RNA–Protein interactions for RNA: ENSMUST00000105790.7

Clcnka-202, Transcript of Chloride channel protein ClC-Ka, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clcnka, Length 2,511 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcnka-202ENSMUST00000105790 NischQ80TM9 1593 aa28.62■■■□□ 2.17
Clcnka-202ENSMUST00000105790 Gm35339A0A140LHH9 1649 aa28.54■■■□□ 2.16
Clcnka-202ENSMUST00000105790 Abcc9P70170 1546 aa27.73■■■□□ 2.03
Clcnka-202ENSMUST00000105790 Abcc8B2RUS7 1588 aa27.43■■□□□ 1.98
Clcnka-202ENSMUST00000105790 ScribQ80U72 1612 aa26.07■■□□□ 1.76
Clcnka-202ENSMUST00000105790 Rhox8Q6VSS7 320 aa25.62■■□□□ 1.69
Clcnka-202ENSMUST00000105790 Kdm5dQ62240 1548 aa25.38■■□□□ 1.65
Clcnka-202ENSMUST00000105790 Dcaf1Q80TR8 1506 aa25.35■■□□□ 1.65
Clcnka-202ENSMUST00000105790 NacadQ5SWP3 1504 aa25.27■■□□□ 1.64
Clcnka-202ENSMUST00000105790 Rb1cc1Q9ESK9 1588 aa25.01■■□□□ 1.59
Clcnka-202ENSMUST00000105790 Sycp2Q9CUU3 1500 aa24.76■■□□□ 1.55
Clcnka-202ENSMUST00000105790 Baz1aO88379 1555 aa24.67■■□□□ 1.54
Clcnka-202ENSMUST00000105790 Ccdc180J3QNE4 1664 aa24.59■■□□□ 1.53
Clcnka-202ENSMUST00000105790 Crybg2B7ZCC2 1516 aa24.35■■□□□ 1.49
Clcnka-202ENSMUST00000105790 BicraF8VPZ9 1578 aa24.34■■□□□ 1.49
Clcnka-202ENSMUST00000105790 Zcchc6Q5BLK4 1491 aaKnown RBP24.3■■□□□ 1.48
Clcnka-202ENSMUST00000105790 Rtl1Q7M732 1744 aa24.23■■□□□ 1.47
Clcnka-202ENSMUST00000105790 Smarca2Q6DIC0 1577 aa24.03■■□□□ 1.44
Clcnka-202ENSMUST00000105790 Ccdc136Q3TVA9 1136 aa23.89■■□□□ 1.41
Clcnka-202ENSMUST00000105790 Cecr2E9Q2Z1 1453 aa23.76■■□□□ 1.39
Clcnka-202ENSMUST00000105790 Smarca4Q3TKT4 1613 aaKnown RBP23.49■■□□□ 1.35
Clcnka-202ENSMUST00000105790 Pds5bQ4VA53 1446 aaKnown RBP23.44■■□□□ 1.34
Clcnka-202ENSMUST00000105790 Brd4Q9ESU6 1400 aaKnown RBP23.4■■□□□ 1.34
Clcnka-202ENSMUST00000105790 Atad2bE9Q166 1460 aaKnown RBP23.39■■□□□ 1.33
Clcnka-202ENSMUST00000105790 Trim41Q5NCC3 630 aa23.38■■□□□ 1.33
Clcnka-202ENSMUST00000105790 Synj1Q8CHC4 1574 aa23.34■■□□□ 1.33
Clcnka-202ENSMUST00000105790 Iqgap2Q3UQ44 1575 aa23.29■■□□□ 1.32
Clcnka-202ENSMUST00000105790 CftrP26361 1476 aa23.29■■□□□ 1.32
Clcnka-202ENSMUST00000105790 Cttnbp2B9EJA2 1648 aa23.19■■□□□ 1.3
Clcnka-202ENSMUST00000105790 Esf1Q3V1V3 845 aaKnown RBP23.05■■□□□ 1.28
Clcnka-202ENSMUST00000105790 Ercc6F8VPZ5 1481 aa23.01■■□□□ 1.27
Clcnka-202ENSMUST00000105790 Thoc2B1AZI6 1594 aaKnown RBP22.99■■□□□ 1.27
Clcnka-202ENSMUST00000105790 Wdr62Q3U3T8 1523 aa22.97■■□□□ 1.27
Clcnka-202ENSMUST00000105790 Frmpd1A2AKB4 1549 aa22.96■■□□□ 1.27
Clcnka-202ENSMUST00000105790 Cngb1E1AZ71 1325 aa22.91■■□□□ 1.26
Clcnka-202ENSMUST00000105790 Golga3P55937 1487 aa22.86■■□□□ 1.25
Clcnka-202ENSMUST00000105790 Dnajc5bQ9CQ94 199 aa22.78■■□□□ 1.24
Clcnka-202ENSMUST00000105790 Cc2d2aQ8CFW7 1633 aa22.72■■□□□ 1.23
Clcnka-202ENSMUST00000105790 Top2bQ64511 1612 aa22.71■■□□□ 1.23
Clcnka-202ENSMUST00000105790 Unc13aQ4KUS2 1712 aa22.67■■□□□ 1.22
Clcnka-202ENSMUST00000105790 HrcG5E8J6 738 aa22.66■■□□□ 1.22
Clcnka-202ENSMUST00000105790 Phldb1Q6PDH0 1371 aaKnown RBP22.63■■□□□ 1.21
Clcnka-202ENSMUST00000105790 Fam135aQ6NS59 1506 aa22.59■■□□□ 1.21
Clcnka-202ENSMUST00000105790 Rsf1E9PWW9 1441 aaKnown RBP22.56■■□□□ 1.2
Clcnka-202ENSMUST00000105790 Ccdc88bQ4QRL3 1481 aa22.54■■□□□ 1.2
Clcnka-202ENSMUST00000105790 Chic1Q8CBW7 227 aa22.51■■□□□ 1.19
Clcnka-202ENSMUST00000105790 Ubl4bQ9CQ84 188 aa22.48■■□□□ 1.19
Clcnka-202ENSMUST00000105790 Kif15Q6P9L6 1387 aa22.43■■□□□ 1.18
Clcnka-202ENSMUST00000105790 Fmn1Q05860 1466 aa22.43■■□□□ 1.18
Clcnka-202ENSMUST00000105790 Lamc3Q9R0B6 1581 aa22.38■■□□□ 1.17
Clcnka-202ENSMUST00000105790 Cep164Q5DU05 1446 aa22.36■■□□□ 1.17
Clcnka-202ENSMUST00000105790 TnnQ80Z71 1560 aa22.34■■□□□ 1.17
Clcnka-202ENSMUST00000105790 Cux2P70298 1426 aa22.24■■□□□ 1.15
Clcnka-202ENSMUST00000105790 Il27Q8K3I6 234 aa22.2■■□□□ 1.14
Clcnka-202ENSMUST00000105790 Top2aQ01320 1528 aaKnown RBP22.17■■□□□ 1.14
Clcnka-202ENSMUST00000105790 Baz1bQ9Z277 1479 aa22.16■■□□□ 1.14
Clcnka-202ENSMUST00000105790 Gab3Q8BSM5 595 aa22.16■■□□□ 1.14
Clcnka-202ENSMUST00000105790 Mrc2Q64449 1479 aa22.13■■□□□ 1.13
Clcnka-202ENSMUST00000105790 Camsap1A2AHC3 1581 aa22.11■■□□□ 1.13
Clcnka-202ENSMUST00000105790 Ccdc18Q640L5 1455 aa22.09■■□□□ 1.13
Clcnka-202ENSMUST00000105790 Npm1Q61937 292 aaKnown RBP22.07■■□□□ 1.12
Clcnka-202ENSMUST00000105790 Grin2bQ01097 1482 aa21.89■■□□□ 1.09
Clcnka-202ENSMUST00000105790 LrpprcQ6PB66 1392 aaKnown RBP21.89■■□□□ 1.09
Clcnka-202ENSMUST00000105790 Kif21aQ9QXL2 1672 aa21.89■■□□□ 1.09
Clcnka-202ENSMUST00000105790 PtprkP35822 1457 aa21.84■■□□□ 1.09
Clcnka-202ENSMUST00000105790 Dhx29Q6PGC1 1365 aaKnown RBP21.82■■□□□ 1.08
Clcnka-202ENSMUST00000105790 Npm2Q80W85 207 aa21.81■■□□□ 1.08
Clcnka-202ENSMUST00000105790 Rapgef2Q8CHG7 1496 aa21.81■■□□□ 1.08
Clcnka-202ENSMUST00000105790 PogzQ8BZH4 1409 aaKnown RBP21.8■■□□□ 1.08
Clcnka-202ENSMUST00000105790 NrkQ9R0G8 1455 aa21.78■■□□□ 1.08
Clcnka-202ENSMUST00000105790 Shroom4Q1W617 1475 aa21.75■■□□□ 1.07
Clcnka-202ENSMUST00000105790 Duox2A2AQ99 1517 aa21.74■■□□□ 1.07
Clcnka-202ENSMUST00000105790 Rpgrip1Q9EPQ2 1331 aa21.72■■□□□ 1.07
Clcnka-202ENSMUST00000105790 Crocc2F6XLV1 1638 aa21.69■■□□□ 1.06
Clcnka-202ENSMUST00000105790 Cep162Q6ZQ06 1403 aa21.67■■□□□ 1.06
Clcnka-202ENSMUST00000105790 Efcab5A0JP43 1406 aa21.67■■□□□ 1.06
Clcnka-202ENSMUST00000105790 Plb1Q3TTY0 1478 aa21.61■■□□□ 1.05
Clcnka-202ENSMUST00000105790 Lrriq1Q0P5X1 1673 aa21.61■■□□□ 1.05
Clcnka-202ENSMUST00000105790 Myt1lP97500 1187 aa21.61■■□□□ 1.05
Clcnka-202ENSMUST00000105790 Zeb1Q64318 1117 aa21.61■■□□□ 1.05
Clcnka-202ENSMUST00000105790 Samd9lQ69Z37 1561 aa21.6■■□□□ 1.05
Clcnka-202ENSMUST00000105790 Urb2E9Q7L1 1524 aaKnown RBP21.58■■□□□ 1.04
Clcnka-202ENSMUST00000105790 Arhgap35Q91YM2 1499 aa21.58■■□□□ 1.04
Clcnka-202ENSMUST00000105790 Eif4g1Q6NZJ6 1600 aaKnown RBP21.57■■□□□ 1.04
Clcnka-202ENSMUST00000105790 Mroh2bQ7M6Y6 1581 aa21.5■■□□□ 1.03
Clcnka-202ENSMUST00000105790 Rad54l2Q99NG0 1466 aa21.49■■□□□ 1.03
Clcnka-202ENSMUST00000105790 Map3k1P53349 1493 aa21.43■■□□□ 1.02
Clcnka-202ENSMUST00000105790 Ehmt2Q9Z148 1263 aaKnown RBP21.42■■□□□ 1.02
Clcnka-202ENSMUST00000105790 SynmQ70IV5 1561 aa21.42■■□□□ 1.02
Clcnka-202ENSMUST00000105790 Disp1Q3TDN0 1521 aa21.4■■□□□ 1.02
Clcnka-202ENSMUST00000105790 Ift140E9PY46 1464 aa21.37■■□□□ 1.01
Clcnka-202ENSMUST00000105790 Clip1Q922J3 1391 aa21.36■■□□□ 1.01
Clcnka-202ENSMUST00000105790 Magi3Q9EQJ9 1476 aa21.34■■□□□ 1.01
Clcnka-202ENSMUST00000105790 Grin2aP35436 1464 aa21.32■■□□□ 1
Clcnka-202ENSMUST00000105790 Pla2r1Q62028 1487 aa21.3■■□□□ 1
Clcnka-202ENSMUST00000105790 Carmil1Q6EDY6 1374 aa21.3■■□□□ 1
Clcnka-202ENSMUST00000105790 AqrQ8CFQ3 1481 aaKnown RBP21.3■■□□□ 1
Clcnka-202ENSMUST00000105790 Setd1bQ8CFT2 1985 aa21.27■■□□□ 1
Clcnka-202ENSMUST00000105790 Eif4g3Q80XI3 1579 aaKnown RBP21.26■□□□□ 0.99
Clcnka-202ENSMUST00000105790 Nup160Q9Z0W3 1402 aaKnown RBP21.25■□□□□ 0.99
Retrieved 100 of 22,080 RNA–protein pairs in 14.2 ms