RNA–Protein interactions for RNA: ENSMUST00000172809.1

Gps1-207, Transcript of COP9 signalosome complex subunit 1, mousemouse

TSL 1 (best) BASIC

Gene Gps1, Length 2,000 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gps1-207ENSMUST00000172809 Gm35339A0A140LHH9 1649 aa34.66■■■■□ 3.14
Gps1-207ENSMUST00000172809 NischQ80TM9 1593 aa34.6■■■■□ 3.13
Gps1-207ENSMUST00000172809 Abcc9P70170 1546 aa33.61■■■□□ 2.97
Gps1-207ENSMUST00000172809 Abcc8B2RUS7 1588 aa33.17■■■□□ 2.9
Gps1-207ENSMUST00000172809 ScribQ80U72 1612 aa31.39■■■□□ 2.62
Gps1-207ENSMUST00000172809 Dcaf1Q80TR8 1506 aa30.88■■■□□ 2.53
Gps1-207ENSMUST00000172809 Rhox8Q6VSS7 320 aa30.8■■■□□ 2.52
Gps1-207ENSMUST00000172809 Kdm5dQ62240 1548 aa30.58■■■□□ 2.49
Gps1-207ENSMUST00000172809 NacadQ5SWP3 1504 aa30.53■■■□□ 2.48
Gps1-207ENSMUST00000172809 Rb1cc1Q9ESK9 1588 aa30.24■■■□□ 2.43
Gps1-207ENSMUST00000172809 Ccdc180J3QNE4 1664 aa30.07■■■□□ 2.4
Gps1-207ENSMUST00000172809 Baz1aO88379 1555 aa29.9■■■□□ 2.38
Gps1-207ENSMUST00000172809 Sycp2Q9CUU3 1500 aa29.88■■■□□ 2.37
Gps1-207ENSMUST00000172809 Rtl1Q7M732 1744 aa29.8■■■□□ 2.36
Gps1-207ENSMUST00000172809 Crybg2B7ZCC2 1516 aa29.67■■■□□ 2.34
Gps1-207ENSMUST00000172809 BicraF8VPZ9 1578 aa29.32■■■□□ 2.28
Gps1-207ENSMUST00000172809 Zcchc6Q5BLK4 1491 aaKnown RBP29.23■■■□□ 2.27
Gps1-207ENSMUST00000172809 Smarca2Q6DIC0 1577 aa29.14■■■□□ 2.26
Gps1-207ENSMUST00000172809 Ccdc136Q3TVA9 1136 aa28.67■■■□□ 2.18
Gps1-207ENSMUST00000172809 Cecr2E9Q2Z1 1453 aa28.6■■■□□ 2.17
Gps1-207ENSMUST00000172809 Smarca4Q3TKT4 1613 aaKnown RBP28.38■■■□□ 2.13
Gps1-207ENSMUST00000172809 Brd4Q9ESU6 1400 aaKnown RBP28.36■■■□□ 2.13
Gps1-207ENSMUST00000172809 Trim41Q5NCC3 630 aa28.33■■■□□ 2.13
Gps1-207ENSMUST00000172809 Pds5bQ4VA53 1446 aaKnown RBP28.25■■■□□ 2.11
Gps1-207ENSMUST00000172809 Atad2bE9Q166 1460 aaKnown RBP28.21■■■□□ 2.11
Gps1-207ENSMUST00000172809 Synj1Q8CHC4 1574 aa28.19■■■□□ 2.1
Gps1-207ENSMUST00000172809 CftrP26361 1476 aa28.17■■■□□ 2.1
Gps1-207ENSMUST00000172809 Cttnbp2B9EJA2 1648 aa28.09■■■□□ 2.09
Gps1-207ENSMUST00000172809 Iqgap2Q3UQ44 1575 aa28.07■■■□□ 2.08
Gps1-207ENSMUST00000172809 HrcG5E8J6 738 aa27.74■■■□□ 2.03
Gps1-207ENSMUST00000172809 Golga3P55937 1487 aa27.72■■■□□ 2.03
Gps1-207ENSMUST00000172809 Wdr62Q3U3T8 1523 aa27.69■■■□□ 2.02
Gps1-207ENSMUST00000172809 Ercc6F8VPZ5 1481 aa27.66■■■□□ 2.02
Gps1-207ENSMUST00000172809 Thoc2B1AZI6 1594 aaKnown RBP27.65■■■□□ 2.02
Gps1-207ENSMUST00000172809 Frmpd1A2AKB4 1549 aa27.65■■■□□ 2.02
Gps1-207ENSMUST00000172809 Esf1Q3V1V3 845 aaKnown RBP27.65■■■□□ 2.02
Gps1-207ENSMUST00000172809 Top2bQ64511 1612 aa27.6■■■□□ 2.01
Gps1-207ENSMUST00000172809 Cngb1E1AZ71 1325 aa27.51■■□□□ 1.99
Gps1-207ENSMUST00000172809 Unc13aQ4KUS2 1712 aa27.33■■□□□ 1.97
Gps1-207ENSMUST00000172809 Rsf1E9PWW9 1441 aaKnown RBP27.28■■□□□ 1.96
Gps1-207ENSMUST00000172809 Cc2d2aQ8CFW7 1633 aa27.26■■□□□ 1.95
Gps1-207ENSMUST00000172809 Cep164Q5DU05 1446 aa27.26■■□□□ 1.95
Gps1-207ENSMUST00000172809 Phldb1Q6PDH0 1371 aaKnown RBP27.25■■□□□ 1.95
Gps1-207ENSMUST00000172809 Ccdc88bQ4QRL3 1481 aa27.24■■□□□ 1.95
Gps1-207ENSMUST00000172809 Fam135aQ6NS59 1506 aa27.24■■□□□ 1.95
Gps1-207ENSMUST00000172809 Fmn1Q05860 1466 aa27.21■■□□□ 1.95
Gps1-207ENSMUST00000172809 Chic1Q8CBW7 227 aa27.15■■□□□ 1.94
Gps1-207ENSMUST00000172809 TnnQ80Z71 1560 aa27.12■■□□□ 1.93
Gps1-207ENSMUST00000172809 Lamc3Q9R0B6 1581 aa27.11■■□□□ 1.93
Gps1-207ENSMUST00000172809 Baz1bQ9Z277 1479 aa26.97■■□□□ 1.91
Gps1-207ENSMUST00000172809 Dnajc5bQ9CQ94 199 aa26.97■■□□□ 1.91
Gps1-207ENSMUST00000172809 Kif15Q6P9L6 1387 aa26.96■■□□□ 1.91
Gps1-207ENSMUST00000172809 Ubl4bQ9CQ84 188 aa26.91■■□□□ 1.9
Gps1-207ENSMUST00000172809 Top2aQ01320 1528 aaKnown RBP26.91■■□□□ 1.9
Gps1-207ENSMUST00000172809 Cux2P70298 1426 aa26.73■■□□□ 1.87
Gps1-207ENSMUST00000172809 Camsap1A2AHC3 1581 aa26.72■■□□□ 1.87
Gps1-207ENSMUST00000172809 Ccdc18Q640L5 1455 aa26.67■■□□□ 1.86
Gps1-207ENSMUST00000172809 Gab3Q8BSM5 595 aa26.6■■□□□ 1.85
Gps1-207ENSMUST00000172809 Mrc2Q64449 1479 aa26.58■■□□□ 1.85
Gps1-207ENSMUST00000172809 Rapgef2Q8CHG7 1496 aa26.52■■□□□ 1.84
Gps1-207ENSMUST00000172809 Il27Q8K3I6 234 aa26.49■■□□□ 1.83
Gps1-207ENSMUST00000172809 Npm1Q61937 292 aaKnown RBP26.49■■□□□ 1.83
Gps1-207ENSMUST00000172809 Grin2bQ01097 1482 aa26.46■■□□□ 1.83
Gps1-207ENSMUST00000172809 NrkQ9R0G8 1455 aa26.45■■□□□ 1.82
Gps1-207ENSMUST00000172809 Rpgrip1Q9EPQ2 1331 aa26.42■■□□□ 1.82
Gps1-207ENSMUST00000172809 LrpprcQ6PB66 1392 aaKnown RBP26.4■■□□□ 1.82
Gps1-207ENSMUST00000172809 Shroom4Q1W617 1475 aa26.34■■□□□ 1.81
Gps1-207ENSMUST00000172809 PtprkP35822 1457 aa26.34■■□□□ 1.81
Gps1-207ENSMUST00000172809 PogzQ8BZH4 1409 aaKnown RBP26.31■■□□□ 1.8
Gps1-207ENSMUST00000172809 Kif21aQ9QXL2 1672 aa26.3■■□□□ 1.8
Gps1-207ENSMUST00000172809 Cep162Q6ZQ06 1403 aa26.29■■□□□ 1.8
Gps1-207ENSMUST00000172809 Eif4g1Q6NZJ6 1600 aaKnown RBP26.28■■□□□ 1.8
Gps1-207ENSMUST00000172809 Efcab5A0JP43 1406 aa26.25■■□□□ 1.79
Gps1-207ENSMUST00000172809 Dhx29Q6PGC1 1365 aaKnown RBP26.24■■□□□ 1.79
Gps1-207ENSMUST00000172809 Duox2A2AQ99 1517 aa26.22■■□□□ 1.79
Gps1-207ENSMUST00000172809 Npm2Q80W85 207 aa26.22■■□□□ 1.79
Gps1-207ENSMUST00000172809 Crocc2F6XLV1 1638 aa26.14■■□□□ 1.77
Gps1-207ENSMUST00000172809 Arhgap35Q91YM2 1499 aa26.14■■□□□ 1.77
Gps1-207ENSMUST00000172809 Map3k1P53349 1493 aa26.09■■□□□ 1.77
Gps1-207ENSMUST00000172809 Mroh2bQ7M6Y6 1581 aa26.06■■□□□ 1.76
Gps1-207ENSMUST00000172809 Samd9lQ69Z37 1561 aa26.03■■□□□ 1.76
Gps1-207ENSMUST00000172809 Plb1Q3TTY0 1478 aa25.95■■□□□ 1.74
Gps1-207ENSMUST00000172809 Urb2E9Q7L1 1524 aaKnown RBP25.94■■□□□ 1.74
Gps1-207ENSMUST00000172809 Myt1lP97500 1187 aa25.93■■□□□ 1.74
Gps1-207ENSMUST00000172809 Lrriq1Q0P5X1 1673 aa25.93■■□□□ 1.74
Gps1-207ENSMUST00000172809 AqrQ8CFQ3 1481 aaKnown RBP25.92■■□□□ 1.74
Gps1-207ENSMUST00000172809 SynmQ70IV5 1561 aa25.91■■□□□ 1.74
Gps1-207ENSMUST00000172809 Acin1Q9JIX8 1338 aaKnown RBP25.89■■□□□ 1.73
Gps1-207ENSMUST00000172809 Zeb1Q64318 1117 aa25.87■■□□□ 1.73
Gps1-207ENSMUST00000172809 Clip1Q922J3 1391 aa25.86■■□□□ 1.73
Gps1-207ENSMUST00000172809 Rad54l2Q99NG0 1466 aa25.81■■□□□ 1.72
Gps1-207ENSMUST00000172809 Carmil1Q6EDY6 1374 aa25.81■■□□□ 1.72
Gps1-207ENSMUST00000172809 Ift140E9PY46 1464 aa25.8■■□□□ 1.72
Gps1-207ENSMUST00000172809 Disp1Q3TDN0 1521 aa25.78■■□□□ 1.72
Gps1-207ENSMUST00000172809 Ehmt2Q9Z148 1263 aaKnown RBP25.76■■□□□ 1.71
Gps1-207ENSMUST00000172809 Magi3Q9EQJ9 1476 aa25.74■■□□□ 1.71
Gps1-207ENSMUST00000172809 Pbrm1Q8BSQ9 1634 aaKnown RBP25.71■■□□□ 1.71
Gps1-207ENSMUST00000172809 Grin2aP35436 1464 aa25.7■■□□□ 1.7
Gps1-207ENSMUST00000172809 Pla2r1Q62028 1487 aa25.7■■□□□ 1.7
Gps1-207ENSMUST00000172809 Gpatch8A2A6A1 1505 aa25.68■■□□□ 1.7
Retrieved 100 of 22,080 RNA–protein pairs in 96.9 ms