RNA–Protein interactions for RNA: ENSMUST00000107256.3

Rab38-201, Transcript of Ras-related protein Rab-38, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rab38, Length 1,577 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rab38-201ENSMUST00000107256 Gm35339A0A140LHH9 1649 aa22.8■■□□□ 1.24
Rab38-201ENSMUST00000107256 NischQ80TM9 1593 aa22.2■■□□□ 1.14
Rab38-201ENSMUST00000107256 Abcc9P70170 1546 aa21.84■■□□□ 1.09
Rab38-201ENSMUST00000107256 Abcc8B2RUS7 1588 aa21.65■■□□□ 1.06
Rab38-201ENSMUST00000107256 ScribQ80U72 1612 aa21.28■■□□□ 1
Rab38-201ENSMUST00000107256 NacadQ5SWP3 1504 aa20.47■□□□□ 0.87
Rab38-201ENSMUST00000107256 Kdm5dQ62240 1548 aa20.4■□□□□ 0.86
Rab38-201ENSMUST00000107256 Dnajc5bQ9CQ94 199 aa20.31■□□□□ 0.84
Rab38-201ENSMUST00000107256 Sycp2Q9CUU3 1500 aa20.11■□□□□ 0.81
Rab38-201ENSMUST00000107256 BicraF8VPZ9 1578 aa19.97■□□□□ 0.79
Rab38-201ENSMUST00000107256 Dcaf1Q80TR8 1506 aa19.81■□□□□ 0.76
Rab38-201ENSMUST00000107256 Thoc2B1AZI6 1594 aaKnown RBP19.61■□□□□ 0.73
Rab38-201ENSMUST00000107256 Pds5bQ4VA53 1446 aaKnown RBP19.47■□□□□ 0.71
Rab38-201ENSMUST00000107256 Rb1cc1Q9ESK9 1588 aa19.31■□□□□ 0.68
Rab38-201ENSMUST00000107256 Cc2d2aQ8CFW7 1633 aa19.24■□□□□ 0.67
Rab38-201ENSMUST00000107256 Atad2bE9Q166 1460 aaKnown RBP19.18■□□□□ 0.66
Rab38-201ENSMUST00000107256 Ercc6F8VPZ5 1481 aa19.04■□□□□ 0.64
Rab38-201ENSMUST00000107256 Fam135aQ6NS59 1506 aa19.02■□□□□ 0.64
Rab38-201ENSMUST00000107256 Baz1aO88379 1555 aa18.98■□□□□ 0.63
Rab38-201ENSMUST00000107256 Crybg2B7ZCC2 1516 aa18.98■□□□□ 0.63
Rab38-201ENSMUST00000107256 Dnajc5P60904 198 aa18.95■□□□□ 0.62
Rab38-201ENSMUST00000107256 Smarca2Q6DIC0 1577 aa18.91■□□□□ 0.62
Rab38-201ENSMUST00000107256 Ccdc180J3QNE4 1664 aa18.89■□□□□ 0.61
Rab38-201ENSMUST00000107256 Smarca4Q3TKT4 1613 aaKnown RBP18.79■□□□□ 0.6
Rab38-201ENSMUST00000107256 Zcchc6Q5BLK4 1491 aaKnown RBP18.79■□□□□ 0.6
Rab38-201ENSMUST00000107256 Iqgap2Q3UQ44 1575 aa18.79■□□□□ 0.6
Rab38-201ENSMUST00000107256 Baz1bQ9Z277 1479 aa18.74■□□□□ 0.59
Rab38-201ENSMUST00000107256 Wdr62Q3U3T8 1523 aa18.73■□□□□ 0.59
Rab38-201ENSMUST00000107256 Phldb1Q6PDH0 1371 aaKnown RBP18.71■□□□□ 0.59
Rab38-201ENSMUST00000107256 Frmpd1A2AKB4 1549 aa18.7■□□□□ 0.58
Rab38-201ENSMUST00000107256 Trim41Q5NCC3 630 aa18.59■□□□□ 0.57
Rab38-201ENSMUST00000107256 Cecr2E9Q2Z1 1453 aa18.58■□□□□ 0.56
Rab38-201ENSMUST00000107256 Mapk8ip2Q9ERE9 830 aa18.58■□□□□ 0.56
Rab38-201ENSMUST00000107256 Mrc2Q64449 1479 aa18.54■□□□□ 0.56
Rab38-201ENSMUST00000107256 Ubl4bQ9CQ84 188 aa18.54■□□□□ 0.56
Rab38-201ENSMUST00000107256 Rhox8Q6VSS7 320 aa18.5■□□□□ 0.55
Rab38-201ENSMUST00000107256 Unc13aQ4KUS2 1712 aa18.47■□□□□ 0.55
Rab38-201ENSMUST00000107256 Lrriq1Q0P5X1 1673 aa18.22■□□□□ 0.51
Rab38-201ENSMUST00000107256 Rsf1E9PWW9 1441 aaKnown RBP18.12■□□□□ 0.49
Rab38-201ENSMUST00000107256 Shroom2A2ALU4 1481 aa18.07■□□□□ 0.48
Rab38-201ENSMUST00000107256 CftrP26361 1476 aa18.03■□□□□ 0.48
Rab38-201ENSMUST00000107256 Cttnbp2B9EJA2 1648 aa18.02■□□□□ 0.48
Rab38-201ENSMUST00000107256 Kif21aQ9QXL2 1672 aa17.97■□□□□ 0.47
Rab38-201ENSMUST00000107256 Col17a1Q07563 1470 aa17.95■□□□□ 0.46
Rab38-201ENSMUST00000107256 Synj1Q8CHC4 1574 aa17.94■□□□□ 0.46
Rab38-201ENSMUST00000107256 Eif4g3Q80XI3 1579 aaKnown RBP17.94■□□□□ 0.46
Rab38-201ENSMUST00000107256 Cux2P70298 1426 aa17.93■□□□□ 0.46
Rab38-201ENSMUST00000107256 Kif15Q6P9L6 1387 aa17.8■□□□□ 0.44
Rab38-201ENSMUST00000107256 Chic1Q8CBW7 227 aa17.79■□□□□ 0.44
Rab38-201ENSMUST00000107256 Brd4Q9ESU6 1400 aaKnown RBP17.76■□□□□ 0.43
Rab38-201ENSMUST00000107256 Top2bQ64511 1612 aa17.73■□□□□ 0.43
Rab38-201ENSMUST00000107256 Pabpn1Q8CCS6 302 aaKnown RBP17.72■□□□□ 0.43
Rab38-201ENSMUST00000107256 Urb2E9Q7L1 1524 aaKnown RBP17.65■□□□□ 0.42
Rab38-201ENSMUST00000107256 Npm1Q61937 292 aaKnown RBP17.65■□□□□ 0.42
Rab38-201ENSMUST00000107256 Lamc3Q9R0B6 1581 aa17.64■□□□□ 0.41
Rab38-201ENSMUST00000107256 Zcchc11B2RX14 1644 aaKnown RBP17.59■□□□□ 0.41
Rab38-201ENSMUST00000107256 Plb1Q3TTY0 1478 aa17.58■□□□□ 0.41
Rab38-201ENSMUST00000107256 Esf1Q3V1V3 845 aaKnown RBP17.58■□□□□ 0.41
Rab38-201ENSMUST00000107256 Cep164Q5DU05 1446 aa17.57■□□□□ 0.4
Rab38-201ENSMUST00000107256 Rtl1Q7M732 1744 aa17.54■□□□□ 0.4
Rab38-201ENSMUST00000107256 Pelp1Q9DBD5 1123 aaKnown RBP17.53■□□□□ 0.4
Rab38-201ENSMUST00000107256 Dhx29Q6PGC1 1365 aaKnown RBP17.51■□□□□ 0.39
Rab38-201ENSMUST00000107256 Pcdh10E9PXQ7 1057 aa17.48■□□□□ 0.39
Rab38-201ENSMUST00000107256 Rusc2Q80U22 1514 aa17.48■□□□□ 0.39
Rab38-201ENSMUST00000107256 Ccdc136Q3TVA9 1136 aa17.45■□□□□ 0.38
Rab38-201ENSMUST00000107256 Crocc2F6XLV1 1638 aa17.43■□□□□ 0.38
Rab38-201ENSMUST00000107256 Arhgef5E9Q7D5 1581 aa17.39■□□□□ 0.37
Rab38-201ENSMUST00000107256 Ift140E9PY46 1464 aa17.38■□□□□ 0.37
Rab38-201ENSMUST00000107256 LrpprcQ6PB66 1392 aaKnown RBP17.36■□□□□ 0.37
Rab38-201ENSMUST00000107256 Ccdc18Q640L5 1455 aa17.34■□□□□ 0.37
Rab38-201ENSMUST00000107256 Il27Q8K3I6 234 aa17.33■□□□□ 0.37
Rab38-201ENSMUST00000107256 Adgrl3Q80TS3 1537 aa17.29■□□□□ 0.36
Rab38-201ENSMUST00000107256 TnnQ80Z71 1560 aa17.28■□□□□ 0.36
Rab38-201ENSMUST00000107256 Camsap1A2AHC3 1581 aa17.26■□□□□ 0.35
Rab38-201ENSMUST00000107256 PogzQ8BZH4 1409 aaKnown RBP17.23■□□□□ 0.35
Rab38-201ENSMUST00000107256 Ttbk1Q6PCN3 1308 aa17.21■□□□□ 0.35
Rab38-201ENSMUST00000107256 Disp1Q3TDN0 1521 aa17.18■□□□□ 0.34
Rab38-201ENSMUST00000107256 PtprkP35822 1457 aa17.18■□□□□ 0.34
Rab38-201ENSMUST00000107256 Setd1bQ8CFT2 1985 aa17.18■□□□□ 0.34
Rab38-201ENSMUST00000107256 Cep170Q6A065 1588 aa17.18■□□□□ 0.34
Rab38-201ENSMUST00000107256 PtprtQ99M80 1454 aa17.17■□□□□ 0.34
Rab38-201ENSMUST00000107256 Gm156Q58A37 223 aa17.14■□□□□ 0.33
Rab38-201ENSMUST00000107256 Duox2A2AQ99 1517 aa17.13■□□□□ 0.33
Rab38-201ENSMUST00000107256 Nup160Q9Z0W3 1402 aaKnown RBP17.12■□□□□ 0.33
Rab38-201ENSMUST00000107256 Golga3P55937 1487 aa17.12■□□□□ 0.33
Rab38-201ENSMUST00000107256 Gapvd1Q6PAR5 1458 aa17.12■□□□□ 0.33
Rab38-201ENSMUST00000107256 Cc2d2bA0A286YDU8 1405 aa17.11■□□□□ 0.33
Rab38-201ENSMUST00000107256 Pbrm1Q8BSQ9 1634 aaKnown RBP17.09■□□□□ 0.33
Rab38-201ENSMUST00000107256 Pprc1Q6NZN1 1644 aa17.03■□□□□ 0.32
Rab38-201ENSMUST00000107256 Samd9lQ69Z37 1561 aa17.03■□□□□ 0.32
Rab38-201ENSMUST00000107256 Fgd6Q69ZL1 1399 aa17.02■□□□□ 0.32
Rab38-201ENSMUST00000107256 AqrQ8CFQ3 1481 aaKnown RBP16.97■□□□□ 0.31
Rab38-201ENSMUST00000107256 Grin2bQ01097 1482 aa16.96■□□□□ 0.3
Rab38-201ENSMUST00000107256 Abcc1O35379 1528 aa16.92■□□□□ 0.3
Rab38-201ENSMUST00000107256 Rapgef2Q8CHG7 1496 aa16.92■□□□□ 0.3
Rab38-201ENSMUST00000107256 Grin2aP35436 1464 aa16.9■□□□□ 0.3
Rab38-201ENSMUST00000107256 Ythdc2B2RR83 1445 aaKnown RBP16.9■□□□□ 0.3
Rab38-201ENSMUST00000107256 Rad54l2Q99NG0 1466 aa16.89■□□□□ 0.29
Rab38-201ENSMUST00000107256 Magi3Q9EQJ9 1476 aa16.89■□□□□ 0.29
Rab38-201ENSMUST00000107256 AknaQ80VW7 1404 aa16.88■□□□□ 0.29
Retrieved 100 of 22,080 RNA–protein pairs in 25.6 ms