RNA–Protein interactions for RNA: ENSMUST00000109549.2

Samhd1-203, Transcript of Deoxynucleoside triphosphate triphosphohydrolase SAMHD1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Samhd1, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Samhd1-203ENSMUST00000109549 Gm35339A0A140LHH9 1649 aa24.78■■□□□ 1.56
Samhd1-203ENSMUST00000109549 NischQ80TM9 1593 aa24.07■■□□□ 1.44
Samhd1-203ENSMUST00000109549 Abcc9P70170 1546 aa23.51■■□□□ 1.35
Samhd1-203ENSMUST00000109549 Abcc8B2RUS7 1588 aa23.28■■□□□ 1.32
Samhd1-203ENSMUST00000109549 ScribQ80U72 1612 aa22.22■■□□□ 1.15
Samhd1-203ENSMUST00000109549 Dcaf1Q80TR8 1506 aa21.9■■□□□ 1.1
Samhd1-203ENSMUST00000109549 NacadQ5SWP3 1504 aa21.6■■□□□ 1.05
Samhd1-203ENSMUST00000109549 Kdm5dQ62240 1548 aa21.49■■□□□ 1.03
Samhd1-203ENSMUST00000109549 Ccdc180J3QNE4 1664 aa21.46■■□□□ 1.03
Samhd1-203ENSMUST00000109549 Sycp2Q9CUU3 1500 aa21.15■□□□□ 0.98
Samhd1-203ENSMUST00000109549 Crybg2B7ZCC2 1516 aa21.02■□□□□ 0.96
Samhd1-203ENSMUST00000109549 Rb1cc1Q9ESK9 1588 aa21■□□□□ 0.95
Samhd1-203ENSMUST00000109549 Baz1aO88379 1555 aa20.86■□□□□ 0.93
Samhd1-203ENSMUST00000109549 Rtl1Q7M732 1744 aa20.82■□□□□ 0.92
Samhd1-203ENSMUST00000109549 BicraF8VPZ9 1578 aa20.75■□□□□ 0.91
Samhd1-203ENSMUST00000109549 Smarca2Q6DIC0 1577 aa20.32■□□□□ 0.84
Samhd1-203ENSMUST00000109549 Rhox8Q6VSS7 320 aa20.31■□□□□ 0.84
Samhd1-203ENSMUST00000109549 Pds5bQ4VA53 1446 aaKnown RBP20.11■□□□□ 0.81
Samhd1-203ENSMUST00000109549 Zcchc6Q5BLK4 1491 aaKnown RBP20.02■□□□□ 0.8
Samhd1-203ENSMUST00000109549 Smarca4Q3TKT4 1613 aaKnown RBP20■□□□□ 0.79
Samhd1-203ENSMUST00000109549 Atad2bE9Q166 1460 aaKnown RBP20■□□□□ 0.79
Samhd1-203ENSMUST00000109549 Thoc2B1AZI6 1594 aaKnown RBP19.94■□□□□ 0.78
Samhd1-203ENSMUST00000109549 Baz1bQ9Z277 1479 aa19.8■□□□□ 0.76
Samhd1-203ENSMUST00000109549 Iqgap2Q3UQ44 1575 aa19.77■□□□□ 0.76
Samhd1-203ENSMUST00000109549 Cecr2E9Q2Z1 1453 aa19.74■□□□□ 0.75
Samhd1-203ENSMUST00000109549 Cttnbp2B9EJA2 1648 aa19.7■□□□□ 0.74
Samhd1-203ENSMUST00000109549 Wdr62Q3U3T8 1523 aa19.62■□□□□ 0.73
Samhd1-203ENSMUST00000109549 Brd4Q9ESU6 1400 aaKnown RBP19.6■□□□□ 0.73
Samhd1-203ENSMUST00000109549 Ercc6F8VPZ5 1481 aa19.6■□□□□ 0.73
Samhd1-203ENSMUST00000109549 Fam135aQ6NS59 1506 aa19.58■□□□□ 0.73
Samhd1-203ENSMUST00000109549 CftrP26361 1476 aa19.54■□□□□ 0.72
Samhd1-203ENSMUST00000109549 Synj1Q8CHC4 1574 aa19.5■□□□□ 0.71
Samhd1-203ENSMUST00000109549 Frmpd1A2AKB4 1549 aa19.46■□□□□ 0.71
Samhd1-203ENSMUST00000109549 Unc13aQ4KUS2 1712 aa19.39■□□□□ 0.7
Samhd1-203ENSMUST00000109549 Cc2d2aQ8CFW7 1633 aa19.38■□□□□ 0.69
Samhd1-203ENSMUST00000109549 Phldb1Q6PDH0 1371 aaKnown RBP19.27■□□□□ 0.68
Samhd1-203ENSMUST00000109549 Top2bQ64511 1612 aa19.18■□□□□ 0.66
Samhd1-203ENSMUST00000109549 Trim41Q5NCC3 630 aa19.14■□□□□ 0.66
Samhd1-203ENSMUST00000109549 Lamc3Q9R0B6 1581 aa19.08■□□□□ 0.64
Samhd1-203ENSMUST00000109549 TnnQ80Z71 1560 aa19.07■□□□□ 0.64
Samhd1-203ENSMUST00000109549 Rpgrip1Q9EPQ2 1331 aa19.06■□□□□ 0.64
Samhd1-203ENSMUST00000109549 Golga3P55937 1487 aa19■□□□□ 0.63
Samhd1-203ENSMUST00000109549 Dnajc5bQ9CQ94 199 aa18.99■□□□□ 0.63
Samhd1-203ENSMUST00000109549 Ccdc136Q3TVA9 1136 aa18.91■□□□□ 0.62
Samhd1-203ENSMUST00000109549 Mrc2Q64449 1479 aa18.89■□□□□ 0.62
Samhd1-203ENSMUST00000109549 Rsf1E9PWW9 1441 aaKnown RBP18.86■□□□□ 0.61
Samhd1-203ENSMUST00000109549 Fmn1Q05860 1466 aa18.81■□□□□ 0.6
Samhd1-203ENSMUST00000109549 HrcG5E8J6 738 aa18.79■□□□□ 0.6
Samhd1-203ENSMUST00000109549 Ubl4bQ9CQ84 188 aa18.68■□□□□ 0.58
Samhd1-203ENSMUST00000109549 Camsap1A2AHC3 1581 aa18.66■□□□□ 0.58
Samhd1-203ENSMUST00000109549 Kif15Q6P9L6 1387 aa18.63■□□□□ 0.57
Samhd1-203ENSMUST00000109549 Cux2P70298 1426 aa18.61■□□□□ 0.57
Samhd1-203ENSMUST00000109549 Esf1Q3V1V3 845 aaKnown RBP18.6■□□□□ 0.57
Samhd1-203ENSMUST00000109549 Kif21aQ9QXL2 1672 aa18.57■□□□□ 0.56
Samhd1-203ENSMUST00000109549 Top2aQ01320 1528 aaKnown RBP18.56■□□□□ 0.56
Samhd1-203ENSMUST00000109549 Ccdc18Q640L5 1455 aa18.55■□□□□ 0.56
Samhd1-203ENSMUST00000109549 Gpatch8A2A6A1 1505 aa18.52■□□□□ 0.56
Samhd1-203ENSMUST00000109549 Cep164Q5DU05 1446 aa18.51■□□□□ 0.55
Samhd1-203ENSMUST00000109549 Lrriq1Q0P5X1 1673 aa18.49■□□□□ 0.55
Samhd1-203ENSMUST00000109549 Acin1Q9JIX8 1338 aaKnown RBP18.44■□□□□ 0.54
Samhd1-203ENSMUST00000109549 NrkQ9R0G8 1455 aa18.4■□□□□ 0.54
Samhd1-203ENSMUST00000109549 Pbrm1Q8BSQ9 1634 aaKnown RBP18.39■□□□□ 0.54
Samhd1-203ENSMUST00000109549 Eif4g3Q80XI3 1579 aaKnown RBP18.39■□□□□ 0.53
Samhd1-203ENSMUST00000109549 Grin2bQ01097 1482 aa18.38■□□□□ 0.53
Samhd1-203ENSMUST00000109549 Crocc2F6XLV1 1638 aa18.38■□□□□ 0.53
Samhd1-203ENSMUST00000109549 PogzQ8BZH4 1409 aaKnown RBP18.37■□□□□ 0.53
Samhd1-203ENSMUST00000109549 LrpprcQ6PB66 1392 aaKnown RBP18.35■□□□□ 0.53
Samhd1-203ENSMUST00000109549 Ccdc88bQ4QRL3 1481 aa18.34■□□□□ 0.53
Samhd1-203ENSMUST00000109549 Efcab5A0JP43 1406 aa18.29■□□□□ 0.52
Samhd1-203ENSMUST00000109549 Cngb1E1AZ71 1325 aa18.26■□□□□ 0.51
Samhd1-203ENSMUST00000109549 Dhx29Q6PGC1 1365 aaKnown RBP18.25■□□□□ 0.51
Samhd1-203ENSMUST00000109549 Ift140E9PY46 1464 aa18.24■□□□□ 0.51
Samhd1-203ENSMUST00000109549 Npm1Q61937 292 aaKnown RBP18.24■□□□□ 0.51
Samhd1-203ENSMUST00000109549 Urb2E9Q7L1 1524 aaKnown RBP18.24■□□□□ 0.51
Samhd1-203ENSMUST00000109549 Shroom4Q1W617 1475 aa18.22■□□□□ 0.51
Samhd1-203ENSMUST00000109549 Duox2A2AQ99 1517 aa18.21■□□□□ 0.51
Samhd1-203ENSMUST00000109549 Eif4g1Q6NZJ6 1600 aaKnown RBP18.16■□□□□ 0.5
Samhd1-203ENSMUST00000109549 Samd9lQ69Z37 1561 aa18.13■□□□□ 0.49
Samhd1-203ENSMUST00000109549 Plb1Q3TTY0 1478 aa18.12■□□□□ 0.49
Samhd1-203ENSMUST00000109549 Rusc2Q80U22 1514 aa18.12■□□□□ 0.49
Samhd1-203ENSMUST00000109549 Map3k1P53349 1493 aa18.1■□□□□ 0.49
Samhd1-203ENSMUST00000109549 Nup160Q9Z0W3 1402 aaKnown RBP18.08■□□□□ 0.48
Samhd1-203ENSMUST00000109549 Rapgef2Q8CHG7 1496 aa18.07■□□□□ 0.48
Samhd1-203ENSMUST00000109549 Setd1bQ8CFT2 1985 aa18.06■□□□□ 0.48
Samhd1-203ENSMUST00000109549 AqrQ8CFQ3 1481 aaKnown RBP18.06■□□□□ 0.48
Samhd1-203ENSMUST00000109549 SynmQ70IV5 1561 aa18.05■□□□□ 0.48
Samhd1-203ENSMUST00000109549 Disp1Q3TDN0 1521 aa18.04■□□□□ 0.48
Samhd1-203ENSMUST00000109549 Cc2d2bA0A286YDU8 1405 aa18.01■□□□□ 0.47
Samhd1-203ENSMUST00000109549 Chic1Q8CBW7 227 aa18■□□□□ 0.47
Samhd1-203ENSMUST00000109549 Magi3Q9EQJ9 1476 aa17.98■□□□□ 0.47
Samhd1-203ENSMUST00000109549 Mroh2bQ7M6Y6 1581 aa17.98■□□□□ 0.47
Samhd1-203ENSMUST00000109549 PtprkP35822 1457 aa17.96■□□□□ 0.47
Samhd1-203ENSMUST00000109549 EprsQ8CGC7 1512 aaKnown RBP17.95■□□□□ 0.46
Samhd1-203ENSMUST00000109549 Shroom2A2ALU4 1481 aa17.93■□□□□ 0.46
Samhd1-203ENSMUST00000109549 Grin2aP35436 1464 aa17.91■□□□□ 0.46
Samhd1-203ENSMUST00000109549 Polr1aO35134 1717 aaKnown RBP17.9■□□□□ 0.46
Samhd1-203ENSMUST00000109549 Adamts12Q811B3 1600 aa17.89■□□□□ 0.45
Samhd1-203ENSMUST00000109549 Pla2r1Q62028 1487 aa17.88■□□□□ 0.45
Samhd1-203ENSMUST00000109549 Arhgap35Q91YM2 1499 aa17.85■□□□□ 0.45
Samhd1-203ENSMUST00000109549 Rpap1Q80TE0 1409 aa17.81■□□□□ 0.44
Retrieved 100 of 22,080 RNA–protein pairs in 46.1 ms