RNA–Protein interactions for RNA: ENSMUST00000108455.7

Trappc6a-202, Transcript of Trafficking protein particle complex subunit 6A, mousemouse

TSL 1 (best) BASIC

Gene Trappc6a, Length 651 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc6a-202ENSMUST00000108455 Gm35339A0A140LHH9 1649 aa36.9■■■■□ 3.5
Trappc6a-202ENSMUST00000108455 NischQ80TM9 1593 aa35.87■■■■□ 3.33
Trappc6a-202ENSMUST00000108455 Abcc9P70170 1546 aa35.6■■■■□ 3.29
Trappc6a-202ENSMUST00000108455 Abcc8B2RUS7 1588 aa35.04■■■■□ 3.2
Trappc6a-202ENSMUST00000108455 ScribQ80U72 1612 aa34.52■■■■□ 3.12
Trappc6a-202ENSMUST00000108455 Dnajc5bQ9CQ94 199 aa33.39■■■□□ 2.94
Trappc6a-202ENSMUST00000108455 NacadQ5SWP3 1504 aa33.26■■■□□ 2.91
Trappc6a-202ENSMUST00000108455 Kdm5dQ62240 1548 aa33.07■■■□□ 2.88
Trappc6a-202ENSMUST00000108455 Sycp2Q9CUU3 1500 aa32.67■■■□□ 2.82
Trappc6a-202ENSMUST00000108455 BicraF8VPZ9 1578 aa32.45■■■□□ 2.79
Trappc6a-202ENSMUST00000108455 Dcaf1Q80TR8 1506 aa32.01■■■□□ 2.72
Trappc6a-202ENSMUST00000108455 Thoc2B1AZI6 1594 aaKnown RBP31.96■■■□□ 2.71
Trappc6a-202ENSMUST00000108455 Pds5bQ4VA53 1446 aaKnown RBP31.76■■■□□ 2.68
Trappc6a-202ENSMUST00000108455 Dnajc5P60904 198 aa31.44■■■□□ 2.62
Trappc6a-202ENSMUST00000108455 Cc2d2aQ8CFW7 1633 aa31.38■■■□□ 2.61
Trappc6a-202ENSMUST00000108455 Atad2bE9Q166 1460 aaKnown RBP31.21■■■□□ 2.59
Trappc6a-202ENSMUST00000108455 Rb1cc1Q9ESK9 1588 aa31.13■■■□□ 2.57
Trappc6a-202ENSMUST00000108455 Ercc6F8VPZ5 1481 aa31.01■■■□□ 2.55
Trappc6a-202ENSMUST00000108455 Fam135aQ6NS59 1506 aa30.98■■■□□ 2.55
Trappc6a-202ENSMUST00000108455 Crybg2B7ZCC2 1516 aa30.74■■■□□ 2.51
Trappc6a-202ENSMUST00000108455 Smarca2Q6DIC0 1577 aa30.71■■■□□ 2.51
Trappc6a-202ENSMUST00000108455 Baz1bQ9Z277 1479 aa30.62■■■□□ 2.49
Trappc6a-202ENSMUST00000108455 Baz1aO88379 1555 aa30.62■■■□□ 2.49
Trappc6a-202ENSMUST00000108455 Trim41Q5NCC3 630 aa30.59■■■□□ 2.49
Trappc6a-202ENSMUST00000108455 Phldb1Q6PDH0 1371 aaKnown RBP30.51■■■□□ 2.47
Trappc6a-202ENSMUST00000108455 Iqgap2Q3UQ44 1575 aa30.48■■■□□ 2.47
Trappc6a-202ENSMUST00000108455 Ccdc180J3QNE4 1664 aa30.47■■■□□ 2.47
Trappc6a-202ENSMUST00000108455 Smarca4Q3TKT4 1613 aaKnown RBP30.47■■■□□ 2.47
Trappc6a-202ENSMUST00000108455 Wdr62Q3U3T8 1523 aa30.42■■■□□ 2.46
Trappc6a-202ENSMUST00000108455 Frmpd1A2AKB4 1549 aa30.39■■■□□ 2.46
Trappc6a-202ENSMUST00000108455 Zcchc6Q5BLK4 1491 aaKnown RBP30.36■■■□□ 2.45
Trappc6a-202ENSMUST00000108455 Ubl4bQ9CQ84 188 aa30.29■■■□□ 2.44
Trappc6a-202ENSMUST00000108455 Mrc2Q64449 1479 aa30.25■■■□□ 2.43
Trappc6a-202ENSMUST00000108455 Cecr2E9Q2Z1 1453 aa30.04■■■□□ 2.4
Trappc6a-202ENSMUST00000108455 Unc13aQ4KUS2 1712 aa29.94■■■□□ 2.38
Trappc6a-202ENSMUST00000108455 Rhox8Q6VSS7 320 aa29.73■■■□□ 2.35
Trappc6a-202ENSMUST00000108455 Lrriq1Q0P5X1 1673 aa29.69■■■□□ 2.34
Trappc6a-202ENSMUST00000108455 Shroom2A2ALU4 1481 aa29.61■■■□□ 2.33
Trappc6a-202ENSMUST00000108455 Rsf1E9PWW9 1441 aaKnown RBP29.61■■■□□ 2.33
Trappc6a-202ENSMUST00000108455 Col17a1Q07563 1470 aa29.46■■■□□ 2.31
Trappc6a-202ENSMUST00000108455 Eif4g3Q80XI3 1579 aaKnown RBP29.23■■■□□ 2.27
Trappc6a-202ENSMUST00000108455 Kif21aQ9QXL2 1672 aa29.19■■■□□ 2.26
Trappc6a-202ENSMUST00000108455 Cux2P70298 1426 aa29.14■■■□□ 2.26
Trappc6a-202ENSMUST00000108455 CftrP26361 1476 aa29.13■■■□□ 2.25
Trappc6a-202ENSMUST00000108455 Cttnbp2B9EJA2 1648 aa29.09■■■□□ 2.25
Trappc6a-202ENSMUST00000108455 Pabpn1Q8CCS6 302 aaKnown RBP29.08■■■□□ 2.25
Trappc6a-202ENSMUST00000108455 Top2bQ64511 1612 aa29.04■■■□□ 2.24
Trappc6a-202ENSMUST00000108455 Synj1Q8CHC4 1574 aa28.91■■■□□ 2.22
Trappc6a-202ENSMUST00000108455 Kif15Q6P9L6 1387 aa28.88■■■□□ 2.21
Trappc6a-202ENSMUST00000108455 Zcchc11B2RX14 1644 aaKnown RBP28.83■■■□□ 2.21
Trappc6a-202ENSMUST00000108455 Pcdh10E9PXQ7 1057 aa28.75■■■□□ 2.19
Trappc6a-202ENSMUST00000108455 Npm1Q61937 292 aaKnown RBP28.75■■■□□ 2.19
Trappc6a-202ENSMUST00000108455 Pelp1Q9DBD5 1123 aaKnown RBP28.7■■■□□ 2.18
Trappc6a-202ENSMUST00000108455 Urb2E9Q7L1 1524 aaKnown RBP28.69■■■□□ 2.18
Trappc6a-202ENSMUST00000108455 Brd4Q9ESU6 1400 aaKnown RBP28.68■■■□□ 2.18
Trappc6a-202ENSMUST00000108455 Plb1Q3TTY0 1478 aa28.66■■■□□ 2.18
Trappc6a-202ENSMUST00000108455 Cep164Q5DU05 1446 aa28.55■■■□□ 2.16
Trappc6a-202ENSMUST00000108455 Lamc3Q9R0B6 1581 aa28.54■■■□□ 2.16
Trappc6a-202ENSMUST00000108455 Arhgef5E9Q7D5 1581 aa28.5■■■□□ 2.15
Trappc6a-202ENSMUST00000108455 Esf1Q3V1V3 845 aaKnown RBP28.5■■■□□ 2.15
Trappc6a-202ENSMUST00000108455 Dhx29Q6PGC1 1365 aaKnown RBP28.44■■■□□ 2.14
Trappc6a-202ENSMUST00000108455 Rusc2Q80U22 1514 aa28.4■■■□□ 2.14
Trappc6a-202ENSMUST00000108455 Crocc2F6XLV1 1638 aa28.28■■■□□ 2.12
Trappc6a-202ENSMUST00000108455 Adgrl3Q80TS3 1537 aa28.28■■■□□ 2.12
Trappc6a-202ENSMUST00000108455 Ift140E9PY46 1464 aa28.26■■■□□ 2.11
Trappc6a-202ENSMUST00000108455 Ttbk1Q6PCN3 1308 aa28.22■■■□□ 2.11
Trappc6a-202ENSMUST00000108455 LrpprcQ6PB66 1392 aaKnown RBP28.2■■■□□ 2.1
Trappc6a-202ENSMUST00000108455 Ccdc18Q640L5 1455 aa28.12■■■□□ 2.09
Trappc6a-202ENSMUST00000108455 Il27Q8K3I6 234 aa28.11■■■□□ 2.09
Trappc6a-202ENSMUST00000108455 Ccdc136Q3TVA9 1136 aa28.09■■■□□ 2.09
Trappc6a-202ENSMUST00000108455 PtprtQ99M80 1454 aa28.08■■■□□ 2.09
Trappc6a-202ENSMUST00000108455 PtprkP35822 1457 aa28.07■■■□□ 2.08
Trappc6a-202ENSMUST00000108455 Gm156Q58A37 223 aa28.06■■■□□ 2.08
Trappc6a-202ENSMUST00000108455 Rtl1Q7M732 1744 aa28.06■■■□□ 2.08
Trappc6a-202ENSMUST00000108455 Cep170Q6A065 1588 aa28.01■■■□□ 2.07
Trappc6a-202ENSMUST00000108455 PogzQ8BZH4 1409 aaKnown RBP27.92■■■□□ 2.06
Trappc6a-202ENSMUST00000108455 Gapvd1Q6PAR5 1458 aa27.92■■■□□ 2.06
Trappc6a-202ENSMUST00000108455 Disp1Q3TDN0 1521 aa27.89■■■□□ 2.06
Trappc6a-202ENSMUST00000108455 Camsap1A2AHC3 1581 aa27.89■■■□□ 2.05
Trappc6a-202ENSMUST00000108455 Setd1bQ8CFT2 1985 aa27.86■■■□□ 2.05
Trappc6a-202ENSMUST00000108455 TnnQ80Z71 1560 aa27.86■■■□□ 2.05
Trappc6a-202ENSMUST00000108455 Cc2d2bA0A286YDU8 1405 aa27.83■■■□□ 2.05
Trappc6a-202ENSMUST00000108455 Nup160Q9Z0W3 1402 aaKnown RBP27.8■■■□□ 2.04
Trappc6a-202ENSMUST00000108455 Golga3P55937 1487 aa27.79■■■□□ 2.04
Trappc6a-202ENSMUST00000108455 Duox2A2AQ99 1517 aa27.77■■■□□ 2.04
Trappc6a-202ENSMUST00000108455 Pprc1Q6NZN1 1644 aa27.76■■■□□ 2.03
Trappc6a-202ENSMUST00000108455 Plekhg3Q4VAC9 1341 aa27.73■■■□□ 2.03
Trappc6a-202ENSMUST00000108455 Fgd6Q69ZL1 1399 aa27.73■■■□□ 2.03
Trappc6a-202ENSMUST00000108455 Pbrm1Q8BSQ9 1634 aaKnown RBP27.72■■■□□ 2.03
Trappc6a-202ENSMUST00000108455 Rapgef2Q8CHG7 1496 aa27.57■■■□□ 2
Trappc6a-202ENSMUST00000108455 Ythdc2B2RR83 1445 aaKnown RBP27.56■■■□□ 2
Trappc6a-202ENSMUST00000108455 AqrQ8CFQ3 1481 aaKnown RBP27.54■■■□□ 2
Trappc6a-202ENSMUST00000108455 Abcc1O35379 1528 aa27.52■■■□□ 2
Trappc6a-202ENSMUST00000108455 Samd9lQ69Z37 1561 aa27.52■■■□□ 2
Trappc6a-202ENSMUST00000108455 Setbp1Q9Z180 1582 aa27.47■■□□□ 1.99
Trappc6a-202ENSMUST00000108455 AknaQ80VW7 1404 aa27.46■■□□□ 1.99
Trappc6a-202ENSMUST00000108455 Ppp1r18Q8BQ30 594 aa27.42■■□□□ 1.98
Trappc6a-202ENSMUST00000108455 Grin2bQ01097 1482 aa27.4■■□□□ 1.98
Trappc6a-202ENSMUST00000108455 Grin2aP35436 1464 aa27.39■■□□□ 1.98
Trappc6a-202ENSMUST00000108455 Chd1P40201 1711 aa27.38■■□□□ 1.97
Retrieved 100 of 22,080 RNA–protein pairs in 52.5 ms