2RX14 1644 aaKnown RBP33.44■■■□□ 2.94
Apoe-206ENSMUST00000174064 Magi3Q9EQJ9 1476 aa33.43■■■□□ 2.94
Apoe-206ENSMUST00000174064 Chic1Q8CBW7 227 aa33.4■■■□□ 2.94
Apoe-206ENSMUST00000174064 AqrQ8CFQ3 1481 aaKnown RBP33.39■■■□□ 2.94
Apoe-206ENSMUST00000174064 PtprkP35822 1457 aa33.34■■■□□ 2.93
Apoe-206ENSMUST00000174064 Fgd6Q69ZL1 1399 aa33.31■■■□□ 2.92
Apoe-206ENSMUST00000174064 Shroom4Q1W617 1475 aa33.3■■■□□ 2.92
Apoe-206ENSMUST00000174064 Pla2r1Q62028 1487 aa33.23■■■□□ 2.91
Apoe-206ENSMUST00000174064 SynmQ70IV5 1561 aa33.2■■■□□ 2.9
Apoe-206ENSMUST00000174064 Adgrl3Q80TS3 1537 aa33.16■■■□□ 2.9
Apoe-206ENSMUST00000174064 AknaQ80VW7 1404 aa33.13■■■□□ 2.89
Apoe-206ENSMUST00000174064 Gapvd1Q6PAR5 1458 aa33.13■■■□□ 2.89
Apoe-206ENSMUST00000174064 Zeb1Q64318 1117 aa33.12■■■□□ 2.89
Apoe-206ENSMUST00000174064 Cep170Q6A065 1588 aa33.12■■■□□ 2.89
Retrieved 100 of 22,080 RNA–protein pairs in 13.9 ms