RNA–Protein interactions for RNA: ENSMUST00000128788.7

Ift20-203, Transcript of Intraflagellar transport protein 20 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ift20, Length 1,141 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ift20-203ENSMUST00000128788 Gm35339A0A140LHH9 1649 aa31.35■■■□□ 2.61
Ift20-203ENSMUST00000128788 NischQ80TM9 1593 aa30.83■■■□□ 2.53
Ift20-203ENSMUST00000128788 Chic1Q8CBW7 227 aa30.06■■■□□ 2.4
Ift20-203ENSMUST00000128788 Abcc8B2RUS7 1588 aa29.9■■■□□ 2.38
Ift20-203ENSMUST00000128788 Abcc9P70170 1546 aa29.77■■■□□ 2.36
Ift20-203ENSMUST00000128788 Mapk8ip2Q9ERE9 830 aa29.32■■■□□ 2.28
Ift20-203ENSMUST00000128788 ScribQ80U72 1612 aa29.07■■■□□ 2.24
Ift20-203ENSMUST00000128788 NacadQ5SWP3 1504 aa28.04■■■□□ 2.08
Ift20-203ENSMUST00000128788 Kdm5dQ62240 1548 aa28.01■■■□□ 2.07
Ift20-203ENSMUST00000128788 Sycp2Q9CUU3 1500 aa27.52■■■□□ 2
Ift20-203ENSMUST00000128788 Dcaf1Q80TR8 1506 aa27.37■■□□□ 1.97
Ift20-203ENSMUST00000128788 BicraF8VPZ9 1578 aa27.24■■□□□ 1.95
Ift20-203ENSMUST00000128788 Phf23Q8BSN5 401 aa27.08■■□□□ 1.93
Ift20-203ENSMUST00000128788 Dnajc5bQ9CQ94 199 aa27.07■■□□□ 1.92
Ift20-203ENSMUST00000128788 Rb1cc1Q9ESK9 1588 aa26.85■■□□□ 1.89
Ift20-203ENSMUST00000128788 Pds5bQ4VA53 1446 aaKnown RBP26.48■■□□□ 1.83
Ift20-203ENSMUST00000128788 Thoc2B1AZI6 1594 aaKnown RBP26.41■■□□□ 1.82
Ift20-203ENSMUST00000128788 Baz1aO88379 1555 aa26.41■■□□□ 1.82
Ift20-203ENSMUST00000128788 Rhox8Q6VSS7 320 aa26.37■■□□□ 1.81
Ift20-203ENSMUST00000128788 Ccdc180J3QNE4 1664 aa26.29■■□□□ 1.8
Ift20-203ENSMUST00000128788 Crybg2B7ZCC2 1516 aa26.29■■□□□ 1.8
Ift20-203ENSMUST00000128788 Atad2bE9Q166 1460 aaKnown RBP26.17■■□□□ 1.78
Ift20-203ENSMUST00000128788 Plppr3Q7TPB0 716 aa26.14■■□□□ 1.78
Ift20-203ENSMUST00000128788 Zcchc6Q5BLK4 1491 aaKnown RBP26.14■■□□□ 1.78
Ift20-203ENSMUST00000128788 Cc2d2aQ8CFW7 1633 aa26.02■■□□□ 1.76
Ift20-203ENSMUST00000128788 Gab3Q8BSM5 595 aa25.94■■□□□ 1.74
Ift20-203ENSMUST00000128788 Ercc6F8VPZ5 1481 aa25.93■■□□□ 1.74
Ift20-203ENSMUST00000128788 Smarca2Q6DIC0 1577 aa25.87■■□□□ 1.73
Ift20-203ENSMUST00000128788 Smarca4Q3TKT4 1613 aaKnown RBP25.85■■□□□ 1.73
Ift20-203ENSMUST00000128788 Iqgap2Q3UQ44 1575 aa25.77■■□□□ 1.72
Ift20-203ENSMUST00000128788 Cecr2E9Q2Z1 1453 aa25.74■■□□□ 1.71
Ift20-203ENSMUST00000128788 Fam135aQ6NS59 1506 aa25.73■■□□□ 1.71
Ift20-203ENSMUST00000128788 Wdr62Q3U3T8 1523 aa25.59■■□□□ 1.69
Ift20-203ENSMUST00000128788 Frmpd1A2AKB4 1549 aa25.58■■□□□ 1.68
Ift20-203ENSMUST00000128788 Phldb1Q6PDH0 1371 aaKnown RBP25.47■■□□□ 1.67
Ift20-203ENSMUST00000128788 Ubl4bQ9CQ84 188 aa25.31■■□□□ 1.64
Ift20-203ENSMUST00000128788 Baz1bQ9Z277 1479 aa25.29■■□□□ 1.64
Ift20-203ENSMUST00000128788 Unc13aQ4KUS2 1712 aa25.27■■□□□ 1.64
Ift20-203ENSMUST00000128788 Mrc2Q64449 1479 aa25.14■■□□□ 1.61
Ift20-203ENSMUST00000128788 CftrP26361 1476 aa25.03■■□□□ 1.6
Ift20-203ENSMUST00000128788 Cttnbp2B9EJA2 1648 aa25.01■■□□□ 1.59
Ift20-203ENSMUST00000128788 Synj1Q8CHC4 1574 aa24.99■■□□□ 1.59
Ift20-203ENSMUST00000128788 Rtl1Q7M732 1744 aa24.93■■□□□ 1.58
Ift20-203ENSMUST00000128788 Brd4Q9ESU6 1400 aaKnown RBP24.84■■□□□ 1.57
Ift20-203ENSMUST00000128788 Senp3Q9EP97 568 aaKnown RBP24.83■■□□□ 1.57
Ift20-203ENSMUST00000128788 Trim41Q5NCC3 630 aa24.78■■□□□ 1.56
Ift20-203ENSMUST00000128788 Dnajc5P60904 198 aa24.77■■□□□ 1.56
Ift20-203ENSMUST00000128788 Ccdc136Q3TVA9 1136 aa24.77■■□□□ 1.56
Ift20-203ENSMUST00000128788 Lrriq1Q0P5X1 1673 aa24.66■■□□□ 1.54
Ift20-203ENSMUST00000128788 Esf1Q3V1V3 845 aaKnown RBP24.61■■□□□ 1.53
Ift20-203ENSMUST00000128788 Cux2P70298 1426 aa24.61■■□□□ 1.53
Ift20-203ENSMUST00000128788 Kif15Q6P9L6 1387 aa24.55■■□□□ 1.52
Ift20-203ENSMUST00000128788 Rsf1E9PWW9 1441 aaKnown RBP24.54■■□□□ 1.52
Ift20-203ENSMUST00000128788 Kif21aQ9QXL2 1672 aa24.53■■□□□ 1.52
Ift20-203ENSMUST00000128788 Lamc3Q9R0B6 1581 aa24.37■■□□□ 1.49
Ift20-203ENSMUST00000128788 Npm1Q61937 292 aaKnown RBP24.32■■□□□ 1.48
Ift20-203ENSMUST00000128788 Eif4g3Q80XI3 1579 aaKnown RBP24.27■■□□□ 1.48
Ift20-203ENSMUST00000128788 Cep164Q5DU05 1446 aa24.19■■□□□ 1.46
Ift20-203ENSMUST00000128788 Shroom2A2ALU4 1481 aa24.13■■□□□ 1.45
Ift20-203ENSMUST00000128788 Urb2E9Q7L1 1524 aaKnown RBP24.12■■□□□ 1.45
Ift20-203ENSMUST00000128788 Il27Q8K3I6 234 aa24.08■■□□□ 1.45
Ift20-203ENSMUST00000128788 Plb1Q3TTY0 1478 aa24.07■■□□□ 1.44
Ift20-203ENSMUST00000128788 Dhx29Q6PGC1 1365 aaKnown RBP24.06■■□□□ 1.44
Ift20-203ENSMUST00000128788 TnnQ80Z71 1560 aa24■■□□□ 1.43
Ift20-203ENSMUST00000128788 Ccdc18Q640L5 1455 aa24■■□□□ 1.43
Ift20-203ENSMUST00000128788 LrpprcQ6PB66 1392 aaKnown RBP23.95■■□□□ 1.42
Ift20-203ENSMUST00000128788 Crocc2F6XLV1 1638 aa23.95■■□□□ 1.42
Ift20-203ENSMUST00000128788 Camsap1A2AHC3 1581 aa23.92■■□□□ 1.42
Ift20-203ENSMUST00000128788 Top2bQ64511 1612 aa23.92■■□□□ 1.42
Ift20-203ENSMUST00000128788 Kcna4Q61423 654 aa23.91■■□□□ 1.42
Ift20-203ENSMUST00000128788 Col17a1Q07563 1470 aa23.9■■□□□ 1.42
Ift20-203ENSMUST00000128788 Golga3P55937 1487 aa23.87■■□□□ 1.41
Ift20-203ENSMUST00000128788 Pabpn1Q8CCS6 302 aaKnown RBP23.87■■□□□ 1.41
Ift20-203ENSMUST00000128788 Cngb1E1AZ71 1325 aa23.86■■□□□ 1.41
Ift20-203ENSMUST00000128788 Rusc2Q80U22 1514 aa23.79■■□□□ 1.4
Ift20-203ENSMUST00000128788 PogzQ8BZH4 1409 aaKnown RBP23.78■■□□□ 1.4
Ift20-203ENSMUST00000128788 Ift140E9PY46 1464 aa23.77■■□□□ 1.4
Ift20-203ENSMUST00000128788 Pelp1Q9DBD5 1123 aaKnown RBP23.74■■□□□ 1.39
Ift20-203ENSMUST00000128788 Duox2A2AQ99 1517 aa23.68■■□□□ 1.38
Ift20-203ENSMUST00000128788 Fmn1Q05860 1466 aa23.66■■□□□ 1.38
Ift20-203ENSMUST00000128788 Disp1Q3TDN0 1521 aa23.6■■□□□ 1.37
Ift20-203ENSMUST00000128788 Setd1bQ8CFT2 1985 aa23.56■■□□□ 1.36
Ift20-203ENSMUST00000128788 Grin2bQ01097 1482 aa23.56■■□□□ 1.36
Ift20-203ENSMUST00000128788 Zcchc11B2RX14 1644 aaKnown RBP23.53■■□□□ 1.36
Ift20-203ENSMUST00000128788 Samd9lQ69Z37 1561 aa23.52■■□□□ 1.36
Ift20-203ENSMUST00000128788 Nup160Q9Z0W3 1402 aaKnown RBP23.48■■□□□ 1.35
Ift20-203ENSMUST00000128788 Pbrm1Q8BSQ9 1634 aaKnown RBP23.45■■□□□ 1.34
Ift20-203ENSMUST00000128788 Cc2d2bA0A286YDU8 1405 aa23.44■■□□□ 1.34
Ift20-203ENSMUST00000128788 Rad54l2Q99NG0 1466 aa23.39■■□□□ 1.34
Ift20-203ENSMUST00000128788 Efcab5A0JP43 1406 aa23.38■■□□□ 1.33
Ift20-203ENSMUST00000128788 Grin2aP35436 1464 aa23.3■■□□□ 1.32
Ift20-203ENSMUST00000128788 Adgrl3Q80TS3 1537 aa23.3■■□□□ 1.32
Ift20-203ENSMUST00000128788 Magi3Q9EQJ9 1476 aa23.3■■□□□ 1.32
Ift20-203ENSMUST00000128788 AqrQ8CFQ3 1481 aaKnown RBP23.29■■□□□ 1.32
Ift20-203ENSMUST00000128788 Fgd6Q69ZL1 1399 aa23.27■■□□□ 1.31
Ift20-203ENSMUST00000128788 PtprkP35822 1457 aa23.25■■□□□ 1.31
Ift20-203ENSMUST00000128788 Pcdh10E9PXQ7 1057 aa23.25■■□□□ 1.31
Ift20-203ENSMUST00000128788 Cep170Q6A065 1588 aa23.24■■□□□ 1.31
Ift20-203ENSMUST00000128788 Arhgef5E9Q7D5 1581 aa23.23■■□□□ 1.31
Ift20-203ENSMUST00000128788 Ccdc88bQ4QRL3 1481 aa23.22■■□□□ 1.31
Retrieved 100 of 22,080 RNA–protein pairs in 12.2 ms