RNA–Protein interactions for RNA: ENSMUST00000108189.8

Ccl1-202, Transcript of C-C motif chemokine 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccl1, Length 514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1-202ENSMUST00000108189 Gm35339A0A140LHH9 1649 aa26.63■■□□□ 1.85
Ccl1-202ENSMUST00000108189 NischQ80TM9 1593 aa26.41■■□□□ 1.82
Ccl1-202ENSMUST00000108189 Abcc9P70170 1546 aa25.54■■□□□ 1.68
Ccl1-202ENSMUST00000108189 Abcc8B2RUS7 1588 aa25.51■■□□□ 1.67
Ccl1-202ENSMUST00000108189 ScribQ80U72 1612 aa24.53■■□□□ 1.52
Ccl1-202ENSMUST00000108189 NacadQ5SWP3 1504 aa23.8■■□□□ 1.4
Ccl1-202ENSMUST00000108189 Kdm5dQ62240 1548 aa23.77■■□□□ 1.4
Ccl1-202ENSMUST00000108189 Dcaf1Q80TR8 1506 aa23.45■■□□□ 1.34
Ccl1-202ENSMUST00000108189 Sycp2Q9CUU3 1500 aa23.33■■□□□ 1.33
Ccl1-202ENSMUST00000108189 Rhox8Q6VSS7 320 aa23.04■■□□□ 1.28
Ccl1-202ENSMUST00000108189 Rb1cc1Q9ESK9 1588 aa23.01■■□□□ 1.27
Ccl1-202ENSMUST00000108189 BicraF8VPZ9 1578 aa22.98■■□□□ 1.27
Ccl1-202ENSMUST00000108189 Baz1aO88379 1555 aa22.69■■□□□ 1.22
Ccl1-202ENSMUST00000108189 Crybg2B7ZCC2 1516 aa22.57■■□□□ 1.2
Ccl1-202ENSMUST00000108189 Ccdc180J3QNE4 1664 aa22.57■■□□□ 1.2
Ccl1-202ENSMUST00000108189 Zcchc6Q5BLK4 1491 aaKnown RBP22.42■■□□□ 1.18
Ccl1-202ENSMUST00000108189 Pds5bQ4VA53 1446 aaKnown RBP22.37■■□□□ 1.17
Ccl1-202ENSMUST00000108189 Dnajc5bQ9CQ94 199 aa22.35■■□□□ 1.17
Ccl1-202ENSMUST00000108189 Atad2bE9Q166 1460 aaKnown RBP22.16■■□□□ 1.14
Ccl1-202ENSMUST00000108189 Thoc2B1AZI6 1594 aaKnown RBP22.09■■□□□ 1.13
Ccl1-202ENSMUST00000108189 Smarca2Q6DIC0 1577 aa22.03■■□□□ 1.12
Ccl1-202ENSMUST00000108189 Cecr2E9Q2Z1 1453 aa22■■□□□ 1.11
Ccl1-202ENSMUST00000108189 Smarca4Q3TKT4 1613 aaKnown RBP21.97■■□□□ 1.11
Ccl1-202ENSMUST00000108189 Ercc6F8VPZ5 1481 aa21.9■■□□□ 1.1
Ccl1-202ENSMUST00000108189 Iqgap2Q3UQ44 1575 aa21.85■■□□□ 1.09
Ccl1-202ENSMUST00000108189 Cc2d2aQ8CFW7 1633 aa21.77■■□□□ 1.07
Ccl1-202ENSMUST00000108189 Frmpd1A2AKB4 1549 aa21.66■■□□□ 1.06
Ccl1-202ENSMUST00000108189 Wdr62Q3U3T8 1523 aa21.66■■□□□ 1.06
Ccl1-202ENSMUST00000108189 Fam135aQ6NS59 1506 aa21.62■■□□□ 1.05
Ccl1-202ENSMUST00000108189 Rtl1Q7M732 1744 aa21.62■■□□□ 1.05
Ccl1-202ENSMUST00000108189 Ccdc136Q3TVA9 1136 aa21.55■■□□□ 1.04
Ccl1-202ENSMUST00000108189 Phldb1Q6PDH0 1371 aaKnown RBP21.54■■□□□ 1.04
Ccl1-202ENSMUST00000108189 CftrP26361 1476 aa21.49■■□□□ 1.03
Ccl1-202ENSMUST00000108189 Brd4Q9ESU6 1400 aaKnown RBP21.46■■□□□ 1.03
Ccl1-202ENSMUST00000108189 Synj1Q8CHC4 1574 aa21.44■■□□□ 1.02
Ccl1-202ENSMUST00000108189 Cttnbp2B9EJA2 1648 aa21.4■■□□□ 1.02
Ccl1-202ENSMUST00000108189 Ubl4bQ9CQ84 188 aa21.4■■□□□ 1.02
Ccl1-202ENSMUST00000108189 Baz1bQ9Z277 1479 aa21.32■■□□□ 1
Ccl1-202ENSMUST00000108189 Unc13aQ4KUS2 1712 aa21.24■□□□□ 0.99
Ccl1-202ENSMUST00000108189 Esf1Q3V1V3 845 aaKnown RBP21.22■□□□□ 0.99
Ccl1-202ENSMUST00000108189 Trim41Q5NCC3 630 aa21.18■□□□□ 0.98
Ccl1-202ENSMUST00000108189 Mrc2Q64449 1479 aa21.15■□□□□ 0.98
Ccl1-202ENSMUST00000108189 Rsf1E9PWW9 1441 aaKnown RBP20.98■□□□□ 0.95
Ccl1-202ENSMUST00000108189 Kif15Q6P9L6 1387 aa20.96■□□□□ 0.95
Ccl1-202ENSMUST00000108189 Cux2P70298 1426 aa20.92■□□□□ 0.94
Ccl1-202ENSMUST00000108189 Lamc3Q9R0B6 1581 aa20.81■□□□□ 0.92
Ccl1-202ENSMUST00000108189 Cngb1E1AZ71 1325 aa20.75■□□□□ 0.91
Ccl1-202ENSMUST00000108189 Golga3P55937 1487 aa20.75■□□□□ 0.91
Ccl1-202ENSMUST00000108189 Npm1Q61937 292 aaKnown RBP20.74■□□□□ 0.91
Ccl1-202ENSMUST00000108189 Kif21aQ9QXL2 1672 aa20.66■□□□□ 0.9
Ccl1-202ENSMUST00000108189 Lrriq1Q0P5X1 1673 aa20.64■□□□□ 0.89
Ccl1-202ENSMUST00000108189 Top2bQ64511 1612 aa20.64■□□□□ 0.89
Ccl1-202ENSMUST00000108189 Cep164Q5DU05 1446 aa20.63■□□□□ 0.89
Ccl1-202ENSMUST00000108189 Il27Q8K3I6 234 aa20.6■□□□□ 0.89
Ccl1-202ENSMUST00000108189 TnnQ80Z71 1560 aa20.58■□□□□ 0.88
Ccl1-202ENSMUST00000108189 Ccdc18Q640L5 1455 aa20.54■□□□□ 0.88
Ccl1-202ENSMUST00000108189 Fmn1Q05860 1466 aa20.48■□□□□ 0.87
Ccl1-202ENSMUST00000108189 Dhx29Q6PGC1 1365 aaKnown RBP20.47■□□□□ 0.87
Ccl1-202ENSMUST00000108189 Camsap1A2AHC3 1581 aa20.45■□□□□ 0.86
Ccl1-202ENSMUST00000108189 LrpprcQ6PB66 1392 aaKnown RBP20.45■□□□□ 0.86
Ccl1-202ENSMUST00000108189 Urb2E9Q7L1 1524 aaKnown RBP20.39■□□□□ 0.85
Ccl1-202ENSMUST00000108189 Plb1Q3TTY0 1478 aa20.38■□□□□ 0.85
Ccl1-202ENSMUST00000108189 Eif4g3Q80XI3 1579 aaKnown RBP20.34■□□□□ 0.85
Ccl1-202ENSMUST00000108189 Crocc2F6XLV1 1638 aa20.32■□□□□ 0.84
Ccl1-202ENSMUST00000108189 PogzQ8BZH4 1409 aaKnown RBP20.32■□□□□ 0.84
Ccl1-202ENSMUST00000108189 Duox2A2AQ99 1517 aa20.22■□□□□ 0.83
Ccl1-202ENSMUST00000108189 Ccdc88bQ4QRL3 1481 aa20.22■□□□□ 0.83
Ccl1-202ENSMUST00000108189 Grin2bQ01097 1482 aa20.21■□□□□ 0.83
Ccl1-202ENSMUST00000108189 Ift140E9PY46 1464 aa20.19■□□□□ 0.82
Ccl1-202ENSMUST00000108189 Chic1Q8CBW7 227 aa20.14■□□□□ 0.81
Ccl1-202ENSMUST00000108189 Dnajc5P60904 198 aa20.13■□□□□ 0.81
Ccl1-202ENSMUST00000108189 Efcab5A0JP43 1406 aa20.08■□□□□ 0.8
Ccl1-202ENSMUST00000108189 Top2aQ01320 1528 aaKnown RBP20.07■□□□□ 0.8
Ccl1-202ENSMUST00000108189 Disp1Q3TDN0 1521 aa20.07■□□□□ 0.8
Ccl1-202ENSMUST00000108189 Rusc2Q80U22 1514 aa20.07■□□□□ 0.8
Ccl1-202ENSMUST00000108189 Shroom2A2ALU4 1481 aa20.07■□□□□ 0.8
Ccl1-202ENSMUST00000108189 Samd9lQ69Z37 1561 aa20.03■□□□□ 0.8
Ccl1-202ENSMUST00000108189 NrkQ9R0G8 1455 aa19.99■□□□□ 0.79
Ccl1-202ENSMUST00000108189 Pabpn1Q8CCS6 302 aaKnown RBP19.98■□□□□ 0.79
Ccl1-202ENSMUST00000108189 Rad54l2Q99NG0 1466 aa19.97■□□□□ 0.79
Ccl1-202ENSMUST00000108189 Nup160Q9Z0W3 1402 aaKnown RBP19.96■□□□□ 0.79
Ccl1-202ENSMUST00000108189 Cc2d2bA0A286YDU8 1405 aa19.94■□□□□ 0.78
Ccl1-202ENSMUST00000108189 PtprkP35822 1457 aa19.93■□□□□ 0.78
Ccl1-202ENSMUST00000108189 Shroom4Q1W617 1475 aa19.92■□□□□ 0.78
Ccl1-202ENSMUST00000108189 Pelp1Q9DBD5 1123 aaKnown RBP19.91■□□□□ 0.78
Ccl1-202ENSMUST00000108189 Pbrm1Q8BSQ9 1634 aaKnown RBP19.9■□□□□ 0.78
Ccl1-202ENSMUST00000108189 Grin2aP35436 1464 aa19.86■□□□□ 0.77
Ccl1-202ENSMUST00000108189 Magi3Q9EQJ9 1476 aa19.86■□□□□ 0.77
Ccl1-202ENSMUST00000108189 Zeb1Q64318 1117 aa19.83■□□□□ 0.77
Ccl1-202ENSMUST00000108189 AqrQ8CFQ3 1481 aaKnown RBP19.8■□□□□ 0.76
Ccl1-202ENSMUST00000108189 Col17a1Q07563 1470 aa19.79■□□□□ 0.76
Ccl1-202ENSMUST00000108189 Setd1bQ8CFT2 1985 aa19.79■□□□□ 0.76
Ccl1-202ENSMUST00000108189 Npm2Q80W85 207 aa19.78■□□□□ 0.76
Ccl1-202ENSMUST00000108189 SynmQ70IV5 1561 aa19.78■□□□□ 0.76
Ccl1-202ENSMUST00000108189 Pla2r1Q62028 1487 aa19.76■□□□□ 0.75
Ccl1-202ENSMUST00000108189 HrcG5E8J6 738 aa19.74■□□□□ 0.75
Ccl1-202ENSMUST00000108189 Fgd6Q69ZL1 1399 aa19.73■□□□□ 0.75
Ccl1-202ENSMUST00000108189 Gab3Q8BSM5 595 aa19.69■□□□□ 0.74
Ccl1-202ENSMUST00000108189 Mroh2bQ7M6Y6 1581 aa19.66■□□□□ 0.74
Ccl1-202ENSMUST00000108189 Gpatch8A2A6A1 1505 aa19.65■□□□□ 0.74
Retrieved 100 of 22,080 RNA–protein pairs in 37.7 ms