RNA–Protein interactions for RNA: ENSMUST00000160486.7

Usf1-207, Transcript of Upstream stimulatory factor 1, mousemouse

TSL 2 BASIC

Gene Usf1, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1-207ENSMUST00000160486 Gm35339A0A140LHH9 1649 aa27.86■■■□□ 2.05
Usf1-207ENSMUST00000160486 NischQ80TM9 1593 aa27.79■■■□□ 2.04
Usf1-207ENSMUST00000160486 Abcc9P70170 1546 aa26.99■■□□□ 1.91
Usf1-207ENSMUST00000160486 Abcc8B2RUS7 1588 aa26.63■■□□□ 1.85
Usf1-207ENSMUST00000160486 ScribQ80U72 1612 aa25.24■■□□□ 1.63
Usf1-207ENSMUST00000160486 Dcaf1Q80TR8 1506 aa24.78■■□□□ 1.56
Usf1-207ENSMUST00000160486 Rhox8Q6VSS7 320 aa24.76■■□□□ 1.55
Usf1-207ENSMUST00000160486 Kdm5dQ62240 1548 aa24.58■■□□□ 1.53
Usf1-207ENSMUST00000160486 NacadQ5SWP3 1504 aa24.54■■□□□ 1.52
Usf1-207ENSMUST00000160486 Rb1cc1Q9ESK9 1588 aa24.31■■□□□ 1.48
Usf1-207ENSMUST00000160486 Ccdc180J3QNE4 1664 aa24.17■■□□□ 1.46
Usf1-207ENSMUST00000160486 Baz1aO88379 1555 aa24.02■■□□□ 1.44
Usf1-207ENSMUST00000160486 Sycp2Q9CUU3 1500 aa24.01■■□□□ 1.43
Usf1-207ENSMUST00000160486 Rtl1Q7M732 1744 aa23.94■■□□□ 1.42
Usf1-207ENSMUST00000160486 Crybg2B7ZCC2 1516 aa23.79■■□□□ 1.4
Usf1-207ENSMUST00000160486 BicraF8VPZ9 1578 aa23.55■■□□□ 1.36
Usf1-207ENSMUST00000160486 Zcchc6Q5BLK4 1491 aaKnown RBP23.5■■□□□ 1.35
Usf1-207ENSMUST00000160486 Smarca2Q6DIC0 1577 aa23.4■■□□□ 1.34
Usf1-207ENSMUST00000160486 Ccdc136Q3TVA9 1136 aa23■■□□□ 1.27
Usf1-207ENSMUST00000160486 Cecr2E9Q2Z1 1453 aa22.94■■□□□ 1.26
Usf1-207ENSMUST00000160486 Smarca4Q3TKT4 1613 aaKnown RBP22.82■■□□□ 1.24
Usf1-207ENSMUST00000160486 Brd4Q9ESU6 1400 aaKnown RBP22.77■■□□□ 1.24
Usf1-207ENSMUST00000160486 Trim41Q5NCC3 630 aa22.73■■□□□ 1.23
Usf1-207ENSMUST00000160486 Pds5bQ4VA53 1446 aaKnown RBP22.73■■□□□ 1.23
Usf1-207ENSMUST00000160486 Atad2bE9Q166 1460 aaKnown RBP22.67■■□□□ 1.22
Usf1-207ENSMUST00000160486 Synj1Q8CHC4 1574 aa22.64■■□□□ 1.21
Usf1-207ENSMUST00000160486 Cttnbp2B9EJA2 1648 aa22.6■■□□□ 1.21
Usf1-207ENSMUST00000160486 CftrP26361 1476 aa22.59■■□□□ 1.21
Usf1-207ENSMUST00000160486 Iqgap2Q3UQ44 1575 aa22.59■■□□□ 1.21
Usf1-207ENSMUST00000160486 Ercc6F8VPZ5 1481 aa22.3■■□□□ 1.16
Usf1-207ENSMUST00000160486 Thoc2B1AZI6 1594 aaKnown RBP22.27■■□□□ 1.16
Usf1-207ENSMUST00000160486 Wdr62Q3U3T8 1523 aa22.27■■□□□ 1.16
Usf1-207ENSMUST00000160486 Golga3P55937 1487 aa22.24■■□□□ 1.15
Usf1-207ENSMUST00000160486 Esf1Q3V1V3 845 aaKnown RBP22.23■■□□□ 1.15
Usf1-207ENSMUST00000160486 HrcG5E8J6 738 aa22.22■■□□□ 1.15
Usf1-207ENSMUST00000160486 Frmpd1A2AKB4 1549 aa22.21■■□□□ 1.15
Usf1-207ENSMUST00000160486 Top2bQ64511 1612 aa22.15■■□□□ 1.14
Usf1-207ENSMUST00000160486 Cngb1E1AZ71 1325 aa22.12■■□□□ 1.13
Usf1-207ENSMUST00000160486 Unc13aQ4KUS2 1712 aa21.99■■□□□ 1.11
Usf1-207ENSMUST00000160486 Cc2d2aQ8CFW7 1633 aa21.94■■□□□ 1.1
Usf1-207ENSMUST00000160486 Fam135aQ6NS59 1506 aa21.93■■□□□ 1.1
Usf1-207ENSMUST00000160486 Phldb1Q6PDH0 1371 aaKnown RBP21.9■■□□□ 1.1
Usf1-207ENSMUST00000160486 Dnajc5bQ9CQ94 199 aa21.9■■□□□ 1.1
Usf1-207ENSMUST00000160486 Fmn1Q05860 1466 aa21.85■■□□□ 1.09
Usf1-207ENSMUST00000160486 Rsf1E9PWW9 1441 aaKnown RBP21.84■■□□□ 1.09
Usf1-207ENSMUST00000160486 Cep164Q5DU05 1446 aa21.84■■□□□ 1.09
Usf1-207ENSMUST00000160486 Ccdc88bQ4QRL3 1481 aa21.82■■□□□ 1.08
Usf1-207ENSMUST00000160486 TnnQ80Z71 1560 aa21.78■■□□□ 1.08
Usf1-207ENSMUST00000160486 Lamc3Q9R0B6 1581 aa21.78■■□□□ 1.08
Usf1-207ENSMUST00000160486 Chic1Q8CBW7 227 aa21.71■■□□□ 1.07
Usf1-207ENSMUST00000160486 Baz1bQ9Z277 1479 aa21.71■■□□□ 1.07
Usf1-207ENSMUST00000160486 Kif15Q6P9L6 1387 aa21.67■■□□□ 1.06
Usf1-207ENSMUST00000160486 Rpgrip1Q9EPQ2 1331 aa21.65■■□□□ 1.06
Usf1-207ENSMUST00000160486 Ubl4bQ9CQ84 188 aa21.62■■□□□ 1.05
Usf1-207ENSMUST00000160486 Top2aQ01320 1528 aaKnown RBP21.6■■□□□ 1.05
Usf1-207ENSMUST00000160486 Camsap1A2AHC3 1581 aa21.49■■□□□ 1.03
Usf1-207ENSMUST00000160486 Cux2P70298 1426 aa21.48■■□□□ 1.03
Usf1-207ENSMUST00000160486 Ccdc18Q640L5 1455 aa21.45■■□□□ 1.03
Usf1-207ENSMUST00000160486 Mrc2Q64449 1479 aa21.41■■□□□ 1.02
Usf1-207ENSMUST00000160486 Gab3Q8BSM5 595 aa21.39■■□□□ 1.02
Usf1-207ENSMUST00000160486 Il27Q8K3I6 234 aa21.3■■□□□ 1
Usf1-207ENSMUST00000160486 Npm1Q61937 292 aaKnown RBP21.29■■□□□ 1
Usf1-207ENSMUST00000160486 Grin2bQ01097 1482 aa21.25■□□□□ 0.99
Usf1-207ENSMUST00000160486 Rapgef2Q8CHG7 1496 aa21.25■□□□□ 0.99
Usf1-207ENSMUST00000160486 NrkQ9R0G8 1455 aa21.21■□□□□ 0.99
Usf1-207ENSMUST00000160486 LrpprcQ6PB66 1392 aaKnown RBP21.19■□□□□ 0.98
Usf1-207ENSMUST00000160486 Kif21aQ9QXL2 1672 aa21.19■□□□□ 0.98
Usf1-207ENSMUST00000160486 Shroom4Q1W617 1475 aa21.15■□□□□ 0.98
Usf1-207ENSMUST00000160486 PogzQ8BZH4 1409 aaKnown RBP21.14■□□□□ 0.97
Usf1-207ENSMUST00000160486 Npm2Q80W85 207 aa21.11■□□□□ 0.97
Usf1-207ENSMUST00000160486 PtprkP35822 1457 aa21.1■□□□□ 0.97
Usf1-207ENSMUST00000160486 Dhx29Q6PGC1 1365 aaKnown RBP21.09■□□□□ 0.97
Usf1-207ENSMUST00000160486 Eif4g1Q6NZJ6 1600 aaKnown RBP21.06■□□□□ 0.96
Usf1-207ENSMUST00000160486 Cep162Q6ZQ06 1403 aa21.06■□□□□ 0.96
Usf1-207ENSMUST00000160486 Duox2A2AQ99 1517 aa21.06■□□□□ 0.96
Usf1-207ENSMUST00000160486 Efcab5A0JP43 1406 aa21.05■□□□□ 0.96
Usf1-207ENSMUST00000160486 Crocc2F6XLV1 1638 aa21.04■□□□□ 0.96
Usf1-207ENSMUST00000160486 Acin1Q9JIX8 1338 aaKnown RBP21.01■□□□□ 0.95
Usf1-207ENSMUST00000160486 Arhgap35Q91YM2 1499 aa20.95■□□□□ 0.94
Usf1-207ENSMUST00000160486 Map3k1P53349 1493 aa20.94■□□□□ 0.94
Usf1-207ENSMUST00000160486 Samd9lQ69Z37 1561 aa20.93■□□□□ 0.94
Usf1-207ENSMUST00000160486 Lrriq1Q0P5X1 1673 aa20.91■□□□□ 0.94
Usf1-207ENSMUST00000160486 Mroh2bQ7M6Y6 1581 aa20.9■□□□□ 0.94
Usf1-207ENSMUST00000160486 Myt1lP97500 1187 aa20.87■□□□□ 0.93
Usf1-207ENSMUST00000160486 Plb1Q3TTY0 1478 aa20.86■□□□□ 0.93
Usf1-207ENSMUST00000160486 Urb2E9Q7L1 1524 aaKnown RBP20.85■□□□□ 0.93
Usf1-207ENSMUST00000160486 Zeb1Q64318 1117 aa20.84■□□□□ 0.93
Usf1-207ENSMUST00000160486 SynmQ70IV5 1561 aa20.82■□□□□ 0.92
Usf1-207ENSMUST00000160486 AqrQ8CFQ3 1481 aaKnown RBP20.81■□□□□ 0.92
Usf1-207ENSMUST00000160486 Ehmt2Q9Z148 1263 aaKnown RBP20.75■□□□□ 0.91
Usf1-207ENSMUST00000160486 Ift140E9PY46 1464 aa20.75■□□□□ 0.91
Usf1-207ENSMUST00000160486 Clip1Q922J3 1391 aa20.74■□□□□ 0.91
Usf1-207ENSMUST00000160486 Rad54l2Q99NG0 1466 aa20.73■□□□□ 0.91
Usf1-207ENSMUST00000160486 Pbrm1Q8BSQ9 1634 aaKnown RBP20.72■□□□□ 0.91
Usf1-207ENSMUST00000160486 Carmil1Q6EDY6 1374 aa20.71■□□□□ 0.91
Usf1-207ENSMUST00000160486 Disp1Q3TDN0 1521 aa20.69■□□□□ 0.9
Usf1-207ENSMUST00000160486 Magi3Q9EQJ9 1476 aa20.68■□□□□ 0.9
Usf1-207ENSMUST00000160486 Grin2aP35436 1464 aa20.66■□□□□ 0.9
Usf1-207ENSMUST00000160486 Pla2r1Q62028 1487 aa20.64■□□□□ 0.9
Usf1-207ENSMUST00000160486 Gpatch8A2A6A1 1505 aa20.64■□□□□ 0.89
Retrieved 100 of 22,080 RNA–protein pairs in 92.2 ms