RNA–Protein interactions for RNA: ENSMUST00000113684.7

Tpm1-204, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 5 BASIC

Gene Tpm1, Length 887 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-204ENSMUST00000113684 Gm35339A0A140LHH9 1649 aa40.89■■■■■ 4.14
Tpm1-204ENSMUST00000113684 NischQ80TM9 1593 aa40.19■■■■■ 4.02
Tpm1-204ENSMUST00000113684 Abcc9P70170 1546 aa39.14■■■■□ 3.86
Tpm1-204ENSMUST00000113684 Abcc8B2RUS7 1588 aa39.08■■■■□ 3.85
Tpm1-204ENSMUST00000113684 ScribQ80U72 1612 aa38.12■■■■□ 3.69
Tpm1-204ENSMUST00000113684 NacadQ5SWP3 1504 aa36.79■■■■□ 3.48
Tpm1-204ENSMUST00000113684 Kdm5dQ62240 1548 aa36.7■■■■□ 3.47
Tpm1-204ENSMUST00000113684 Sycp2Q9CUU3 1500 aa36.13■■■■□ 3.37
Tpm1-204ENSMUST00000113684 Dnajc5bQ9CQ94 199 aa36.07■■■■□ 3.36
Tpm1-204ENSMUST00000113684 BicraF8VPZ9 1578 aa35.76■■■■□ 3.32
Tpm1-204ENSMUST00000113684 Dcaf1Q80TR8 1506 aa35.71■■■■□ 3.31
Tpm1-204ENSMUST00000113684 Rb1cc1Q9ESK9 1588 aa34.97■■■■□ 3.19
Tpm1-204ENSMUST00000113684 Pds5bQ4VA53 1446 aaKnown RBP34.89■■■■□ 3.18
Tpm1-204ENSMUST00000113684 Thoc2B1AZI6 1594 aaKnown RBP34.86■■■■□ 3.17
Tpm1-204ENSMUST00000113684 Rhox8Q6VSS7 320 aa34.52■■■■□ 3.12
Tpm1-204ENSMUST00000113684 Baz1aO88379 1555 aa34.44■■■■□ 3.1
Tpm1-204ENSMUST00000113684 Atad2bE9Q166 1460 aaKnown RBP34.41■■■■□ 3.1
Tpm1-204ENSMUST00000113684 Ccdc180J3QNE4 1664 aa34.39■■■■□ 3.1
Tpm1-204ENSMUST00000113684 Crybg2B7ZCC2 1516 aa34.31■■■■□ 3.08
Tpm1-204ENSMUST00000113684 Cc2d2aQ8CFW7 1633 aa34.31■■■■□ 3.08
Tpm1-204ENSMUST00000113684 Zcchc6Q5BLK4 1491 aaKnown RBP34.16■■■■□ 3.06
Tpm1-204ENSMUST00000113684 Ercc6F8VPZ5 1481 aa34.15■■■■□ 3.06
Tpm1-204ENSMUST00000113684 Smarca2Q6DIC0 1577 aa33.94■■■■□ 3.02
Tpm1-204ENSMUST00000113684 Fam135aQ6NS59 1506 aa33.91■■■■□ 3.02
Tpm1-204ENSMUST00000113684 Smarca4Q3TKT4 1613 aaKnown RBP33.82■■■■□ 3.01
Tpm1-204ENSMUST00000113684 Iqgap2Q3UQ44 1575 aa33.77■■■■□ 3
Tpm1-204ENSMUST00000113684 Cecr2E9Q2Z1 1453 aa33.66■■■□□ 2.98
Tpm1-204ENSMUST00000113684 Wdr62Q3U3T8 1523 aa33.6■■■□□ 2.97
Tpm1-204ENSMUST00000113684 Frmpd1A2AKB4 1549 aa33.59■■■□□ 2.97
Tpm1-204ENSMUST00000113684 Phldb1Q6PDH0 1371 aaKnown RBP33.56■■■□□ 2.96
Tpm1-204ENSMUST00000113684 Ubl4bQ9CQ84 188 aa33.39■■■□□ 2.94
Tpm1-204ENSMUST00000113684 Baz1bQ9Z277 1479 aa33.32■■■□□ 2.92
Tpm1-204ENSMUST00000113684 Dnajc5P60904 198 aa33.25■■■□□ 2.91
Tpm1-204ENSMUST00000113684 Mrc2Q64449 1479 aa33.17■■■□□ 2.9
Tpm1-204ENSMUST00000113684 Trim41Q5NCC3 630 aa33.1■■■□□ 2.89
Tpm1-204ENSMUST00000113684 Unc13aQ4KUS2 1712 aa32.99■■■□□ 2.87
Tpm1-204ENSMUST00000113684 Rtl1Q7M732 1744 aa32.8■■■□□ 2.84
Tpm1-204ENSMUST00000113684 CftrP26361 1476 aa32.67■■■□□ 2.82
Tpm1-204ENSMUST00000113684 Cttnbp2B9EJA2 1648 aa32.56■■■□□ 2.8
Tpm1-204ENSMUST00000113684 Synj1Q8CHC4 1574 aa32.55■■■□□ 2.8
Tpm1-204ENSMUST00000113684 Lrriq1Q0P5X1 1673 aa32.47■■■□□ 2.79
Tpm1-204ENSMUST00000113684 Brd4Q9ESU6 1400 aaKnown RBP32.45■■■□□ 2.79
Tpm1-204ENSMUST00000113684 Ccdc136Q3TVA9 1136 aa32.35■■■□□ 2.77
Tpm1-204ENSMUST00000113684 Rsf1E9PWW9 1441 aaKnown RBP32.34■■■□□ 2.77
Tpm1-204ENSMUST00000113684 Cux2P70298 1426 aa32.34■■■□□ 2.77
Tpm1-204ENSMUST00000113684 Kif15Q6P9L6 1387 aa32.21■■■□□ 2.75
Tpm1-204ENSMUST00000113684 Kif21aQ9QXL2 1672 aa32.18■■■□□ 2.74
Tpm1-204ENSMUST00000113684 Esf1Q3V1V3 845 aaKnown RBP32.16■■■□□ 2.74
Tpm1-204ENSMUST00000113684 Shroom2A2ALU4 1481 aa32.01■■■□□ 2.71
Tpm1-204ENSMUST00000113684 Eif4g3Q80XI3 1579 aaKnown RBP31.97■■■□□ 2.71
Tpm1-204ENSMUST00000113684 Npm1Q61937 292 aaKnown RBP31.96■■■□□ 2.71
Tpm1-204ENSMUST00000113684 Lamc3Q9R0B6 1581 aa31.83■■■□□ 2.69
Tpm1-204ENSMUST00000113684 Col17a1Q07563 1470 aa31.78■■■□□ 2.68
Tpm1-204ENSMUST00000113684 Cep164Q5DU05 1446 aa31.74■■■□□ 2.67
Tpm1-204ENSMUST00000113684 Urb2E9Q7L1 1524 aaKnown RBP31.71■■■□□ 2.67
Tpm1-204ENSMUST00000113684 Plb1Q3TTY0 1478 aa31.65■■■□□ 2.66
Tpm1-204ENSMUST00000113684 Pabpn1Q8CCS6 302 aaKnown RBP31.65■■■□□ 2.66
Tpm1-204ENSMUST00000113684 Dhx29Q6PGC1 1365 aaKnown RBP31.61■■■□□ 2.65
Tpm1-204ENSMUST00000113684 Il27Q8K3I6 234 aa31.58■■■□□ 2.65
Tpm1-204ENSMUST00000113684 Top2bQ64511 1612 aa31.51■■■□□ 2.63
Tpm1-204ENSMUST00000113684 Pelp1Q9DBD5 1123 aaKnown RBP31.48■■■□□ 2.63
Tpm1-204ENSMUST00000113684 LrpprcQ6PB66 1392 aaKnown RBP31.4■■■□□ 2.62
Tpm1-204ENSMUST00000113684 Ccdc18Q640L5 1455 aa31.4■■■□□ 2.62
Tpm1-204ENSMUST00000113684 Crocc2F6XLV1 1638 aa31.36■■■□□ 2.61
Tpm1-204ENSMUST00000113684 Golga3P55937 1487 aa31.34■■■□□ 2.61
Tpm1-204ENSMUST00000113684 TnnQ80Z71 1560 aa31.3■■■□□ 2.6
Tpm1-204ENSMUST00000113684 Rusc2Q80U22 1514 aa31.29■■■□□ 2.6
Tpm1-204ENSMUST00000113684 Ift140E9PY46 1464 aa31.24■■■□□ 2.59
Tpm1-204ENSMUST00000113684 Camsap1A2AHC3 1581 aa31.21■■■□□ 2.59
Tpm1-204ENSMUST00000113684 PogzQ8BZH4 1409 aaKnown RBP31.15■■■□□ 2.58
Tpm1-204ENSMUST00000113684 Zcchc11B2RX14 1644 aaKnown RBP31.14■■■□□ 2.58
Tpm1-204ENSMUST00000113684 Cngb1E1AZ71 1325 aa31.13■■■□□ 2.57
Tpm1-204ENSMUST00000113684 Pcdh10E9PXQ7 1057 aa31.03■■■□□ 2.56
Tpm1-204ENSMUST00000113684 Fmn1Q05860 1466 aa30.99■■■□□ 2.55
Tpm1-204ENSMUST00000113684 Duox2A2AQ99 1517 aa30.98■■■□□ 2.55
Tpm1-204ENSMUST00000113684 Disp1Q3TDN0 1521 aa30.98■■■□□ 2.55
Tpm1-204ENSMUST00000113684 Adgrl3Q80TS3 1537 aa30.85■■■□□ 2.53
Tpm1-204ENSMUST00000113684 Ttbk1Q6PCN3 1308 aa30.83■■■□□ 2.53
Tpm1-204ENSMUST00000113684 Nup160Q9Z0W3 1402 aaKnown RBP30.81■■■□□ 2.52
Tpm1-204ENSMUST00000113684 Cc2d2bA0A286YDU8 1405 aa30.79■■■□□ 2.52
Tpm1-204ENSMUST00000113684 Arhgef5E9Q7D5 1581 aa30.78■■■□□ 2.52
Tpm1-204ENSMUST00000113684 Grin2bQ01097 1482 aa30.75■■■□□ 2.51
Tpm1-204ENSMUST00000113684 PtprkP35822 1457 aa30.74■■■□□ 2.51
Tpm1-204ENSMUST00000113684 Samd9lQ69Z37 1561 aa30.73■■■□□ 2.51
Tpm1-204ENSMUST00000113684 Gm156Q58A37 223 aa30.69■■■□□ 2.5
Tpm1-204ENSMUST00000113684 Cep170Q6A065 1588 aa30.66■■■□□ 2.5
Tpm1-204ENSMUST00000113684 Gapvd1Q6PAR5 1458 aa30.64■■■□□ 2.5
Tpm1-204ENSMUST00000113684 Pbrm1Q8BSQ9 1634 aaKnown RBP30.64■■■□□ 2.5
Tpm1-204ENSMUST00000113684 Setd1bQ8CFT2 1985 aa30.63■■■□□ 2.49
Tpm1-204ENSMUST00000113684 Fgd6Q69ZL1 1399 aa30.62■■■□□ 2.49
Tpm1-204ENSMUST00000113684 Rad54l2Q99NG0 1466 aa30.62■■■□□ 2.49
Tpm1-204ENSMUST00000113684 PtprtQ99M80 1454 aa30.6■■■□□ 2.49
Tpm1-204ENSMUST00000113684 AqrQ8CFQ3 1481 aaKnown RBP30.56■■■□□ 2.48
Tpm1-204ENSMUST00000113684 Efcab5A0JP43 1406 aa30.54■■■□□ 2.48
Tpm1-204ENSMUST00000113684 Ccdc88bQ4QRL3 1481 aa30.53■■■□□ 2.48
Tpm1-204ENSMUST00000113684 Grin2aP35436 1464 aa30.51■■■□□ 2.48
Tpm1-204ENSMUST00000113684 Magi3Q9EQJ9 1476 aa30.49■■■□□ 2.47
Tpm1-204ENSMUST00000113684 AknaQ80VW7 1404 aa30.47■■■□□ 2.47
Tpm1-204ENSMUST00000113684 Top2aQ01320 1528 aaKnown RBP30.4■■■□□ 2.46
Tpm1-204ENSMUST00000113684 Abcc1O35379 1528 aa30.38■■■□□ 2.45
Retrieved 100 of 22,080 RNA–protein pairs in 30.4 ms