RNA–Protein interactions for RNA: ENSMUST00000113687.7

Tpm1-207, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 5 BASIC

Gene Tpm1, Length 962 nt, Biotype protein coding, Subcellular localisation Axon .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-207ENSMUST00000113687 Gm35339A0A140LHH9 1649 aa27.93■■■□□ 2.06
Tpm1-207ENSMUST00000113687 NischQ80TM9 1593 aa27.73■■■□□ 2.03
Tpm1-207ENSMUST00000113687 Abcc9P70170 1546 aa26.83■■□□□ 1.89
Tpm1-207ENSMUST00000113687 Abcc8B2RUS7 1588 aa26.77■■□□□ 1.88
Tpm1-207ENSMUST00000113687 ScribQ80U72 1612 aa25.72■■□□□ 1.71
Tpm1-207ENSMUST00000113687 NacadQ5SWP3 1504 aa24.92■■□□□ 1.58
Tpm1-207ENSMUST00000113687 Kdm5dQ62240 1548 aa24.92■■□□□ 1.58
Tpm1-207ENSMUST00000113687 Dcaf1Q80TR8 1506 aa24.59■■□□□ 1.53
Tpm1-207ENSMUST00000113687 Sycp2Q9CUU3 1500 aa24.44■■□□□ 1.5
Tpm1-207ENSMUST00000113687 Rhox8Q6VSS7 320 aa24.26■■□□□ 1.47
Tpm1-207ENSMUST00000113687 Rb1cc1Q9ESK9 1588 aa24.18■■□□□ 1.46
Tpm1-207ENSMUST00000113687 BicraF8VPZ9 1578 aa24.09■■□□□ 1.45
Tpm1-207ENSMUST00000113687 Baz1aO88379 1555 aa23.83■■□□□ 1.41
Tpm1-207ENSMUST00000113687 Ccdc180J3QNE4 1664 aa23.7■■□□□ 1.39
Tpm1-207ENSMUST00000113687 Crybg2B7ZCC2 1516 aa23.66■■□□□ 1.38
Tpm1-207ENSMUST00000113687 Zcchc6Q5BLK4 1491 aaKnown RBP23.55■■□□□ 1.36
Tpm1-207ENSMUST00000113687 Pds5bQ4VA53 1446 aaKnown RBP23.37■■□□□ 1.33
Tpm1-207ENSMUST00000113687 Dnajc5bQ9CQ94 199 aa23.36■■□□□ 1.33
Tpm1-207ENSMUST00000113687 Atad2bE9Q166 1460 aaKnown RBP23.18■■□□□ 1.3
Tpm1-207ENSMUST00000113687 Smarca2Q6DIC0 1577 aa23.14■■□□□ 1.3
Tpm1-207ENSMUST00000113687 Cecr2E9Q2Z1 1453 aa23.11■■□□□ 1.29
Tpm1-207ENSMUST00000113687 Thoc2B1AZI6 1594 aaKnown RBP23.1■■□□□ 1.29
Tpm1-207ENSMUST00000113687 Smarca4Q3TKT4 1613 aaKnown RBP23.04■■□□□ 1.28
Tpm1-207ENSMUST00000113687 Iqgap2Q3UQ44 1575 aa22.9■■□□□ 1.26
Tpm1-207ENSMUST00000113687 Ercc6F8VPZ5 1481 aa22.89■■□□□ 1.25
Tpm1-207ENSMUST00000113687 Rtl1Q7M732 1744 aa22.82■■□□□ 1.24
Tpm1-207ENSMUST00000113687 Cc2d2aQ8CFW7 1633 aa22.78■■□□□ 1.24
Tpm1-207ENSMUST00000113687 Ccdc136Q3TVA9 1136 aa22.7■■□□□ 1.22
Tpm1-207ENSMUST00000113687 Frmpd1A2AKB4 1549 aa22.69■■□□□ 1.22
Tpm1-207ENSMUST00000113687 Wdr62Q3U3T8 1523 aa22.67■■□□□ 1.22
Tpm1-207ENSMUST00000113687 Fam135aQ6NS59 1506 aa22.6■■□□□ 1.21
Tpm1-207ENSMUST00000113687 CftrP26361 1476 aa22.55■■□□□ 1.2
Tpm1-207ENSMUST00000113687 Synj1Q8CHC4 1574 aa22.55■■□□□ 1.2
Tpm1-207ENSMUST00000113687 Brd4Q9ESU6 1400 aaKnown RBP22.52■■□□□ 1.2
Tpm1-207ENSMUST00000113687 Phldb1Q6PDH0 1371 aaKnown RBP22.51■■□□□ 1.19
Tpm1-207ENSMUST00000113687 Cttnbp2B9EJA2 1648 aa22.47■■□□□ 1.19
Tpm1-207ENSMUST00000113687 Ubl4bQ9CQ84 188 aa22.39■■□□□ 1.17
Tpm1-207ENSMUST00000113687 Unc13aQ4KUS2 1712 aa22.33■■□□□ 1.17
Tpm1-207ENSMUST00000113687 Esf1Q3V1V3 845 aaKnown RBP22.27■■□□□ 1.16
Tpm1-207ENSMUST00000113687 Trim41Q5NCC3 630 aa22.26■■□□□ 1.15
Tpm1-207ENSMUST00000113687 Baz1bQ9Z277 1479 aa22.22■■□□□ 1.15
Tpm1-207ENSMUST00000113687 Mrc2Q64449 1479 aa22.11■■□□□ 1.13
Tpm1-207ENSMUST00000113687 Rsf1E9PWW9 1441 aaKnown RBP21.97■■□□□ 1.11
Tpm1-207ENSMUST00000113687 Kif15Q6P9L6 1387 aa21.97■■□□□ 1.11
Tpm1-207ENSMUST00000113687 Cux2P70298 1426 aa21.9■■□□□ 1.1
Tpm1-207ENSMUST00000113687 Cngb1E1AZ71 1325 aa21.83■■□□□ 1.09
Tpm1-207ENSMUST00000113687 Lamc3Q9R0B6 1581 aa21.83■■□□□ 1.09
Tpm1-207ENSMUST00000113687 Golga3P55937 1487 aa21.81■■□□□ 1.08
Tpm1-207ENSMUST00000113687 Top2bQ64511 1612 aa21.72■■□□□ 1.07
Tpm1-207ENSMUST00000113687 Npm1Q61937 292 aaKnown RBP21.71■■□□□ 1.07
Tpm1-207ENSMUST00000113687 Kif21aQ9QXL2 1672 aa21.66■■□□□ 1.06
Tpm1-207ENSMUST00000113687 Il27Q8K3I6 234 aa21.63■■□□□ 1.05
Tpm1-207ENSMUST00000113687 TnnQ80Z71 1560 aa21.62■■□□□ 1.05
Tpm1-207ENSMUST00000113687 Lrriq1Q0P5X1 1673 aa21.61■■□□□ 1.05
Tpm1-207ENSMUST00000113687 Cep164Q5DU05 1446 aa21.6■■□□□ 1.05
Tpm1-207ENSMUST00000113687 Ccdc18Q640L5 1455 aa21.52■■□□□ 1.04
Tpm1-207ENSMUST00000113687 Fmn1Q05860 1466 aa21.51■■□□□ 1.03
Tpm1-207ENSMUST00000113687 Camsap1A2AHC3 1581 aa21.47■■□□□ 1.03
Tpm1-207ENSMUST00000113687 Dhx29Q6PGC1 1365 aaKnown RBP21.46■■□□□ 1.03
Tpm1-207ENSMUST00000113687 LrpprcQ6PB66 1392 aaKnown RBP21.42■■□□□ 1.02
Tpm1-207ENSMUST00000113687 Urb2E9Q7L1 1524 aaKnown RBP21.36■■□□□ 1.01
Tpm1-207ENSMUST00000113687 Plb1Q3TTY0 1478 aa21.36■■□□□ 1.01
Tpm1-207ENSMUST00000113687 Ccdc88bQ4QRL3 1481 aa21.32■■□□□ 1
Tpm1-207ENSMUST00000113687 PogzQ8BZH4 1409 aaKnown RBP21.29■■□□□ 1
Tpm1-207ENSMUST00000113687 Crocc2F6XLV1 1638 aa21.29■■□□□ 1
Tpm1-207ENSMUST00000113687 Eif4g3Q80XI3 1579 aaKnown RBP21.28■■□□□ 1
Tpm1-207ENSMUST00000113687 Chic1Q8CBW7 227 aa21.25■□□□□ 0.99
Tpm1-207ENSMUST00000113687 Grin2bQ01097 1482 aa21.21■□□□□ 0.99
Tpm1-207ENSMUST00000113687 Duox2A2AQ99 1517 aa21.21■□□□□ 0.99
Tpm1-207ENSMUST00000113687 Top2aQ01320 1528 aaKnown RBP21.12■□□□□ 0.97
Tpm1-207ENSMUST00000113687 Ift140E9PY46 1464 aa21.12■□□□□ 0.97
Tpm1-207ENSMUST00000113687 Efcab5A0JP43 1406 aa21.04■□□□□ 0.96
Tpm1-207ENSMUST00000113687 Samd9lQ69Z37 1561 aa21.04■□□□□ 0.96
Tpm1-207ENSMUST00000113687 Disp1Q3TDN0 1521 aa21.04■□□□□ 0.96
Tpm1-207ENSMUST00000113687 Rusc2Q80U22 1514 aa21■□□□□ 0.95
Tpm1-207ENSMUST00000113687 NrkQ9R0G8 1455 aa20.99■□□□□ 0.95
Tpm1-207ENSMUST00000113687 PtprkP35822 1457 aa20.98■□□□□ 0.95
Tpm1-207ENSMUST00000113687 Rad54l2Q99NG0 1466 aa20.96■□□□□ 0.95
Tpm1-207ENSMUST00000113687 Shroom2A2ALU4 1481 aa20.92■□□□□ 0.94
Tpm1-207ENSMUST00000113687 Shroom4Q1W617 1475 aa20.92■□□□□ 0.94
Tpm1-207ENSMUST00000113687 Nup160Q9Z0W3 1402 aaKnown RBP20.9■□□□□ 0.94
Tpm1-207ENSMUST00000113687 Dnajc5P60904 198 aa20.9■□□□□ 0.94
Tpm1-207ENSMUST00000113687 Cc2d2bA0A286YDU8 1405 aa20.85■□□□□ 0.93
Tpm1-207ENSMUST00000113687 Magi3Q9EQJ9 1476 aa20.84■□□□□ 0.93
Tpm1-207ENSMUST00000113687 HrcG5E8J6 738 aa20.84■□□□□ 0.93
Tpm1-207ENSMUST00000113687 Pabpn1Q8CCS6 302 aaKnown RBP20.84■□□□□ 0.93
Tpm1-207ENSMUST00000113687 Pbrm1Q8BSQ9 1634 aaKnown RBP20.84■□□□□ 0.93
Tpm1-207ENSMUST00000113687 Setd1bQ8CFT2 1985 aa20.84■□□□□ 0.93
Tpm1-207ENSMUST00000113687 Grin2aP35436 1464 aa20.83■□□□□ 0.93
Tpm1-207ENSMUST00000113687 Zeb1Q64318 1117 aa20.82■□□□□ 0.92
Tpm1-207ENSMUST00000113687 Pelp1Q9DBD5 1123 aaKnown RBP20.8■□□□□ 0.92
Tpm1-207ENSMUST00000113687 Npm2Q80W85 207 aa20.79■□□□□ 0.92
Tpm1-207ENSMUST00000113687 Gab3Q8BSM5 595 aa20.79■□□□□ 0.92
Tpm1-207ENSMUST00000113687 SynmQ70IV5 1561 aa20.76■□□□□ 0.91
Tpm1-207ENSMUST00000113687 Pla2r1Q62028 1487 aa20.74■□□□□ 0.91
Tpm1-207ENSMUST00000113687 AqrQ8CFQ3 1481 aaKnown RBP20.73■□□□□ 0.91
Tpm1-207ENSMUST00000113687 Mroh2bQ7M6Y6 1581 aa20.65■□□□□ 0.9
Tpm1-207ENSMUST00000113687 Col17a1Q07563 1470 aa20.65■□□□□ 0.9
Tpm1-207ENSMUST00000113687 Rapgef2Q8CHG7 1496 aa20.64■□□□□ 0.89
Tpm1-207ENSMUST00000113687 Fgd6Q69ZL1 1399 aa20.64■□□□□ 0.89
Retrieved 100 of 22,080 RNA–protein pairs in 155.3 ms