RNA–Protein interactions for RNA: ENSMUST00000170731.7

Rtn4-210, Transcript of Reticulon-4, mousemouse

TSL 1 (best) BASIC

Gene Rtn4, Length 1,272 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4-210ENSMUST00000170731 Gm35339A0A140LHH9 1649 aa46,28■■■■■ 5
Rtn4-210ENSMUST00000170731 NischQ80TM9 1593 aa45,42■■■■■ 4,86
Rtn4-210ENSMUST00000170731 Abcc8B2RUS7 1588 aa44,03■■■■■ 4,64
Rtn4-210ENSMUST00000170731 Abcc9P70170 1546 aa43,97■■■■■ 4,63
Rtn4-210ENSMUST00000170731 ScribQ80U72 1612 aa42,68■■■■■ 4,42
Rtn4-210ENSMUST00000170731 NacadQ5SWP3 1504 aa41,23■■■■■ 4,19
Rtn4-210ENSMUST00000170731 Kdm5dQ62240 1548 aa41,14■■■■■ 4,18
Rtn4-210ENSMUST00000170731 Dcaf1Q80TR8 1506 aa40,47■■■■■ 4,07
Rtn4-210ENSMUST00000170731 Sycp2Q9CUU3 1500 aa40,45■■■■■ 4,07
Rtn4-210ENSMUST00000170731 BicraF8VPZ9 1578 aa39,97■■■■□ 3,99
Rtn4-210ENSMUST00000170731 Rb1cc1Q9ESK9 1588 aa39,57■■■■□ 3,92
Rtn4-210ENSMUST00000170731 Dnajc5bQ9CQ94 199 aa39,17■■■■□ 3,86
Rtn4-210ENSMUST00000170731 Ccdc180J3QNE4 1664 aa39,04■■■■□ 3,84
Rtn4-210ENSMUST00000170731 Baz1aO88379 1555 aa38,99■■■■□ 3,83
Rtn4-210ENSMUST00000170731 Crybg2B7ZCC2 1516 aa38,92■■■■□ 3,82
Rtn4-210ENSMUST00000170731 Pds5bQ4VA53 1446 aaKnown RBP38,83■■■■□ 3,81
Rtn4-210ENSMUST00000170731 Rhox8Q6VSS7 320 aa38,72■■■■□ 3,79
Rtn4-210ENSMUST00000170731 Thoc2B1AZI6 1594 aaKnown RBP38,71■■■■□ 3,79
Rtn4-210ENSMUST00000170731 Atad2bE9Q166 1460 aaKnown RBP38,42■■■■□ 3,74
Rtn4-210ENSMUST00000170731 Zcchc6Q5BLK4 1491 aaKnown RBP38,38■■■■□ 3,73
Rtn4-210ENSMUST00000170731 Smarca4Q3TKT4 1613 aaKnown RBP38,02■■■■□ 3,68
Rtn4-210ENSMUST00000170731 Cc2d2aQ8CFW7 1633 aa38,02■■■■□ 3,68
Rtn4-210ENSMUST00000170731 Smarca2Q6DIC0 1577 aa37,98■■■■□ 3,67
Rtn4-210ENSMUST00000170731 Ercc6F8VPZ5 1481 aa37,98■■■■□ 3,67
Rtn4-210ENSMUST00000170731 Iqgap2Q3UQ44 1575 aa37,86■■■■□ 3,65
Rtn4-210ENSMUST00000170731 Cecr2E9Q2Z1 1453 aa37,79■■■■□ 3,64
Rtn4-210ENSMUST00000170731 Fam135aQ6NS59 1506 aa37,76■■■■□ 3,63
Rtn4-210ENSMUST00000170731 Wdr62Q3U3T8 1523 aa37,6■■■■□ 3,61
Rtn4-210ENSMUST00000170731 Frmpd1A2AKB4 1549 aa37,51■■■■□ 3,6
Rtn4-210ENSMUST00000170731 Baz1bQ9Z277 1479 aa37,33■■■■□ 3,57
Rtn4-210ENSMUST00000170731 Phldb1Q6PDH0 1371 aaKnown RBP37,33■■■■□ 3,57
Rtn4-210ENSMUST00000170731 Unc13aQ4KUS2 1712 aa37,09■■■■□ 3,53
Rtn4-210ENSMUST00000170731 Rtl1Q7M732 1744 aa37,01■■■■□ 3,51
Rtn4-210ENSMUST00000170731 Ubl4bQ9CQ84 188 aa36,91■■■■□ 3,5
Rtn4-210ENSMUST00000170731 CftrP26361 1476 aa36,9■■■■□ 3,5
Rtn4-210ENSMUST00000170731 Cttnbp2B9EJA2 1648 aa36,9■■■■□ 3,5
Rtn4-210ENSMUST00000170731 Mrc2Q64449 1479 aa36,81■■■■□ 3,48
Rtn4-210ENSMUST00000170731 Synj1Q8CHC4 1574 aa36,8■■■■□ 3,48
Rtn4-210ENSMUST00000170731 Brd4Q9ESU6 1400 aaKnown RBP36,68■■■■□ 3,46
Rtn4-210ENSMUST00000170731 Ccdc136Q3TVA9 1136 aa36,32■■■■□ 3,4
Rtn4-210ENSMUST00000170731 Lrriq1Q0P5X1 1673 aa36,08■■■■□ 3,37
Rtn4-210ENSMUST00000170731 Cux2P70298 1426 aa36,07■■■■□ 3,36
Rtn4-210ENSMUST00000170731 Rsf1E9PWW9 1441 aaKnown RBP36,06■■■■□ 3,36
Rtn4-210ENSMUST00000170731 Esf1Q3V1V3 845 aaKnown RBP36,03■■■■□ 3,36
Rtn4-210ENSMUST00000170731 Kif15Q6P9L6 1387 aa36■■■■□ 3,35
Rtn4-210ENSMUST00000170731 Kif21aQ9QXL2 1672 aa35,94■■■■□ 3,34
Rtn4-210ENSMUST00000170731 Lamc3Q9R0B6 1581 aa35,93■■■■□ 3,34
Rtn4-210ENSMUST00000170731 Trim41Q5NCC3 630 aa35,78■■■■□ 3,32
Rtn4-210ENSMUST00000170731 Dnajc5P60904 198 aa35,73■■■■□ 3,31
Rtn4-210ENSMUST00000170731 Eif4g3Q80XI3 1579 aaKnown RBP35,57■■■■□ 3,28
Rtn4-210ENSMUST00000170731 Npm1Q61937 292 aaKnown RBP35,57■■■■□ 3,28
Rtn4-210ENSMUST00000170731 Cep164Q5DU05 1446 aa35,51■■■■□ 3,28
Rtn4-210ENSMUST00000170731 TnnQ80Z71 1560 aa35,47■■■■□ 3,27
Rtn4-210ENSMUST00000170731 Top2bQ64511 1612 aa35,39■■■■□ 3,26
Rtn4-210ENSMUST00000170731 Urb2E9Q7L1 1524 aaKnown RBP35,33■■■■□ 3,25
Rtn4-210ENSMUST00000170731 Ccdc18Q640L5 1455 aa35,31■■■■□ 3,24
Rtn4-210ENSMUST00000170731 Golga3P55937 1487 aa35,29■■■■□ 3,24
Rtn4-210ENSMUST00000170731 Dhx29Q6PGC1 1365 aaKnown RBP35,29■■■■□ 3,24
Rtn4-210ENSMUST00000170731 Shroom2A2ALU4 1481 aa35,29■■■■□ 3,24
Rtn4-210ENSMUST00000170731 Camsap1A2AHC3 1581 aa35,24■■■■□ 3,23
Rtn4-210ENSMUST00000170731 Plb1Q3TTY0 1478 aa35,23■■■■□ 3,23
Rtn4-210ENSMUST00000170731 LrpprcQ6PB66 1392 aaKnown RBP35,19■■■■□ 3,22
Rtn4-210ENSMUST00000170731 Crocc2F6XLV1 1638 aa35,17■■■■□ 3,22
Rtn4-210ENSMUST00000170731 Il27Q8K3I6 234 aa35,11■■■■□ 3,21
Rtn4-210ENSMUST00000170731 Cngb1E1AZ71 1325 aa34,99■■■■□ 3,19
Rtn4-210ENSMUST00000170731 PogzQ8BZH4 1409 aaKnown RBP34,98■■■■□ 3,19
Rtn4-210ENSMUST00000170731 Fmn1Q05860 1466 aa34,97■■■■□ 3,19
Rtn4-210ENSMUST00000170731 Ift140E9PY46 1464 aa34,93■■■■□ 3,18
Rtn4-210ENSMUST00000170731 Rusc2Q80U22 1514 aa34,91■■■■□ 3,18
Rtn4-210ENSMUST00000170731 Col17a1Q07563 1470 aa34,82■■■■□ 3,16
Rtn4-210ENSMUST00000170731 Duox2A2AQ99 1517 aa34,8■■■■□ 3,16
Rtn4-210ENSMUST00000170731 Pabpn1Q8CCS6 302 aaKnown RBP34,73■■■■□ 3,15
Rtn4-210ENSMUST00000170731 Grin2bQ01097 1482 aa34,71■■■■□ 3,15
Rtn4-210ENSMUST00000170731 Disp1Q3TDN0 1521 aa34,65■■■■□ 3,14
Rtn4-210ENSMUST00000170731 Setd1bQ8CFT2 1985 aa34,59■■■■□ 3,13
Rtn4-210ENSMUST00000170731 Samd9lQ69Z37 1561 aa34,58■■■■□ 3,13
Rtn4-210ENSMUST00000170731 Pbrm1Q8BSQ9 1634 aaKnown RBP34,57■■■■□ 3,12
Rtn4-210ENSMUST00000170731 Nup160Q9Z0W3 1402 aaKnown RBP34,53■■■■□ 3,12
Rtn4-210ENSMUST00000170731 Efcab5A0JP43 1406 aa34,47■■■■□ 3,11
Rtn4-210ENSMUST00000170731 Zcchc11B2RX14 1644 aaKnown RBP34,46■■■■□ 3,11
Rtn4-210ENSMUST00000170731 Cc2d2bA0A286YDU8 1405 aa34,46■■■■□ 3,11
Rtn4-210ENSMUST00000170731 Pelp1Q9DBD5 1123 aaKnown RBP34,43■■■■□ 3,1
Rtn4-210ENSMUST00000170731 Ccdc88bQ4QRL3 1481 aa34,27■■■■□ 3,08
Rtn4-210ENSMUST00000170731 Top2aQ01320 1528 aaKnown RBP34,27■■■■□ 3,08
Rtn4-210ENSMUST00000170731 Rad54l2Q99NG0 1466 aa34,27■■■■□ 3,08
Rtn4-210ENSMUST00000170731 Magi3Q9EQJ9 1476 aa34,27■■■■□ 3,08
Rtn4-210ENSMUST00000170731 Grin2aP35436 1464 aa34,26■■■■□ 3,07
Rtn4-210ENSMUST00000170731 NrkQ9R0G8 1455 aa34,25■■■■□ 3,07
Rtn4-210ENSMUST00000170731 AqrQ8CFQ3 1481 aaKnown RBP34,22■■■■□ 3,07
Rtn4-210ENSMUST00000170731 Gpatch8A2A6A1 1505 aa34,14■■■■□ 3,06
Rtn4-210ENSMUST00000170731 Fgd6Q69ZL1 1399 aa34,11■■■■□ 3,05
Rtn4-210ENSMUST00000170731 Shroom4Q1W617 1475 aa34,07■■■■□ 3,04
Rtn4-210ENSMUST00000170731 PtprkP35822 1457 aa34,03■■■■□ 3,04
Rtn4-210ENSMUST00000170731 Pla2r1Q62028 1487 aa34,01■■■■□ 3,04
Rtn4-210ENSMUST00000170731 Adgrl3Q80TS3 1537 aa34■■■■□ 3,03
Rtn4-210ENSMUST00000170731 SynmQ70IV5 1561 aa34■■■■□ 3,03
Rtn4-210ENSMUST00000170731 Cep170Q6A065 1588 aa33,98■■■■□ 3,03
Rtn4-210ENSMUST00000170731 Gapvd1Q6PAR5 1458 aa33,95■■■■□ 3,02
Rtn4-210ENSMUST00000170731 Chic1Q8CBW7 227 aa33,9■■■■□ 3,02
Rtn4-210ENSMUST00000170731 Arhgef5E9Q7D5 1581 aa33,87■■■■□ 3,01
Retrieved 100 of 22,080 RNA–protein pairs in 22,9 ms