RNA–Protein interactions for RNA: ENSMUST00000172756.1

Efr3a-203, Transcript of Protein EFR3 homolog A, mousemouse

TSL 1 (best) BASIC

Gene Efr3a, Length 1,411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Efr3a-203ENSMUST00000172756 Gm35339A0A140LHH9 1649 aa47.3■■■■■ 5.16
Efr3a-203ENSMUST00000172756 NischQ80TM9 1593 aa46.69■■■■■ 5.06
Efr3a-203ENSMUST00000172756 Abcc8B2RUS7 1588 aa45.18■■■■■ 4.82
Efr3a-203ENSMUST00000172756 Abcc9P70170 1546 aa45.15■■■■■ 4.82
Efr3a-203ENSMUST00000172756 ScribQ80U72 1612 aa43.55■■■■■ 4.56
Efr3a-203ENSMUST00000172756 NacadQ5SWP3 1504 aa42.27■■■■■ 4.36
Efr3a-203ENSMUST00000172756 Kdm5dQ62240 1548 aa42.13■■■■■ 4.33
Efr3a-203ENSMUST00000172756 Dcaf1Q80TR8 1506 aa41.58■■■■■ 4.25
Efr3a-203ENSMUST00000172756 Sycp2Q9CUU3 1500 aa41.43■■■■■ 4.22
Efr3a-203ENSMUST00000172756 BicraF8VPZ9 1578 aa40.82■■■■■ 4.13
Efr3a-203ENSMUST00000172756 Rb1cc1Q9ESK9 1588 aa40.66■■■■■ 4.1
Efr3a-203ENSMUST00000172756 Rhox8Q6VSS7 320 aa40.29■■■■■ 4.04
Efr3a-203ENSMUST00000172756 Baz1aO88379 1555 aa40.11■■■■■ 4.01
Efr3a-203ENSMUST00000172756 Crybg2B7ZCC2 1516 aa40.04■■■■■ 4
Efr3a-203ENSMUST00000172756 Ccdc180J3QNE4 1664 aa40.04■■■■■ 4
Efr3a-203ENSMUST00000172756 Dnajc5bQ9CQ94 199 aa39.87■■■■□ 3.97
Efr3a-203ENSMUST00000172756 Pds5bQ4VA53 1446 aaKnown RBP39.8■■■■□ 3.96
Efr3a-203ENSMUST00000172756 Zcchc6Q5BLK4 1491 aaKnown RBP39.54■■■■□ 3.92
Efr3a-203ENSMUST00000172756 Thoc2B1AZI6 1594 aaKnown RBP39.4■■■■□ 3.9
Efr3a-203ENSMUST00000172756 Atad2bE9Q166 1460 aaKnown RBP39.39■■■■□ 3.9
Efr3a-203ENSMUST00000172756 Smarca4Q3TKT4 1613 aaKnown RBP38.97■■■■□ 3.83
Efr3a-203ENSMUST00000172756 Ercc6F8VPZ5 1481 aa38.92■■■■□ 3.82
Efr3a-203ENSMUST00000172756 Smarca2Q6DIC0 1577 aa38.9■■■■□ 3.82
Efr3a-203ENSMUST00000172756 Cecr2E9Q2Z1 1453 aa38.83■■■■□ 3.81
Efr3a-203ENSMUST00000172756 Cc2d2aQ8CFW7 1633 aa38.77■■■■□ 3.8
Efr3a-203ENSMUST00000172756 Iqgap2Q3UQ44 1575 aa38.77■■■■□ 3.8
Efr3a-203ENSMUST00000172756 Fam135aQ6NS59 1506 aa38.53■■■■□ 3.76
Efr3a-203ENSMUST00000172756 Wdr62Q3U3T8 1523 aa38.46■■■■□ 3.75
Efr3a-203ENSMUST00000172756 Frmpd1A2AKB4 1549 aa38.43■■■■□ 3.74
Efr3a-203ENSMUST00000172756 Phldb1Q6PDH0 1371 aaKnown RBP38.31■■■■□ 3.72
Efr3a-203ENSMUST00000172756 Baz1bQ9Z277 1479 aa38.18■■■■□ 3.7
Efr3a-203ENSMUST00000172756 Rtl1Q7M732 1744 aa38.08■■■■□ 3.69
Efr3a-203ENSMUST00000172756 CftrP26361 1476 aa37.97■■■■□ 3.67
Efr3a-203ENSMUST00000172756 Ubl4bQ9CQ84 188 aa37.95■■■■□ 3.67
Efr3a-203ENSMUST00000172756 Brd4Q9ESU6 1400 aaKnown RBP37.88■■■■□ 3.65
Efr3a-203ENSMUST00000172756 Cttnbp2B9EJA2 1648 aa37.87■■■■□ 3.65
Efr3a-203ENSMUST00000172756 Synj1Q8CHC4 1574 aa37.82■■■■□ 3.65
Efr3a-203ENSMUST00000172756 Unc13aQ4KUS2 1712 aa37.75■■■■□ 3.63
Efr3a-203ENSMUST00000172756 Ccdc136Q3TVA9 1136 aa37.72■■■■□ 3.63
Efr3a-203ENSMUST00000172756 Mrc2Q64449 1479 aa37.65■■■■□ 3.62
Efr3a-203ENSMUST00000172756 Esf1Q3V1V3 845 aaKnown RBP37.34■■■■□ 3.57
Efr3a-203ENSMUST00000172756 Trim41Q5NCC3 630 aa37.22■■■■□ 3.55
Efr3a-203ENSMUST00000172756 Rsf1E9PWW9 1441 aaKnown RBP37.14■■■■□ 3.54
Efr3a-203ENSMUST00000172756 Cux2P70298 1426 aa37.06■■■■□ 3.52
Efr3a-203ENSMUST00000172756 Kif15Q6P9L6 1387 aa37.05■■■■□ 3.52
Efr3a-203ENSMUST00000172756 Lamc3Q9R0B6 1581 aa36.87■■■■□ 3.49
Efr3a-203ENSMUST00000172756 Lrriq1Q0P5X1 1673 aa36.75■■■■□ 3.47
Efr3a-203ENSMUST00000172756 Npm1Q61937 292 aaKnown RBP36.7■■■■□ 3.47
Efr3a-203ENSMUST00000172756 Kif21aQ9QXL2 1672 aa36.68■■■■□ 3.46
Efr3a-203ENSMUST00000172756 Cep164Q5DU05 1446 aa36.55■■■■□ 3.44
Efr3a-203ENSMUST00000172756 Golga3P55937 1487 aa36.49■■■■□ 3.43
Efr3a-203ENSMUST00000172756 Top2bQ64511 1612 aa36.39■■■■□ 3.42
Efr3a-203ENSMUST00000172756 TnnQ80Z71 1560 aa36.39■■■■□ 3.42
Efr3a-203ENSMUST00000172756 Ccdc18Q640L5 1455 aa36.37■■■■□ 3.41
Efr3a-203ENSMUST00000172756 Cngb1E1AZ71 1325 aa36.32■■■■□ 3.41
Efr3a-203ENSMUST00000172756 Dhx29Q6PGC1 1365 aaKnown RBP36.27■■■■□ 3.4
Efr3a-203ENSMUST00000172756 Il27Q8K3I6 234 aa36.27■■■■□ 3.4
Efr3a-203ENSMUST00000172756 Eif4g3Q80XI3 1579 aaKnown RBP36.26■■■■□ 3.4
Efr3a-203ENSMUST00000172756 Dnajc5P60904 198 aa36.25■■■■□ 3.39
Efr3a-203ENSMUST00000172756 LrpprcQ6PB66 1392 aaKnown RBP36.22■■■■□ 3.39
Efr3a-203ENSMUST00000172756 Urb2E9Q7L1 1524 aaKnown RBP36.18■■■■□ 3.38
Efr3a-203ENSMUST00000172756 Camsap1A2AHC3 1581 aa36.17■■■■□ 3.38
Efr3a-203ENSMUST00000172756 Plb1Q3TTY0 1478 aa36.14■■■■□ 3.38
Efr3a-203ENSMUST00000172756 Fmn1Q05860 1466 aa36.1■■■■□ 3.37
Efr3a-203ENSMUST00000172756 Crocc2F6XLV1 1638 aa36.03■■■■□ 3.36
Efr3a-203ENSMUST00000172756 PogzQ8BZH4 1409 aaKnown RBP35.98■■■■□ 3.35
Efr3a-203ENSMUST00000172756 Shroom2A2ALU4 1481 aa35.93■■■■□ 3.34
Efr3a-203ENSMUST00000172756 Ift140E9PY46 1464 aa35.85■■■■□ 3.33
Efr3a-203ENSMUST00000172756 Duox2A2AQ99 1517 aa35.79■■■■□ 3.32
Efr3a-203ENSMUST00000172756 Grin2bQ01097 1482 aa35.71■■■■□ 3.31
Efr3a-203ENSMUST00000172756 Rusc2Q80U22 1514 aa35.68■■■■□ 3.3
Efr3a-203ENSMUST00000172756 Pabpn1Q8CCS6 302 aaKnown RBP35.6■■■■□ 3.29
Efr3a-203ENSMUST00000172756 Disp1Q3TDN0 1521 aa35.56■■■■□ 3.28
Efr3a-203ENSMUST00000172756 Efcab5A0JP43 1406 aa35.54■■■■□ 3.28
Efr3a-203ENSMUST00000172756 Ccdc88bQ4QRL3 1481 aa35.45■■■■□ 3.26
Efr3a-203ENSMUST00000172756 Samd9lQ69Z37 1561 aa35.44■■■■□ 3.26
Efr3a-203ENSMUST00000172756 Col17a1Q07563 1470 aa35.42■■■■□ 3.26
Efr3a-203ENSMUST00000172756 Nup160Q9Z0W3 1402 aaKnown RBP35.42■■■■□ 3.26
Efr3a-203ENSMUST00000172756 Cc2d2bA0A286YDU8 1405 aa35.4■■■■□ 3.26
Efr3a-203ENSMUST00000172756 Pbrm1Q8BSQ9 1634 aaKnown RBP35.37■■■■□ 3.25
Efr3a-203ENSMUST00000172756 Top2aQ01320 1528 aaKnown RBP35.34■■■■□ 3.25
Efr3a-203ENSMUST00000172756 Pelp1Q9DBD5 1123 aaKnown RBP35.33■■■■□ 3.25
Efr3a-203ENSMUST00000172756 NrkQ9R0G8 1455 aa35.32■■■■□ 3.24
Efr3a-203ENSMUST00000172756 Rad54l2Q99NG0 1466 aa35.24■■■■□ 3.23
Efr3a-203ENSMUST00000172756 Chic1Q8CBW7 227 aa35.21■■■■□ 3.23
Efr3a-203ENSMUST00000172756 Setd1bQ8CFT2 1985 aa35.2■■■■□ 3.23
Efr3a-203ENSMUST00000172756 Grin2aP35436 1464 aa35.18■■■■□ 3.22
Efr3a-203ENSMUST00000172756 Magi3Q9EQJ9 1476 aa35.15■■■■□ 3.22
Efr3a-203ENSMUST00000172756 Shroom4Q1W617 1475 aa35.12■■■■□ 3.21
Efr3a-203ENSMUST00000172756 AqrQ8CFQ3 1481 aaKnown RBP35.11■■■■□ 3.21
Efr3a-203ENSMUST00000172756 Zcchc11B2RX14 1644 aaKnown RBP35.09■■■■□ 3.21
Efr3a-203ENSMUST00000172756 PtprkP35822 1457 aa35.07■■■■□ 3.21
Efr3a-203ENSMUST00000172756 Fgd6Q69ZL1 1399 aa35.04■■■■□ 3.2
Efr3a-203ENSMUST00000172756 SynmQ70IV5 1561 aa34.96■■■■□ 3.19
Efr3a-203ENSMUST00000172756 Pla2r1Q62028 1487 aa34.94■■■■□ 3.18
Efr3a-203ENSMUST00000172756 Gpatch8A2A6A1 1505 aa34.92■■■■□ 3.18
Efr3a-203ENSMUST00000172756 Zeb1Q64318 1117 aa34.85■■■■□ 3.17
Efr3a-203ENSMUST00000172756 AknaQ80VW7 1404 aa34.74■■■■□ 3.15
Efr3a-203ENSMUST00000172756 Gapvd1Q6PAR5 1458 aa34.73■■■■□ 3.15
Efr3a-203ENSMUST00000172756 Adgrl3Q80TS3 1537 aa34.73■■■■□ 3.15
Retrieved 100 of 22,080 RNA–protein pairs in 14.9 ms