RNA–Protein interactions for RNA: ENSMUST00000115795.8

Nde1-202, Transcript of Nuclear distribution protein nudE homolog 1, mousemouse

TSL 1 (best) BASIC

Gene Nde1, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nde1-202ENSMUST00000115795 NischQ80TM9 1593 aa20.54■□□□□ 0.88
Nde1-202ENSMUST00000115795 Gm35339A0A140LHH9 1649 aa20.46■□□□□ 0.87
Nde1-202ENSMUST00000115795 Abcc9P70170 1546 aa19.91■□□□□ 0.78
Nde1-202ENSMUST00000115795 Abcc8B2RUS7 1588 aa19.67■□□□□ 0.74
Nde1-202ENSMUST00000115795 ScribQ80U72 1612 aa18.68■□□□□ 0.58
Nde1-202ENSMUST00000115795 Rhox8Q6VSS7 320 aa18.46■□□□□ 0.55
Nde1-202ENSMUST00000115795 Kdm5dQ62240 1548 aa18.19■□□□□ 0.5
Nde1-202ENSMUST00000115795 Dcaf1Q80TR8 1506 aa18.15■□□□□ 0.5
Nde1-202ENSMUST00000115795 NacadQ5SWP3 1504 aa18.07■□□□□ 0.48
Nde1-202ENSMUST00000115795 Rb1cc1Q9ESK9 1588 aa17.97■□□□□ 0.47
Nde1-202ENSMUST00000115795 Baz1aO88379 1555 aa17.71■□□□□ 0.43
Nde1-202ENSMUST00000115795 Sycp2Q9CUU3 1500 aa17.71■□□□□ 0.43
Nde1-202ENSMUST00000115795 Ccdc180J3QNE4 1664 aa17.64■□□□□ 0.41
Nde1-202ENSMUST00000115795 Rtl1Q7M732 1744 aa17.55■□□□□ 0.4
Nde1-202ENSMUST00000115795 Zcchc6Q5BLK4 1491 aaKnown RBP17.46■□□□□ 0.39
Nde1-202ENSMUST00000115795 BicraF8VPZ9 1578 aa17.43■□□□□ 0.38
Nde1-202ENSMUST00000115795 Crybg2B7ZCC2 1516 aa17.41■□□□□ 0.38
Nde1-202ENSMUST00000115795 Smarca2Q6DIC0 1577 aa17.26■□□□□ 0.35
Nde1-202ENSMUST00000115795 Ccdc136Q3TVA9 1136 aa17.21■□□□□ 0.35
Nde1-202ENSMUST00000115795 Cecr2E9Q2Z1 1453 aa17.06■□□□□ 0.32
Nde1-202ENSMUST00000115795 Smarca4Q3TKT4 1613 aaKnown RBP16.83■□□□□ 0.28
Nde1-202ENSMUST00000115795 Synj1Q8CHC4 1574 aa16.79■□□□□ 0.28
Nde1-202ENSMUST00000115795 Trim41Q5NCC3 630 aa16.79■□□□□ 0.28
Nde1-202ENSMUST00000115795 Brd4Q9ESU6 1400 aaKnown RBP16.78■□□□□ 0.28
Nde1-202ENSMUST00000115795 Pds5bQ4VA53 1446 aaKnown RBP16.72■□□□□ 0.27
Nde1-202ENSMUST00000115795 CftrP26361 1476 aa16.7■□□□□ 0.26
Nde1-202ENSMUST00000115795 Atad2bE9Q166 1460 aaKnown RBP16.7■□□□□ 0.26
Nde1-202ENSMUST00000115795 Iqgap2Q3UQ44 1575 aa16.69■□□□□ 0.26
Nde1-202ENSMUST00000115795 Cttnbp2B9EJA2 1648 aa16.65■□□□□ 0.26
Nde1-202ENSMUST00000115795 Esf1Q3V1V3 845 aaKnown RBP16.53■□□□□ 0.24
Nde1-202ENSMUST00000115795 Cngb1E1AZ71 1325 aa16.52■□□□□ 0.23
Nde1-202ENSMUST00000115795 Golga3P55937 1487 aa16.44■□□□□ 0.22
Nde1-202ENSMUST00000115795 Ercc6F8VPZ5 1481 aa16.43■□□□□ 0.22
Nde1-202ENSMUST00000115795 Frmpd1A2AKB4 1549 aa16.43■□□□□ 0.22
Nde1-202ENSMUST00000115795 Wdr62Q3U3T8 1523 aa16.43■□□□□ 0.22
Nde1-202ENSMUST00000115795 Thoc2B1AZI6 1594 aaKnown RBP16.41■□□□□ 0.22
Nde1-202ENSMUST00000115795 Top2bQ64511 1612 aa16.35■□□□□ 0.21
Nde1-202ENSMUST00000115795 HrcG5E8J6 738 aa16.35■□□□□ 0.21
Nde1-202ENSMUST00000115795 Cc2d2aQ8CFW7 1633 aa16.28■□□□□ 0.2
Nde1-202ENSMUST00000115795 Unc13aQ4KUS2 1712 aa16.27■□□□□ 0.2
Nde1-202ENSMUST00000115795 Rsf1E9PWW9 1441 aaKnown RBP16.27■□□□□ 0.19
Nde1-202ENSMUST00000115795 Ccdc88bQ4QRL3 1481 aa16.25■□□□□ 0.19
Nde1-202ENSMUST00000115795 Chic1Q8CBW7 227 aa16.24■□□□□ 0.19
Nde1-202ENSMUST00000115795 Dnajc5bQ9CQ94 199 aa16.22■□□□□ 0.19
Nde1-202ENSMUST00000115795 Cep164Q5DU05 1446 aa16.14■□□□□ 0.17
Nde1-202ENSMUST00000115795 Phldb1Q6PDH0 1371 aaKnown RBP16.14■□□□□ 0.17
Nde1-202ENSMUST00000115795 Fam135aQ6NS59 1506 aa16.13■□□□□ 0.17
Nde1-202ENSMUST00000115795 Fmn1Q05860 1466 aa16.11■□□□□ 0.17
Nde1-202ENSMUST00000115795 Kif15Q6P9L6 1387 aa16.07■□□□□ 0.16
Nde1-202ENSMUST00000115795 TnnQ80Z71 1560 aa16.05■□□□□ 0.16
Nde1-202ENSMUST00000115795 Ubl4bQ9CQ84 188 aa16.05■□□□□ 0.16
Nde1-202ENSMUST00000115795 Lamc3Q9R0B6 1581 aa16.05■□□□□ 0.16
Nde1-202ENSMUST00000115795 Gab3Q8BSM5 595 aa16.02■□□□□ 0.15
Nde1-202ENSMUST00000115795 Top2aQ01320 1528 aaKnown RBP15.96■□□□□ 0.14
Nde1-202ENSMUST00000115795 Il27Q8K3I6 234 aa15.94■□□□□ 0.14
Nde1-202ENSMUST00000115795 Cux2P70298 1426 aa15.91■□□□□ 0.14
Nde1-202ENSMUST00000115795 Camsap1A2AHC3 1581 aa15.88■□□□□ 0.13
Nde1-202ENSMUST00000115795 Ccdc18Q640L5 1455 aa15.81■□□□□ 0.12
Nde1-202ENSMUST00000115795 Mrc2Q64449 1479 aa15.79■□□□□ 0.12
Nde1-202ENSMUST00000115795 Npm1Q61937 292 aaKnown RBP15.77■□□□□ 0.12
Nde1-202ENSMUST00000115795 Baz1bQ9Z277 1479 aa15.73■□□□□ 0.11
Nde1-202ENSMUST00000115795 Rapgef2Q8CHG7 1496 aa15.72■□□□□ 0.11
Nde1-202ENSMUST00000115795 PtprkP35822 1457 aa15.71■□□□□ 0.11
Nde1-202ENSMUST00000115795 Grin2bQ01097 1482 aa15.7■□□□□ 0.1
Nde1-202ENSMUST00000115795 Kif21aQ9QXL2 1672 aa15.69■□□□□ 0.1
Nde1-202ENSMUST00000115795 Npm2Q80W85 207 aa15.69■□□□□ 0.1
Nde1-202ENSMUST00000115795 LrpprcQ6PB66 1392 aaKnown RBP15.66■□□□□ 0.1
Nde1-202ENSMUST00000115795 Ehmt2Q9Z148 1263 aaKnown RBP15.65■□□□□ 0.1
Nde1-202ENSMUST00000115795 Shroom4Q1W617 1475 aa15.62■□□□□ 0.09
Nde1-202ENSMUST00000115795 NrkQ9R0G8 1455 aa15.62■□□□□ 0.09
Nde1-202ENSMUST00000115795 Dhx29Q6PGC1 1365 aaKnown RBP15.62■□□□□ 0.09
Nde1-202ENSMUST00000115795 Cep162Q6ZQ06 1403 aa15.61■□□□□ 0.09
Nde1-202ENSMUST00000115795 PogzQ8BZH4 1409 aaKnown RBP15.61■□□□□ 0.09
Nde1-202ENSMUST00000115795 Myt1lP97500 1187 aa15.59■□□□□ 0.09
Nde1-202ENSMUST00000115795 Rpgrip1Q9EPQ2 1331 aa15.59■□□□□ 0.09
Nde1-202ENSMUST00000115795 Duox2A2AQ99 1517 aa15.58■□□□□ 0.08
Nde1-202ENSMUST00000115795 Eif4g1Q6NZJ6 1600 aaKnown RBP15.56■□□□□ 0.08
Nde1-202ENSMUST00000115795 Crocc2F6XLV1 1638 aa15.54■□□□□ 0.08
Nde1-202ENSMUST00000115795 Arhgap35Q91YM2 1499 aa15.53■□□□□ 0.08
Nde1-202ENSMUST00000115795 Zeb1Q64318 1117 aa15.52■□□□□ 0.07
Nde1-202ENSMUST00000115795 Samd9lQ69Z37 1561 aa15.52■□□□□ 0.07
Nde1-202ENSMUST00000115795 Efcab5A0JP43 1406 aa15.5■□□□□ 0.07
Nde1-202ENSMUST00000115795 Plb1Q3TTY0 1478 aa15.47■□□□□ 0.07
Nde1-202ENSMUST00000115795 Lrriq1Q0P5X1 1673 aa15.46■□□□□ 0.07
Nde1-202ENSMUST00000115795 Urb2E9Q7L1 1524 aaKnown RBP15.45■□□□□ 0.06
Nde1-202ENSMUST00000115795 Mroh2bQ7M6Y6 1581 aa15.44■□□□□ 0.06
Nde1-202ENSMUST00000115795 Rad54l2Q99NG0 1466 aa15.43■□□□□ 0.06
Nde1-202ENSMUST00000115795 Map3k1P53349 1493 aa15.4■□□□□ 0.06
Nde1-202ENSMUST00000115795 SynmQ70IV5 1561 aa15.38■□□□□ 0.05
Nde1-202ENSMUST00000115795 Clip1Q922J3 1391 aa15.34■□□□□ 0.05
Nde1-202ENSMUST00000115795 Disp1Q3TDN0 1521 aa15.32■□□□□ 0.04
Nde1-202ENSMUST00000115795 AqrQ8CFQ3 1481 aaKnown RBP15.31■□□□□ 0.04
Nde1-202ENSMUST00000115795 Magi3Q9EQJ9 1476 aa15.31■□□□□ 0.04
Nde1-202ENSMUST00000115795 Pla2r1Q62028 1487 aa15.29■□□□□ 0.04
Nde1-202ENSMUST00000115795 Carmil1Q6EDY6 1374 aa15.29■□□□□ 0.04
Nde1-202ENSMUST00000115795 Ift140E9PY46 1464 aa15.27■□□□□ 0.04
Nde1-202ENSMUST00000115795 Grin2aP35436 1464 aa15.27■□□□□ 0.04
Nde1-202ENSMUST00000115795 Setd1bQ8CFT2 1985 aa15.27■□□□□ 0.04
Nde1-202ENSMUST00000115795 Ap3b1Q9Z1T1 1105 aa15.26■□□□□ 0.03
Nde1-202ENSMUST00000115795 Cux1P53564 1515 aa15.25■□□□□ 0.03
Retrieved 100 of 22,080 RNA–protein pairs in 14.9 ms