RNA–Protein interactions for RNA: ENSMUST00000112882.8

Cldn18-202, Transcript of Claudin-18, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Cldn18, Length 1,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn18-202ENSMUST00000112882 Gm35339A0A140LHH9 1649 aa27.67■■■□□ 2.02
Cldn18-202ENSMUST00000112882 NischQ80TM9 1593 aa27.17■■□□□ 1.94
Cldn18-202ENSMUST00000112882 Abcc8B2RUS7 1588 aa26.38■■□□□ 1.81
Cldn18-202ENSMUST00000112882 Abcc9P70170 1546 aa26.32■■□□□ 1.8
Cldn18-202ENSMUST00000112882 ScribQ80U72 1612 aa25.56■■□□□ 1.68
Cldn18-202ENSMUST00000112882 NacadQ5SWP3 1504 aa24.66■■□□□ 1.54
Cldn18-202ENSMUST00000112882 Kdm5dQ62240 1548 aa24.63■■□□□ 1.53
Cldn18-202ENSMUST00000112882 Dcaf1Q80TR8 1506 aa24.23■■□□□ 1.47
Cldn18-202ENSMUST00000112882 Sycp2Q9CUU3 1500 aa24.22■■□□□ 1.47
Cldn18-202ENSMUST00000112882 BicraF8VPZ9 1578 aa23.95■■□□□ 1.42
Cldn18-202ENSMUST00000112882 Rb1cc1Q9ESK9 1588 aa23.65■■□□□ 1.38
Cldn18-202ENSMUST00000112882 Dnajc5bQ9CQ94 199 aa23.53■■□□□ 1.36
Cldn18-202ENSMUST00000112882 Baz1aO88379 1555 aa23.32■■□□□ 1.32
Cldn18-202ENSMUST00000112882 Crybg2B7ZCC2 1516 aa23.29■■□□□ 1.32
Cldn18-202ENSMUST00000112882 Ccdc180J3QNE4 1664 aa23.28■■□□□ 1.32
Cldn18-202ENSMUST00000112882 Pds5bQ4VA53 1446 aaKnown RBP23.21■■□□□ 1.31
Cldn18-202ENSMUST00000112882 Thoc2B1AZI6 1594 aaKnown RBP23.16■■□□□ 1.3
Cldn18-202ENSMUST00000112882 Rhox8Q6VSS7 320 aa23.14■■□□□ 1.29
Cldn18-202ENSMUST00000112882 Atad2bE9Q166 1460 aaKnown RBP23■■□□□ 1.27
Cldn18-202ENSMUST00000112882 Zcchc6Q5BLK4 1491 aaKnown RBP22.94■■□□□ 1.26
Cldn18-202ENSMUST00000112882 Cc2d2aQ8CFW7 1633 aa22.73■■□□□ 1.23
Cldn18-202ENSMUST00000112882 Smarca4Q3TKT4 1613 aaKnown RBP22.72■■□□□ 1.23
Cldn18-202ENSMUST00000112882 Smarca2Q6DIC0 1577 aa22.72■■□□□ 1.23
Cldn18-202ENSMUST00000112882 Cecr2E9Q2Z1 1453 aa22.68■■□□□ 1.22
Cldn18-202ENSMUST00000112882 Ercc6F8VPZ5 1481 aa22.67■■□□□ 1.22
Cldn18-202ENSMUST00000112882 Iqgap2Q3UQ44 1575 aa22.63■■□□□ 1.21
Cldn18-202ENSMUST00000112882 Fam135aQ6NS59 1506 aa22.59■■□□□ 1.21
Cldn18-202ENSMUST00000112882 Wdr62Q3U3T8 1523 aa22.49■■□□□ 1.19
Cldn18-202ENSMUST00000112882 Frmpd1A2AKB4 1549 aa22.47■■□□□ 1.19
Cldn18-202ENSMUST00000112882 Phldb1Q6PDH0 1371 aaKnown RBP22.33■■□□□ 1.17
Cldn18-202ENSMUST00000112882 Baz1bQ9Z277 1479 aa22.28■■□□□ 1.16
Cldn18-202ENSMUST00000112882 Unc13aQ4KUS2 1712 aa22.14■■□□□ 1.14
Cldn18-202ENSMUST00000112882 CftrP26361 1476 aa22.1■■□□□ 1.13
Cldn18-202ENSMUST00000112882 Ubl4bQ9CQ84 188 aa22.08■■□□□ 1.13
Cldn18-202ENSMUST00000112882 Cttnbp2B9EJA2 1648 aa22.04■■□□□ 1.12
Cldn18-202ENSMUST00000112882 Synj1Q8CHC4 1574 aa22.03■■□□□ 1.12
Cldn18-202ENSMUST00000112882 Mrc2Q64449 1479 aa22.01■■□□□ 1.11
Cldn18-202ENSMUST00000112882 Rtl1Q7M732 1744 aa21.99■■□□□ 1.11
Cldn18-202ENSMUST00000112882 Brd4Q9ESU6 1400 aaKnown RBP21.92■■□□□ 1.1
Cldn18-202ENSMUST00000112882 Ccdc136Q3TVA9 1136 aa21.74■■□□□ 1.07
Cldn18-202ENSMUST00000112882 Cux2P70298 1426 aa21.58■■□□□ 1.05
Cldn18-202ENSMUST00000112882 Rsf1E9PWW9 1441 aaKnown RBP21.56■■□□□ 1.04
Cldn18-202ENSMUST00000112882 Lrriq1Q0P5X1 1673 aa21.54■■□□□ 1.04
Cldn18-202ENSMUST00000112882 Kif15Q6P9L6 1387 aa21.53■■□□□ 1.04
Cldn18-202ENSMUST00000112882 Esf1Q3V1V3 845 aaKnown RBP21.51■■□□□ 1.03
Cldn18-202ENSMUST00000112882 Lamc3Q9R0B6 1581 aa21.49■■□□□ 1.03
Cldn18-202ENSMUST00000112882 Kif21aQ9QXL2 1672 aa21.46■■□□□ 1.03
Cldn18-202ENSMUST00000112882 Dnajc5P60904 198 aa21.39■■□□□ 1.01
Cldn18-202ENSMUST00000112882 Trim41Q5NCC3 630 aa21.38■■□□□ 1.01
Cldn18-202ENSMUST00000112882 Npm1Q61937 292 aaKnown RBP21.25■□□□□ 0.99
Cldn18-202ENSMUST00000112882 Eif4g3Q80XI3 1579 aaKnown RBP21.24■□□□□ 0.99
Cldn18-202ENSMUST00000112882 TnnQ80Z71 1560 aa21.22■□□□□ 0.99
Cldn18-202ENSMUST00000112882 Cep164Q5DU05 1446 aa21.22■□□□□ 0.99
Cldn18-202ENSMUST00000112882 Top2bQ64511 1612 aa21.16■□□□□ 0.98
Cldn18-202ENSMUST00000112882 Urb2E9Q7L1 1524 aaKnown RBP21.16■□□□□ 0.98
Cldn18-202ENSMUST00000112882 Dhx29Q6PGC1 1365 aaKnown RBP21.13■□□□□ 0.97
Cldn18-202ENSMUST00000112882 Golga3P55937 1487 aa21.12■□□□□ 0.97
Cldn18-202ENSMUST00000112882 Shroom2A2ALU4 1481 aa21.1■□□□□ 0.97
Cldn18-202ENSMUST00000112882 Plb1Q3TTY0 1478 aa21.1■□□□□ 0.97
Cldn18-202ENSMUST00000112882 Ccdc18Q640L5 1455 aa21.07■□□□□ 0.96
Cldn18-202ENSMUST00000112882 Camsap1A2AHC3 1581 aa21.07■□□□□ 0.96
Cldn18-202ENSMUST00000112882 LrpprcQ6PB66 1392 aaKnown RBP21.06■□□□□ 0.96
Cldn18-202ENSMUST00000112882 Crocc2F6XLV1 1638 aa20.99■□□□□ 0.95
Cldn18-202ENSMUST00000112882 Il27Q8K3I6 234 aa20.99■□□□□ 0.95
Cldn18-202ENSMUST00000112882 PogzQ8BZH4 1409 aaKnown RBP20.94■□□□□ 0.94
Cldn18-202ENSMUST00000112882 Fmn1Q05860 1466 aa20.91■□□□□ 0.94
Cldn18-202ENSMUST00000112882 Cngb1E1AZ71 1325 aa20.9■□□□□ 0.94
Cldn18-202ENSMUST00000112882 Ift140E9PY46 1464 aa20.88■□□□□ 0.93
Cldn18-202ENSMUST00000112882 Rusc2Q80U22 1514 aa20.86■□□□□ 0.93
Cldn18-202ENSMUST00000112882 Col17a1Q07563 1470 aa20.84■□□□□ 0.93
Cldn18-202ENSMUST00000112882 Duox2A2AQ99 1517 aa20.83■□□□□ 0.92
Cldn18-202ENSMUST00000112882 Grin2bQ01097 1482 aa20.77■□□□□ 0.92
Cldn18-202ENSMUST00000112882 Disp1Q3TDN0 1521 aa20.77■□□□□ 0.92
Cldn18-202ENSMUST00000112882 Pabpn1Q8CCS6 302 aaKnown RBP20.76■□□□□ 0.91
Cldn18-202ENSMUST00000112882 Samd9lQ69Z37 1561 aa20.68■□□□□ 0.9
Cldn18-202ENSMUST00000112882 Nup160Q9Z0W3 1402 aaKnown RBP20.68■□□□□ 0.9
Cldn18-202ENSMUST00000112882 Setd1bQ8CFT2 1985 aa20.65■□□□□ 0.9
Cldn18-202ENSMUST00000112882 Efcab5A0JP43 1406 aa20.64■□□□□ 0.89
Cldn18-202ENSMUST00000112882 Pbrm1Q8BSQ9 1634 aaKnown RBP20.61■□□□□ 0.89
Cldn18-202ENSMUST00000112882 Cc2d2bA0A286YDU8 1405 aa20.6■□□□□ 0.89
Cldn18-202ENSMUST00000112882 Zcchc11B2RX14 1644 aaKnown RBP20.57■□□□□ 0.88
Cldn18-202ENSMUST00000112882 Ccdc88bQ4QRL3 1481 aa20.55■□□□□ 0.88
Cldn18-202ENSMUST00000112882 Pelp1Q9DBD5 1123 aaKnown RBP20.55■□□□□ 0.88
Cldn18-202ENSMUST00000112882 Rad54l2Q99NG0 1466 aa20.53■□□□□ 0.88
Cldn18-202ENSMUST00000112882 Magi3Q9EQJ9 1476 aa20.52■□□□□ 0.88
Cldn18-202ENSMUST00000112882 Top2aQ01320 1528 aaKnown RBP20.5■□□□□ 0.87
Cldn18-202ENSMUST00000112882 NrkQ9R0G8 1455 aa20.5■□□□□ 0.87
Cldn18-202ENSMUST00000112882 Grin2aP35436 1464 aa20.49■□□□□ 0.87
Cldn18-202ENSMUST00000112882 AqrQ8CFQ3 1481 aaKnown RBP20.46■□□□□ 0.87
Cldn18-202ENSMUST00000112882 Gpatch8A2A6A1 1505 aa20.44■□□□□ 0.86
Cldn18-202ENSMUST00000112882 PtprkP35822 1457 aa20.42■□□□□ 0.86
Cldn18-202ENSMUST00000112882 Fgd6Q69ZL1 1399 aa20.4■□□□□ 0.86
Cldn18-202ENSMUST00000112882 Shroom4Q1W617 1475 aa20.38■□□□□ 0.85
Cldn18-202ENSMUST00000112882 Pla2r1Q62028 1487 aa20.37■□□□□ 0.85
Cldn18-202ENSMUST00000112882 Chic1Q8CBW7 227 aa20.35■□□□□ 0.85
Cldn18-202ENSMUST00000112882 Adgrl3Q80TS3 1537 aa20.33■□□□□ 0.84
Cldn18-202ENSMUST00000112882 SynmQ70IV5 1561 aa20.32■□□□□ 0.84
Cldn18-202ENSMUST00000112882 Cep170Q6A065 1588 aa20.31■□□□□ 0.84
Cldn18-202ENSMUST00000112882 Gapvd1Q6PAR5 1458 aa20.3■□□□□ 0.84
Cldn18-202ENSMUST00000112882 Gm156Q58A37 223 aa20.24■□□□□ 0.83
Retrieved 100 of 22,080 RNA–protein pairs in 79.9 ms