RNA–Protein interactions for RNA: ENSMUST00000107443.7

Krt40-202, Transcript of Keratin, type I cytoskeletal 40, mousemouse

TSL 1 (best) BASIC

Gene Krt40, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Krt40-202ENSMUST00000107443 Gm35339A0A140LHH9 1649 aa24.43■■□□□ 1.5
Krt40-202ENSMUST00000107443 NischQ80TM9 1593 aa24.02■■□□□ 1.44
Krt40-202ENSMUST00000107443 Abcc9P70170 1546 aa23.46■■□□□ 1.35
Krt40-202ENSMUST00000107443 Abcc8B2RUS7 1588 aa23.36■■□□□ 1.33
Krt40-202ENSMUST00000107443 ScribQ80U72 1612 aa22.77■■□□□ 1.24
Krt40-202ENSMUST00000107443 NacadQ5SWP3 1504 aa22.06■■□□□ 1.12
Krt40-202ENSMUST00000107443 Kdm5dQ62240 1548 aa21.96■■□□□ 1.11
Krt40-202ENSMUST00000107443 Dnajc5bQ9CQ94 199 aa21.66■■□□□ 1.06
Krt40-202ENSMUST00000107443 Sycp2Q9CUU3 1500 aa21.64■■□□□ 1.05
Krt40-202ENSMUST00000107443 BicraF8VPZ9 1578 aa21.39■■□□□ 1.01
Krt40-202ENSMUST00000107443 Dcaf1Q80TR8 1506 aa21.36■■□□□ 1.01
Krt40-202ENSMUST00000107443 Pds5bQ4VA53 1446 aaKnown RBP20.98■□□□□ 0.95
Krt40-202ENSMUST00000107443 Thoc2B1AZI6 1594 aaKnown RBP20.9■□□□□ 0.94
Krt40-202ENSMUST00000107443 Rb1cc1Q9ESK9 1588 aa20.87■□□□□ 0.93
Krt40-202ENSMUST00000107443 Atad2bE9Q166 1460 aaKnown RBP20.66■□□□□ 0.9
Krt40-202ENSMUST00000107443 Cc2d2aQ8CFW7 1633 aa20.56■□□□□ 0.88
Krt40-202ENSMUST00000107443 Crybg2B7ZCC2 1516 aa20.55■□□□□ 0.88
Krt40-202ENSMUST00000107443 Baz1aO88379 1555 aa20.55■□□□□ 0.88
Krt40-202ENSMUST00000107443 Ercc6F8VPZ5 1481 aa20.51■□□□□ 0.87
Krt40-202ENSMUST00000107443 Zcchc6Q5BLK4 1491 aaKnown RBP20.42■□□□□ 0.86
Krt40-202ENSMUST00000107443 Rhox8Q6VSS7 320 aa20.41■□□□□ 0.86
Krt40-202ENSMUST00000107443 Fam135aQ6NS59 1506 aa20.35■□□□□ 0.85
Krt40-202ENSMUST00000107443 Smarca2Q6DIC0 1577 aa20.34■□□□□ 0.85
Krt40-202ENSMUST00000107443 Ccdc180J3QNE4 1664 aa20.33■□□□□ 0.85
Krt40-202ENSMUST00000107443 Smarca4Q3TKT4 1613 aaKnown RBP20.24■□□□□ 0.83
Krt40-202ENSMUST00000107443 Iqgap2Q3UQ44 1575 aa20.21■□□□□ 0.83
Krt40-202ENSMUST00000107443 Phldb1Q6PDH0 1371 aaKnown RBP20.18■□□□□ 0.82
Krt40-202ENSMUST00000107443 Wdr62Q3U3T8 1523 aa20.12■□□□□ 0.81
Krt40-202ENSMUST00000107443 Frmpd1A2AKB4 1549 aa20.12■□□□□ 0.81
Krt40-202ENSMUST00000107443 Baz1bQ9Z277 1479 aa20.11■□□□□ 0.81
Krt40-202ENSMUST00000107443 Dnajc5P60904 198 aa20.1■□□□□ 0.81
Krt40-202ENSMUST00000107443 Cecr2E9Q2Z1 1453 aa20.1■□□□□ 0.81
Krt40-202ENSMUST00000107443 Ubl4bQ9CQ84 188 aa20.07■□□□□ 0.8
Krt40-202ENSMUST00000107443 Mrc2Q64449 1479 aa19.92■□□□□ 0.78
Krt40-202ENSMUST00000107443 Trim41Q5NCC3 630 aa19.91■□□□□ 0.78
Krt40-202ENSMUST00000107443 Unc13aQ4KUS2 1712 aa19.66■□□□□ 0.74
Krt40-202ENSMUST00000107443 CftrP26361 1476 aa19.54■□□□□ 0.72
Krt40-202ENSMUST00000107443 Rsf1E9PWW9 1441 aaKnown RBP19.45■□□□□ 0.7
Krt40-202ENSMUST00000107443 Cttnbp2B9EJA2 1648 aa19.45■□□□□ 0.7
Krt40-202ENSMUST00000107443 Lrriq1Q0P5X1 1673 aa19.44■□□□□ 0.7
Krt40-202ENSMUST00000107443 Synj1Q8CHC4 1574 aa19.4■□□□□ 0.7
Krt40-202ENSMUST00000107443 Cux2P70298 1426 aa19.39■□□□□ 0.69
Krt40-202ENSMUST00000107443 Brd4Q9ESU6 1400 aaKnown RBP19.37■□□□□ 0.69
Krt40-202ENSMUST00000107443 Kif15Q6P9L6 1387 aa19.31■□□□□ 0.68
Krt40-202ENSMUST00000107443 Shroom2A2ALU4 1481 aa19.28■□□□□ 0.68
Krt40-202ENSMUST00000107443 Esf1Q3V1V3 845 aaKnown RBP19.27■□□□□ 0.68
Krt40-202ENSMUST00000107443 Kif21aQ9QXL2 1672 aa19.24■□□□□ 0.67
Krt40-202ENSMUST00000107443 Npm1Q61937 292 aaKnown RBP19.2■□□□□ 0.66
Krt40-202ENSMUST00000107443 Ccdc136Q3TVA9 1136 aa19.19■□□□□ 0.66
Krt40-202ENSMUST00000107443 Eif4g3Q80XI3 1579 aaKnown RBP19.17■□□□□ 0.66
Krt40-202ENSMUST00000107443 Col17a1Q07563 1470 aa19.12■□□□□ 0.65
Krt40-202ENSMUST00000107443 Pabpn1Q8CCS6 302 aaKnown RBP19.07■□□□□ 0.64
Krt40-202ENSMUST00000107443 Cep164Q5DU05 1446 aa19.06■□□□□ 0.64
Krt40-202ENSMUST00000107443 Lamc3Q9R0B6 1581 aa19.04■□□□□ 0.64
Krt40-202ENSMUST00000107443 Urb2E9Q7L1 1524 aaKnown RBP19.01■□□□□ 0.63
Krt40-202ENSMUST00000107443 Plb1Q3TTY0 1478 aa18.97■□□□□ 0.63
Krt40-202ENSMUST00000107443 Rtl1Q7M732 1744 aa18.97■□□□□ 0.63
Krt40-202ENSMUST00000107443 Dhx29Q6PGC1 1365 aaKnown RBP18.95■□□□□ 0.62
Krt40-202ENSMUST00000107443 Top2bQ64511 1612 aa18.94■□□□□ 0.62
Krt40-202ENSMUST00000107443 Pelp1Q9DBD5 1123 aaKnown RBP18.93■□□□□ 0.62
Krt40-202ENSMUST00000107443 Il27Q8K3I6 234 aa18.89■□□□□ 0.61
Krt40-202ENSMUST00000107443 LrpprcQ6PB66 1392 aaKnown RBP18.83■□□□□ 0.61
Krt40-202ENSMUST00000107443 Ccdc18Q640L5 1455 aa18.83■□□□□ 0.6
Krt40-202ENSMUST00000107443 Crocc2F6XLV1 1638 aa18.76■□□□□ 0.59
Krt40-202ENSMUST00000107443 Ift140E9PY46 1464 aa18.76■□□□□ 0.59
Krt40-202ENSMUST00000107443 Rusc2Q80U22 1514 aa18.75■□□□□ 0.59
Krt40-202ENSMUST00000107443 Zcchc11B2RX14 1644 aaKnown RBP18.75■□□□□ 0.59
Krt40-202ENSMUST00000107443 PogzQ8BZH4 1409 aaKnown RBP18.66■□□□□ 0.58
Krt40-202ENSMUST00000107443 Pcdh10E9PXQ7 1057 aa18.65■□□□□ 0.58
Krt40-202ENSMUST00000107443 Camsap1A2AHC3 1581 aa18.64■□□□□ 0.58
Krt40-202ENSMUST00000107443 TnnQ80Z71 1560 aa18.64■□□□□ 0.58
Krt40-202ENSMUST00000107443 Ttbk1Q6PCN3 1308 aa18.56■□□□□ 0.56
Krt40-202ENSMUST00000107443 Disp1Q3TDN0 1521 aa18.55■□□□□ 0.56
Krt40-202ENSMUST00000107443 Duox2A2AQ99 1517 aa18.54■□□□□ 0.56
Krt40-202ENSMUST00000107443 Adgrl3Q80TS3 1537 aa18.54■□□□□ 0.56
Krt40-202ENSMUST00000107443 Cngb1E1AZ71 1325 aa18.51■□□□□ 0.55
Krt40-202ENSMUST00000107443 Arhgef5E9Q7D5 1581 aa18.51■□□□□ 0.55
Krt40-202ENSMUST00000107443 Cc2d2bA0A286YDU8 1405 aa18.5■□□□□ 0.55
Krt40-202ENSMUST00000107443 Golga3P55937 1487 aa18.5■□□□□ 0.55
Krt40-202ENSMUST00000107443 PtprkP35822 1457 aa18.48■□□□□ 0.55
Krt40-202ENSMUST00000107443 Nup160Q9Z0W3 1402 aaKnown RBP18.48■□□□□ 0.55
Krt40-202ENSMUST00000107443 Gm156Q58A37 223 aa18.45■□□□□ 0.54
Krt40-202ENSMUST00000107443 Fgd6Q69ZL1 1399 aa18.4■□□□□ 0.54
Krt40-202ENSMUST00000107443 Gapvd1Q6PAR5 1458 aa18.39■□□□□ 0.54
Krt40-202ENSMUST00000107443 PtprtQ99M80 1454 aa18.39■□□□□ 0.54
Krt40-202ENSMUST00000107443 Grin2bQ01097 1482 aa18.39■□□□□ 0.53
Krt40-202ENSMUST00000107443 Cep170Q6A065 1588 aa18.38■□□□□ 0.53
Krt40-202ENSMUST00000107443 Fmn1Q05860 1466 aa18.38■□□□□ 0.53
Krt40-202ENSMUST00000107443 Samd9lQ69Z37 1561 aa18.35■□□□□ 0.53
Krt40-202ENSMUST00000107443 Pbrm1Q8BSQ9 1634 aaKnown RBP18.34■□□□□ 0.53
Krt40-202ENSMUST00000107443 AqrQ8CFQ3 1481 aaKnown RBP18.32■□□□□ 0.52
Krt40-202ENSMUST00000107443 Efcab5A0JP43 1406 aa18.32■□□□□ 0.52
Krt40-202ENSMUST00000107443 Rad54l2Q99NG0 1466 aa18.29■□□□□ 0.52
Krt40-202ENSMUST00000107443 Grin2aP35436 1464 aa18.27■□□□□ 0.52
Krt40-202ENSMUST00000107443 AknaQ80VW7 1404 aa18.27■□□□□ 0.52
Krt40-202ENSMUST00000107443 Setd1bQ8CFT2 1985 aa18.25■□□□□ 0.51
Krt40-202ENSMUST00000107443 Ythdc2B2RR83 1445 aaKnown RBP18.23■□□□□ 0.51
Krt40-202ENSMUST00000107443 Magi3Q9EQJ9 1476 aa18.22■□□□□ 0.51
Krt40-202ENSMUST00000107443 Abcc1O35379 1528 aa18.21■□□□□ 0.51
Krt40-202ENSMUST00000107443 CadpsQ80TJ1 1355 aa18.18■□□□□ 0.5
Retrieved 100 of 22,080 RNA–protein pairs in 22.3 ms