RNA–Protein interactions for RNA: ENSMUST00000129256.1

Vps53-204, Transcript of Vacuolar protein sorting-associated protein 53 homolog, mousemouse

TSL 1 (best) BASIC

Gene Vps53, Length 650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53-204ENSMUST00000129256 Gm35339A0A140LHH9 1649 aa33.83■■■■□ 3.01
Vps53-204ENSMUST00000129256 NischQ80TM9 1593 aa33.15■■■□□ 2.9
Vps53-204ENSMUST00000129256 Abcc9P70170 1546 aa32.58■■■□□ 2.81
Vps53-204ENSMUST00000129256 Abcc8B2RUS7 1588 aa32.27■■■□□ 2.76
Vps53-204ENSMUST00000129256 ScribQ80U72 1612 aa31.67■■■□□ 2.66
Vps53-204ENSMUST00000129256 NacadQ5SWP3 1504 aa30.42■■■□□ 2.46
Vps53-204ENSMUST00000129256 Kdm5dQ62240 1548 aa30.4■■■□□ 2.46
Vps53-204ENSMUST00000129256 Dnajc5bQ9CQ94 199 aa30.25■■■□□ 2.43
Vps53-204ENSMUST00000129256 Sycp2Q9CUU3 1500 aa29.9■■■□□ 2.38
Vps53-204ENSMUST00000129256 BicraF8VPZ9 1578 aa29.71■■■□□ 2.35
Vps53-204ENSMUST00000129256 Dcaf1Q80TR8 1506 aa29.41■■■□□ 2.3
Vps53-204ENSMUST00000129256 Thoc2B1AZI6 1594 aaKnown RBP29.01■■■□□ 2.23
Vps53-204ENSMUST00000129256 Pds5bQ4VA53 1446 aaKnown RBP28.87■■■□□ 2.21
Vps53-204ENSMUST00000129256 Rb1cc1Q9ESK9 1588 aa28.86■■■□□ 2.21
Vps53-204ENSMUST00000129256 Cc2d2aQ8CFW7 1633 aa28.58■■■□□ 2.17
Vps53-204ENSMUST00000129256 Atad2bE9Q166 1460 aaKnown RBP28.46■■■□□ 2.15
Vps53-204ENSMUST00000129256 Baz1aO88379 1555 aa28.32■■■□□ 2.12
Vps53-204ENSMUST00000129256 Ercc6F8VPZ5 1481 aa28.29■■■□□ 2.12
Vps53-204ENSMUST00000129256 Zcchc6Q5BLK4 1491 aaKnown RBP28.17■■■□□ 2.1
Vps53-204ENSMUST00000129256 Crybg2B7ZCC2 1516 aa28.15■■■□□ 2.1
Vps53-204ENSMUST00000129256 Fam135aQ6NS59 1506 aa28.15■■■□□ 2.1
Vps53-204ENSMUST00000129256 Smarca2Q6DIC0 1577 aa28.12■■■□□ 2.09
Vps53-204ENSMUST00000129256 Rhox8Q6VSS7 320 aa28.06■■■□□ 2.08
Vps53-204ENSMUST00000129256 Ccdc180J3QNE4 1664 aa28.02■■■□□ 2.08
Vps53-204ENSMUST00000129256 Smarca4Q3TKT4 1613 aaKnown RBP27.97■■■□□ 2.07
Vps53-204ENSMUST00000129256 Iqgap2Q3UQ44 1575 aa27.97■■■□□ 2.07
Vps53-204ENSMUST00000129256 Dnajc5P60904 198 aa27.94■■■□□ 2.06
Vps53-204ENSMUST00000129256 Frmpd1A2AKB4 1549 aa27.83■■■□□ 2.05
Vps53-204ENSMUST00000129256 Cecr2E9Q2Z1 1453 aa27.83■■■□□ 2.04
Vps53-204ENSMUST00000129256 Wdr62Q3U3T8 1523 aa27.82■■■□□ 2.04
Vps53-204ENSMUST00000129256 Phldb1Q6PDH0 1371 aaKnown RBP27.77■■■□□ 2.04
Vps53-204ENSMUST00000129256 Trim41Q5NCC3 630 aa27.77■■■□□ 2.04
Vps53-204ENSMUST00000129256 Ubl4bQ9CQ84 188 aa27.69■■■□□ 2.02
Vps53-204ENSMUST00000129256 Unc13aQ4KUS2 1712 aa27.52■■■□□ 2
Vps53-204ENSMUST00000129256 Mrc2Q64449 1479 aa27.51■■■□□ 2
Vps53-204ENSMUST00000129256 Baz1bQ9Z277 1479 aa27.49■■□□□ 1.99
Vps53-204ENSMUST00000129256 Lrriq1Q0P5X1 1673 aa27.07■■□□□ 1.92
Vps53-204ENSMUST00000129256 CftrP26361 1476 aa26.92■■□□□ 1.9
Vps53-204ENSMUST00000129256 Cttnbp2B9EJA2 1648 aa26.87■■□□□ 1.89
Vps53-204ENSMUST00000129256 Synj1Q8CHC4 1574 aa26.86■■□□□ 1.89
Vps53-204ENSMUST00000129256 Rsf1E9PWW9 1441 aaKnown RBP26.82■■□□□ 1.88
Vps53-204ENSMUST00000129256 Kif21aQ9QXL2 1672 aa26.78■■□□□ 1.88
Vps53-204ENSMUST00000129256 Cux2P70298 1426 aa26.75■■□□□ 1.87
Vps53-204ENSMUST00000129256 Shroom2A2ALU4 1481 aa26.63■■□□□ 1.85
Vps53-204ENSMUST00000129256 Kif15Q6P9L6 1387 aa26.6■■□□□ 1.85
Vps53-204ENSMUST00000129256 Eif4g3Q80XI3 1579 aaKnown RBP26.58■■□□□ 1.85
Vps53-204ENSMUST00000129256 Brd4Q9ESU6 1400 aaKnown RBP26.54■■□□□ 1.84
Vps53-204ENSMUST00000129256 Col17a1Q07563 1470 aa26.53■■□□□ 1.84
Vps53-204ENSMUST00000129256 Esf1Q3V1V3 845 aaKnown RBP26.49■■□□□ 1.83
Vps53-204ENSMUST00000129256 Ccdc136Q3TVA9 1136 aa26.46■■□□□ 1.83
Vps53-204ENSMUST00000129256 Npm1Q61937 292 aaKnown RBP26.4■■□□□ 1.82
Vps53-204ENSMUST00000129256 Rtl1Q7M732 1744 aa26.32■■□□□ 1.8
Vps53-204ENSMUST00000129256 Pabpn1Q8CCS6 302 aaKnown RBP26.32■■□□□ 1.8
Vps53-204ENSMUST00000129256 Urb2E9Q7L1 1524 aaKnown RBP26.3■■□□□ 1.8
Vps53-204ENSMUST00000129256 Lamc3Q9R0B6 1581 aa26.28■■□□□ 1.8
Vps53-204ENSMUST00000129256 Top2bQ64511 1612 aa26.26■■□□□ 1.79
Vps53-204ENSMUST00000129256 Plb1Q3TTY0 1478 aa26.23■■□□□ 1.79
Vps53-204ENSMUST00000129256 Pelp1Q9DBD5 1123 aaKnown RBP26.22■■□□□ 1.79
Vps53-204ENSMUST00000129256 Cep164Q5DU05 1446 aa26.19■■□□□ 1.78
Vps53-204ENSMUST00000129256 Dhx29Q6PGC1 1365 aaKnown RBP26.13■■□□□ 1.77
Vps53-204ENSMUST00000129256 Il27Q8K3I6 234 aa26.13■■□□□ 1.77
Vps53-204ENSMUST00000129256 Pcdh10E9PXQ7 1057 aa26.01■■□□□ 1.75
Vps53-204ENSMUST00000129256 Crocc2F6XLV1 1638 aa25.97■■□□□ 1.75
Vps53-204ENSMUST00000129256 Rusc2Q80U22 1514 aa25.93■■□□□ 1.74
Vps53-204ENSMUST00000129256 Zcchc11B2RX14 1644 aaKnown RBP25.92■■□□□ 1.74
Vps53-204ENSMUST00000129256 LrpprcQ6PB66 1392 aaKnown RBP25.9■■□□□ 1.74
Vps53-204ENSMUST00000129256 Ccdc18Q640L5 1455 aa25.85■■□□□ 1.73
Vps53-204ENSMUST00000129256 Ift140E9PY46 1464 aa25.81■■□□□ 1.72
Vps53-204ENSMUST00000129256 Camsap1A2AHC3 1581 aa25.76■■□□□ 1.71
Vps53-204ENSMUST00000129256 TnnQ80Z71 1560 aa25.75■■□□□ 1.71
Vps53-204ENSMUST00000129256 Arhgef5E9Q7D5 1581 aa25.69■■□□□ 1.7
Vps53-204ENSMUST00000129256 Ttbk1Q6PCN3 1308 aa25.69■■□□□ 1.7
Vps53-204ENSMUST00000129256 PogzQ8BZH4 1409 aaKnown RBP25.69■■□□□ 1.7
Vps53-204ENSMUST00000129256 Adgrl3Q80TS3 1537 aa25.66■■□□□ 1.7
Vps53-204ENSMUST00000129256 Setd1bQ8CFT2 1985 aa25.62■■□□□ 1.69
Vps53-204ENSMUST00000129256 Disp1Q3TDN0 1521 aa25.61■■□□□ 1.69
Vps53-204ENSMUST00000129256 Duox2A2AQ99 1517 aa25.58■■□□□ 1.69
Vps53-204ENSMUST00000129256 PtprkP35822 1457 aa25.52■■□□□ 1.68
Vps53-204ENSMUST00000129256 Gm156Q58A37 223 aa25.51■■□□□ 1.67
Vps53-204ENSMUST00000129256 Cngb1E1AZ71 1325 aa25.51■■□□□ 1.67
Vps53-204ENSMUST00000129256 Cep170Q6A065 1588 aa25.51■■□□□ 1.67
Vps53-204ENSMUST00000129256 Golga3P55937 1487 aa25.46■■□□□ 1.67
Vps53-204ENSMUST00000129256 PtprtQ99M80 1454 aa25.46■■□□□ 1.67
Vps53-204ENSMUST00000129256 Nup160Q9Z0W3 1402 aaKnown RBP25.46■■□□□ 1.67
Vps53-204ENSMUST00000129256 Gapvd1Q6PAR5 1458 aa25.44■■□□□ 1.66
Vps53-204ENSMUST00000129256 Samd9lQ69Z37 1561 aa25.43■■□□□ 1.66
Vps53-204ENSMUST00000129256 Cc2d2bA0A286YDU8 1405 aa25.41■■□□□ 1.66
Vps53-204ENSMUST00000129256 Pbrm1Q8BSQ9 1634 aaKnown RBP25.35■■□□□ 1.65
Vps53-204ENSMUST00000129256 Rad54l2Q99NG0 1466 aa25.34■■□□□ 1.65
Vps53-204ENSMUST00000129256 Grin2bQ01097 1482 aa25.33■■□□□ 1.65
Vps53-204ENSMUST00000129256 Fgd6Q69ZL1 1399 aa25.31■■□□□ 1.64
Vps53-204ENSMUST00000129256 Pprc1Q6NZN1 1644 aa25.26■■□□□ 1.63
Vps53-204ENSMUST00000129256 AknaQ80VW7 1404 aa25.26■■□□□ 1.63
Vps53-204ENSMUST00000129256 AqrQ8CFQ3 1481 aaKnown RBP25.24■■□□□ 1.63
Vps53-204ENSMUST00000129256 Fmn1Q05860 1466 aa25.22■■□□□ 1.63
Vps53-204ENSMUST00000129256 Grin2aP35436 1464 aa25.21■■□□□ 1.63
Vps53-204ENSMUST00000129256 Magi3Q9EQJ9 1476 aa25.2■■□□□ 1.62
Vps53-204ENSMUST00000129256 Abcc1O35379 1528 aa25.19■■□□□ 1.62
Vps53-204ENSMUST00000129256 Ythdc2B2RR83 1445 aaKnown RBP25.17■■□□□ 1.62
Vps53-204ENSMUST00000129256 Rapgef2Q8CHG7 1496 aa25.14■■□□□ 1.61
Retrieved 100 of 22,080 RNA–protein pairs in 39.5 ms