RNA–Protein interactions for RNA: ENSMUST00000118833.2

Med28-202, Transcript of Mediator of RNA polymerase II transcription subunit 28, mousemouse

TSL 2 BASIC

Gene Med28, Length 734 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Med28-202ENSMUST00000118833 Gm35339A0A140LHH9 1649 aa34.3■■■■□ 3.08
Med28-202ENSMUST00000118833 NischQ80TM9 1593 aa33.69■■■□□ 2.98
Med28-202ENSMUST00000118833 Abcc8B2RUS7 1588 aa32.66■■■□□ 2.82
Med28-202ENSMUST00000118833 Abcc9P70170 1546 aa32.61■■■□□ 2.81
Med28-202ENSMUST00000118833 ScribQ80U72 1612 aa31.72■■■□□ 2.67
Med28-202ENSMUST00000118833 Kdm5dQ62240 1548 aa30.55■■■□□ 2.48
Med28-202ENSMUST00000118833 NacadQ5SWP3 1504 aa30.54■■■□□ 2.48
Med28-202ENSMUST00000118833 Sycp2Q9CUU3 1500 aa29.99■■■□□ 2.39
Med28-202ENSMUST00000118833 Dcaf1Q80TR8 1506 aa29.96■■■□□ 2.39
Med28-202ENSMUST00000118833 BicraF8VPZ9 1578 aa29.69■■■□□ 2.34
Med28-202ENSMUST00000118833 Rb1cc1Q9ESK9 1588 aa29.37■■■□□ 2.29
Med28-202ENSMUST00000118833 Dnajc5bQ9CQ94 199 aa29.21■■■□□ 2.27
Med28-202ENSMUST00000118833 Baz1aO88379 1555 aa28.91■■■□□ 2.22
Med28-202ENSMUST00000118833 Ccdc180J3QNE4 1664 aa28.85■■■□□ 2.21
Med28-202ENSMUST00000118833 Rhox8Q6VSS7 320 aa28.8■■■□□ 2.2
Med28-202ENSMUST00000118833 Pds5bQ4VA53 1446 aaKnown RBP28.75■■■□□ 2.19
Med28-202ENSMUST00000118833 Crybg2B7ZCC2 1516 aa28.74■■■□□ 2.19
Med28-202ENSMUST00000118833 Thoc2B1AZI6 1594 aaKnown RBP28.71■■■□□ 2.19
Med28-202ENSMUST00000118833 Zcchc6Q5BLK4 1491 aaKnown RBP28.51■■■□□ 2.15
Med28-202ENSMUST00000118833 Atad2bE9Q166 1460 aaKnown RBP28.46■■■□□ 2.15
Med28-202ENSMUST00000118833 Cc2d2aQ8CFW7 1633 aa28.24■■■□□ 2.11
Med28-202ENSMUST00000118833 Smarca4Q3TKT4 1613 aaKnown RBP28.19■■■□□ 2.1
Med28-202ENSMUST00000118833 Smarca2Q6DIC0 1577 aa28.17■■■□□ 2.1
Med28-202ENSMUST00000118833 Ercc6F8VPZ5 1481 aa28.14■■■□□ 2.09
Med28-202ENSMUST00000118833 Cecr2E9Q2Z1 1453 aa28.11■■■□□ 2.09
Med28-202ENSMUST00000118833 Iqgap2Q3UQ44 1575 aa28.08■■■□□ 2.09
Med28-202ENSMUST00000118833 Fam135aQ6NS59 1506 aa27.98■■■□□ 2.07
Med28-202ENSMUST00000118833 Wdr62Q3U3T8 1523 aa27.88■■■□□ 2.05
Med28-202ENSMUST00000118833 Frmpd1A2AKB4 1549 aa27.84■■■□□ 2.05
Med28-202ENSMUST00000118833 Phldb1Q6PDH0 1371 aaKnown RBP27.64■■■□□ 2.02
Med28-202ENSMUST00000118833 Unc13aQ4KUS2 1712 aa27.59■■■□□ 2.01
Med28-202ENSMUST00000118833 Baz1bQ9Z277 1479 aa27.48■■□□□ 1.99
Med28-202ENSMUST00000118833 Rtl1Q7M732 1744 aa27.44■■□□□ 1.98
Med28-202ENSMUST00000118833 Ubl4bQ9CQ84 188 aa27.39■■□□□ 1.98
Med28-202ENSMUST00000118833 CftrP26361 1476 aa27.37■■□□□ 1.97
Med28-202ENSMUST00000118833 Cttnbp2B9EJA2 1648 aa27.36■■□□□ 1.97
Med28-202ENSMUST00000118833 Synj1Q8CHC4 1574 aa27.35■■□□□ 1.97
Med28-202ENSMUST00000118833 Mrc2Q64449 1479 aa27.28■■□□□ 1.96
Med28-202ENSMUST00000118833 Brd4Q9ESU6 1400 aaKnown RBP27.15■■□□□ 1.94
Med28-202ENSMUST00000118833 Ccdc136Q3TVA9 1136 aa27.04■■□□□ 1.92
Med28-202ENSMUST00000118833 Dnajc5P60904 198 aa26.98■■□□□ 1.91
Med28-202ENSMUST00000118833 Lrriq1Q0P5X1 1673 aa26.8■■□□□ 1.88
Med28-202ENSMUST00000118833 Cux2P70298 1426 aa26.76■■□□□ 1.87
Med28-202ENSMUST00000118833 Esf1Q3V1V3 845 aaKnown RBP26.75■■□□□ 1.87
Med28-202ENSMUST00000118833 Rsf1E9PWW9 1441 aaKnown RBP26.72■■□□□ 1.87
Med28-202ENSMUST00000118833 Kif15Q6P9L6 1387 aa26.71■■□□□ 1.87
Med28-202ENSMUST00000118833 Kif21aQ9QXL2 1672 aa26.71■■□□□ 1.87
Med28-202ENSMUST00000118833 Lamc3Q9R0B6 1581 aa26.63■■□□□ 1.85
Med28-202ENSMUST00000118833 Trim41Q5NCC3 630 aa26.62■■□□□ 1.85
Med28-202ENSMUST00000118833 Eif4g3Q80XI3 1579 aaKnown RBP26.37■■□□□ 1.81
Med28-202ENSMUST00000118833 Npm1Q61937 292 aaKnown RBP26.37■■□□□ 1.81
Med28-202ENSMUST00000118833 Cep164Q5DU05 1446 aa26.31■■□□□ 1.8
Med28-202ENSMUST00000118833 TnnQ80Z71 1560 aa26.3■■□□□ 1.8
Med28-202ENSMUST00000118833 Top2bQ64511 1612 aa26.26■■□□□ 1.79
Med28-202ENSMUST00000118833 Urb2E9Q7L1 1524 aaKnown RBP26.24■■□□□ 1.79
Med28-202ENSMUST00000118833 Dhx29Q6PGC1 1365 aaKnown RBP26.19■■□□□ 1.78
Med28-202ENSMUST00000118833 Golga3P55937 1487 aa26.17■■□□□ 1.78
Med28-202ENSMUST00000118833 Plb1Q3TTY0 1478 aa26.17■■□□□ 1.78
Med28-202ENSMUST00000118833 Camsap1A2AHC3 1581 aa26.15■■□□□ 1.78
Med28-202ENSMUST00000118833 Ccdc18Q640L5 1455 aa26.13■■□□□ 1.77
Med28-202ENSMUST00000118833 Il27Q8K3I6 234 aa26.13■■□□□ 1.77
Med28-202ENSMUST00000118833 Shroom2A2ALU4 1481 aa26.11■■□□□ 1.77
Med28-202ENSMUST00000118833 Crocc2F6XLV1 1638 aa26.09■■□□□ 1.77
Med28-202ENSMUST00000118833 LrpprcQ6PB66 1392 aaKnown RBP26.07■■□□□ 1.76
Med28-202ENSMUST00000118833 Cngb1E1AZ71 1325 aa26.03■■□□□ 1.76
Med28-202ENSMUST00000118833 PogzQ8BZH4 1409 aaKnown RBP25.93■■□□□ 1.74
Med28-202ENSMUST00000118833 Fmn1Q05860 1466 aa25.91■■□□□ 1.74
Med28-202ENSMUST00000118833 Rusc2Q80U22 1514 aa25.88■■□□□ 1.73
Med28-202ENSMUST00000118833 Ift140E9PY46 1464 aa25.86■■□□□ 1.73
Med28-202ENSMUST00000118833 Col17a1Q07563 1470 aa25.83■■□□□ 1.73
Med28-202ENSMUST00000118833 Duox2A2AQ99 1517 aa25.82■■□□□ 1.72
Med28-202ENSMUST00000118833 Pabpn1Q8CCS6 302 aaKnown RBP25.74■■□□□ 1.71
Med28-202ENSMUST00000118833 Setd1bQ8CFT2 1985 aa25.74■■□□□ 1.71
Med28-202ENSMUST00000118833 Grin2bQ01097 1482 aa25.73■■□□□ 1.71
Med28-202ENSMUST00000118833 Disp1Q3TDN0 1521 aa25.71■■□□□ 1.71
Med28-202ENSMUST00000118833 Samd9lQ69Z37 1561 aa25.69■■□□□ 1.7
Med28-202ENSMUST00000118833 Pelp1Q9DBD5 1123 aaKnown RBP25.6■■□□□ 1.69
Med28-202ENSMUST00000118833 Nup160Q9Z0W3 1402 aaKnown RBP25.59■■□□□ 1.69
Med28-202ENSMUST00000118833 Pbrm1Q8BSQ9 1634 aaKnown RBP25.59■■□□□ 1.69
Med28-202ENSMUST00000118833 Efcab5A0JP43 1406 aa25.51■■□□□ 1.67
Med28-202ENSMUST00000118833 Ccdc88bQ4QRL3 1481 aa25.5■■□□□ 1.67
Med28-202ENSMUST00000118833 Rad54l2Q99NG0 1466 aa25.49■■□□□ 1.67
Med28-202ENSMUST00000118833 Cc2d2bA0A286YDU8 1405 aa25.49■■□□□ 1.67
Med28-202ENSMUST00000118833 Zcchc11B2RX14 1644 aaKnown RBP25.48■■□□□ 1.67
Med28-202ENSMUST00000118833 Magi3Q9EQJ9 1476 aa25.43■■□□□ 1.66
Med28-202ENSMUST00000118833 Top2aQ01320 1528 aaKnown RBP25.42■■□□□ 1.66
Med28-202ENSMUST00000118833 Grin2aP35436 1464 aa25.4■■□□□ 1.66
Med28-202ENSMUST00000118833 AqrQ8CFQ3 1481 aaKnown RBP25.36■■□□□ 1.65
Med28-202ENSMUST00000118833 NrkQ9R0G8 1455 aa25.35■■□□□ 1.65
Med28-202ENSMUST00000118833 PtprkP35822 1457 aa25.32■■□□□ 1.64
Med28-202ENSMUST00000118833 Shroom4Q1W617 1475 aa25.27■■□□□ 1.64
Med28-202ENSMUST00000118833 Pla2r1Q62028 1487 aa25.27■■□□□ 1.64
Med28-202ENSMUST00000118833 Chic1Q8CBW7 227 aa25.26■■□□□ 1.63
Med28-202ENSMUST00000118833 Fgd6Q69ZL1 1399 aa25.26■■□□□ 1.63
Med28-202ENSMUST00000118833 Gpatch8A2A6A1 1505 aa25.25■■□□□ 1.63
Med28-202ENSMUST00000118833 Cep170Q6A065 1588 aa25.22■■□□□ 1.63
Med28-202ENSMUST00000118833 Adgrl3Q80TS3 1537 aa25.22■■□□□ 1.63
Med28-202ENSMUST00000118833 SynmQ70IV5 1561 aa25.22■■□□□ 1.63
Med28-202ENSMUST00000118833 Gapvd1Q6PAR5 1458 aa25.18■■□□□ 1.62
Med28-202ENSMUST00000118833 Arhgef5E9Q7D5 1581 aa25.12■■□□□ 1.61
Retrieved 100 of 22,080 RNA–protein pairs in 12.3 ms