RNA–Protein interactions for RNA: ENSMUST00000108374.7

Sdcbp-204, Transcript of Syntenin-1, mousemouse

TSL 1 (best) BASIC

Gene Sdcbp, Length 1,803 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdcbp-204ENSMUST00000108374 Gm35339A0A140LHH9 1649 aa22.83■■□□□ 1.24
Sdcbp-204ENSMUST00000108374 Abcc9P70170 1546 aa22.4■■□□□ 1.18
Sdcbp-204ENSMUST00000108374 NischQ80TM9 1593 aa21.86■■□□□ 1.09
Sdcbp-204ENSMUST00000108374 ScribQ80U72 1612 aa21.58■■□□□ 1.04
Sdcbp-204ENSMUST00000108374 Abcc8B2RUS7 1588 aa21.53■■□□□ 1.04
Sdcbp-204ENSMUST00000108374 Dnajc5bQ9CQ94 199 aa21.47■■□□□ 1.03
Sdcbp-204ENSMUST00000108374 Dnajc5P60904 198 aa20.65■□□□□ 0.9
Sdcbp-204ENSMUST00000108374 NacadQ5SWP3 1504 aa20.62■□□□□ 0.89
Sdcbp-204ENSMUST00000108374 Kdm5dQ62240 1548 aa20.51■□□□□ 0.87
Sdcbp-204ENSMUST00000108374 Sycp2Q9CUU3 1500 aa20.3■□□□□ 0.84
Sdcbp-204ENSMUST00000108374 Thoc2B1AZI6 1594 aaKnown RBP20.29■□□□□ 0.84
Sdcbp-204ENSMUST00000108374 BicraF8VPZ9 1578 aa20.28■□□□□ 0.84
Sdcbp-204ENSMUST00000108374 Pds5bQ4VA53 1446 aaKnown RBP19.87■□□□□ 0.77
Sdcbp-204ENSMUST00000108374 Cc2d2aQ8CFW7 1633 aa19.84■□□□□ 0.77
Sdcbp-204ENSMUST00000108374 Trim41Q5NCC3 630 aa19.68■□□□□ 0.74
Sdcbp-204ENSMUST00000108374 Dcaf1Q80TR8 1506 aa19.64■□□□□ 0.73
Sdcbp-204ENSMUST00000108374 Fam135aQ6NS59 1506 aa19.54■□□□□ 0.72
Sdcbp-204ENSMUST00000108374 Atad2bE9Q166 1460 aaKnown RBP19.44■□□□□ 0.7
Sdcbp-204ENSMUST00000108374 Ercc6F8VPZ5 1481 aa19.4■□□□□ 0.7
Sdcbp-204ENSMUST00000108374 Baz1bQ9Z277 1479 aa19.26■□□□□ 0.67
Sdcbp-204ENSMUST00000108374 Smarca2Q6DIC0 1577 aa19.09■□□□□ 0.65
Sdcbp-204ENSMUST00000108374 Rb1cc1Q9ESK9 1588 aa19.07■□□□□ 0.64
Sdcbp-204ENSMUST00000108374 Phldb1Q6PDH0 1371 aaKnown RBP19.03■□□□□ 0.64
Sdcbp-204ENSMUST00000108374 Mrc2Q64449 1479 aa19.02■□□□□ 0.63
Sdcbp-204ENSMUST00000108374 Wdr62Q3U3T8 1523 aa18.96■□□□□ 0.63
Sdcbp-204ENSMUST00000108374 Shroom2A2ALU4 1481 aa18.95■□□□□ 0.62
Sdcbp-204ENSMUST00000108374 Col17a1Q07563 1470 aa18.93■□□□□ 0.62
Sdcbp-204ENSMUST00000108374 Frmpd1A2AKB4 1549 aa18.91■□□□□ 0.62
Sdcbp-204ENSMUST00000108374 Iqgap2Q3UQ44 1575 aa18.91■□□□□ 0.62
Sdcbp-204ENSMUST00000108374 Ubl4bQ9CQ84 188 aa18.84■□□□□ 0.61
Sdcbp-204ENSMUST00000108374 Smarca4Q3TKT4 1613 aaKnown RBP18.82■□□□□ 0.6
Sdcbp-204ENSMUST00000108374 Lrriq1Q0P5X1 1673 aa18.75■□□□□ 0.59
Sdcbp-204ENSMUST00000108374 Crybg2B7ZCC2 1516 aa18.7■□□□□ 0.58
Sdcbp-204ENSMUST00000108374 Unc13aQ4KUS2 1712 aa18.69■□□□□ 0.58
Sdcbp-204ENSMUST00000108374 Rsf1E9PWW9 1441 aaKnown RBP18.68■□□□□ 0.58
Sdcbp-204ENSMUST00000108374 Baz1aO88379 1555 aa18.6■□□□□ 0.57
Sdcbp-204ENSMUST00000108374 Pcdh10E9PXQ7 1057 aa18.51■□□□□ 0.55
Sdcbp-204ENSMUST00000108374 Zcchc6Q5BLK4 1491 aaKnown RBP18.48■□□□□ 0.55
Sdcbp-204ENSMUST00000108374 Top2bQ64511 1612 aa18.48■□□□□ 0.55
Sdcbp-204ENSMUST00000108374 Eif4g3Q80XI3 1579 aaKnown RBP18.48■□□□□ 0.55
Sdcbp-204ENSMUST00000108374 Ccdc180J3QNE4 1664 aa18.47■□□□□ 0.55
Sdcbp-204ENSMUST00000108374 Zcchc11B2RX14 1644 aaKnown RBP18.41■□□□□ 0.54
Sdcbp-204ENSMUST00000108374 Cecr2E9Q2Z1 1453 aa18.39■□□□□ 0.53
Sdcbp-204ENSMUST00000108374 Pabpn1Q8CCS6 302 aaKnown RBP18.39■□□□□ 0.53
Sdcbp-204ENSMUST00000108374 Arhgef5E9Q7D5 1581 aa18.31■□□□□ 0.52
Sdcbp-204ENSMUST00000108374 Kif21aQ9QXL2 1672 aa18.26■□□□□ 0.51
Sdcbp-204ENSMUST00000108374 Cypt1Q8CH20 168 aa18.12■□□□□ 0.49
Sdcbp-204ENSMUST00000108374 Pelp1Q9DBD5 1123 aaKnown RBP18.09■□□□□ 0.49
Sdcbp-204ENSMUST00000108374 Cux2P70298 1426 aa18.03■□□□□ 0.48
Sdcbp-204ENSMUST00000108374 Plb1Q3TTY0 1478 aa17.94■□□□□ 0.46
Sdcbp-204ENSMUST00000108374 Adgrl3Q80TS3 1537 aa17.93■□□□□ 0.46
Sdcbp-204ENSMUST00000108374 Urb2E9Q7L1 1524 aaKnown RBP17.89■□□□□ 0.45
Sdcbp-204ENSMUST00000108374 Ttbk1Q6PCN3 1308 aa17.89■□□□□ 0.45
Sdcbp-204ENSMUST00000108374 Plekhg3Q4VAC9 1341 aa17.83■□□□□ 0.44
Sdcbp-204ENSMUST00000108374 PtprtQ99M80 1454 aa17.82■□□□□ 0.44
Sdcbp-204ENSMUST00000108374 Rusc2Q80U22 1514 aa17.8■□□□□ 0.44
Sdcbp-204ENSMUST00000108374 Cttnbp2B9EJA2 1648 aa17.77■□□□□ 0.44
Sdcbp-204ENSMUST00000108374 Kif15Q6P9L6 1387 aa17.74■□□□□ 0.43
Sdcbp-204ENSMUST00000108374 CftrP26361 1476 aa17.73■□□□□ 0.43
Sdcbp-204ENSMUST00000108374 Cep170Q6A065 1588 aa17.69■□□□□ 0.42
Sdcbp-204ENSMUST00000108374 PtprkP35822 1457 aa17.67■□□□□ 0.42
Sdcbp-204ENSMUST00000108374 Gm156Q58A37 223 aa17.65■□□□□ 0.42
Sdcbp-204ENSMUST00000108374 Npm1Q61937 292 aaKnown RBP17.65■□□□□ 0.42
Sdcbp-204ENSMUST00000108374 Pprc1Q6NZN1 1644 aa17.62■□□□□ 0.41
Sdcbp-204ENSMUST00000108374 Synj1Q8CHC4 1574 aa17.58■□□□□ 0.41
Sdcbp-204ENSMUST00000108374 Cep164Q5DU05 1446 aa17.58■□□□□ 0.4
Sdcbp-204ENSMUST00000108374 Dhx29Q6PGC1 1365 aaKnown RBP17.56■□□□□ 0.4
Sdcbp-204ENSMUST00000108374 Gapvd1Q6PAR5 1458 aa17.55■□□□□ 0.4
Sdcbp-204ENSMUST00000108374 Ift140E9PY46 1464 aa17.53■□□□□ 0.4
Sdcbp-204ENSMUST00000108374 Lamc3Q9R0B6 1581 aa17.52■□□□□ 0.4
Sdcbp-204ENSMUST00000108374 Crocc2F6XLV1 1638 aa17.51■□□□□ 0.39
Sdcbp-204ENSMUST00000108374 Rhox8Q6VSS7 320 aa17.46■□□□□ 0.39
Sdcbp-204ENSMUST00000108374 Alpk3Q924C5 1678 aa17.4■□□□□ 0.38
Sdcbp-204ENSMUST00000108374 Fbxo41Q6NS60 873 aa17.39■□□□□ 0.37
Sdcbp-204ENSMUST00000108374 Rapgef2Q8CHG7 1496 aa17.33■□□□□ 0.37
Sdcbp-204ENSMUST00000108374 Setbp1Q9Z180 1582 aa17.31■□□□□ 0.36
Sdcbp-204ENSMUST00000108374 LrpprcQ6PB66 1392 aaKnown RBP17.31■□□□□ 0.36
Sdcbp-204ENSMUST00000108374 Ccdc88bQ4QRL3 1481 aa17.28■□□□□ 0.36
Sdcbp-204ENSMUST00000108374 Setd1bQ8CFT2 1985 aa17.28■□□□□ 0.36
Sdcbp-204ENSMUST00000108374 Brd4Q9ESU6 1400 aaKnown RBP17.27■□□□□ 0.36
Sdcbp-204ENSMUST00000108374 Hecw2Q6I6G8 1578 aa17.24■□□□□ 0.35
Sdcbp-204ENSMUST00000108374 Disp1Q3TDN0 1521 aa17.24■□□□□ 0.35
Sdcbp-204ENSMUST00000108374 Cyb5rlB1AS42 316 aa17.24■□□□□ 0.35
Sdcbp-204ENSMUST00000108374 Ercc6l2Q9JIM3 1537 aa17.23■□□□□ 0.35
Sdcbp-204ENSMUST00000108374 Cc2d2bA0A286YDU8 1405 aa17.22■□□□□ 0.35
Sdcbp-204ENSMUST00000108374 Fgd6Q69ZL1 1399 aa17.21■□□□□ 0.35
Sdcbp-204ENSMUST00000108374 Nup160Q9Z0W3 1402 aaKnown RBP17.21■□□□□ 0.35
Sdcbp-204ENSMUST00000108374 Ythdc2B2RR83 1445 aaKnown RBP17.2■□□□□ 0.34
Sdcbp-204ENSMUST00000108374 Ppp1r18Q8BQ30 594 aa17.2■□□□□ 0.34
Sdcbp-204ENSMUST00000108374 Arhgef11Q68FM7 1552 aa17.2■□□□□ 0.34
Sdcbp-204ENSMUST00000108374 Ccdc18Q640L5 1455 aa17.19■□□□□ 0.34
Sdcbp-204ENSMUST00000108374 Pbrm1Q8BSQ9 1634 aaKnown RBP17.17■□□□□ 0.34
Sdcbp-204ENSMUST00000108374 Abcc1O35379 1528 aa17.17■□□□□ 0.34
Sdcbp-204ENSMUST00000108374 Esf1Q3V1V3 845 aaKnown RBP17.15■□□□□ 0.34
Sdcbp-204ENSMUST00000108374 Golga3P55937 1487 aa17.15■□□□□ 0.34
Sdcbp-204ENSMUST00000108374 Ak9G3UYQ4 1894 aa17.15■□□□□ 0.34
Sdcbp-204ENSMUST00000108374 Camsap1A2AHC3 1581 aa17.15■□□□□ 0.34
Sdcbp-204ENSMUST00000108374 PogzQ8BZH4 1409 aaKnown RBP17.14■□□□□ 0.33
Sdcbp-204ENSMUST00000108374 AdgbG3UZ78 1657 aa17.13■□□□□ 0.33
Sdcbp-204ENSMUST00000108374 Il27Q8K3I6 234 aa17.12■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 39.1 ms