RNA–Protein interactions for RNA: ENSMUST00000103625.2

Trav3n-3-201, Transcript of T cell receptor alpha variable 3D-3 (Fragment), mousemouse

APPRIS P1 BASIC

Gene Trav3n-3, Length 276 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3-201ENSMUST00000103625 Gm35339A0A140LHH9 1649 aa31.67■■■□□ 2.66
Trav3n-3-201ENSMUST00000103625 NischQ80TM9 1593 aa31.16■■■□□ 2.58
Trav3n-3-201ENSMUST00000103625 Abcc9P70170 1546 aa30.14■■■□□ 2.42
Trav3n-3-201ENSMUST00000103625 Abcc8B2RUS7 1588 aa30.13■■■□□ 2.41
Trav3n-3-201ENSMUST00000103625 ScribQ80U72 1612 aa29.11■■■□□ 2.25
Trav3n-3-201ENSMUST00000103625 NacadQ5SWP3 1504 aa28.22■■■□□ 2.11
Trav3n-3-201ENSMUST00000103625 Kdm5dQ62240 1548 aa28.13■■■□□ 2.09
Trav3n-3-201ENSMUST00000103625 Dcaf1Q80TR8 1506 aa27.76■■■□□ 2.03
Trav3n-3-201ENSMUST00000103625 Sycp2Q9CUU3 1500 aa27.65■■■□□ 2.02
Trav3n-3-201ENSMUST00000103625 BicraF8VPZ9 1578 aa27.26■■□□□ 1.96
Trav3n-3-201ENSMUST00000103625 Rb1cc1Q9ESK9 1588 aa27.17■■□□□ 1.94
Trav3n-3-201ENSMUST00000103625 Ccdc180J3QNE4 1664 aa26.86■■□□□ 1.89
Trav3n-3-201ENSMUST00000103625 Baz1aO88379 1555 aa26.77■■□□□ 1.88
Trav3n-3-201ENSMUST00000103625 Rhox8Q6VSS7 320 aa26.74■■□□□ 1.87
Trav3n-3-201ENSMUST00000103625 Crybg2B7ZCC2 1516 aa26.72■■□□□ 1.87
Trav3n-3-201ENSMUST00000103625 Pds5bQ4VA53 1446 aaKnown RBP26.57■■□□□ 1.84
Trav3n-3-201ENSMUST00000103625 Dnajc5bQ9CQ94 199 aa26.52■■□□□ 1.84
Trav3n-3-201ENSMUST00000103625 Thoc2B1AZI6 1594 aaKnown RBP26.38■■□□□ 1.81
Trav3n-3-201ENSMUST00000103625 Zcchc6Q5BLK4 1491 aaKnown RBP26.36■■□□□ 1.81
Trav3n-3-201ENSMUST00000103625 Atad2bE9Q166 1460 aaKnown RBP26.29■■□□□ 1.8
Trav3n-3-201ENSMUST00000103625 Smarca4Q3TKT4 1613 aaKnown RBP26.05■■□□□ 1.76
Trav3n-3-201ENSMUST00000103625 Ercc6F8VPZ5 1481 aa26.03■■□□□ 1.76
Trav3n-3-201ENSMUST00000103625 Smarca2Q6DIC0 1577 aa25.99■■□□□ 1.75
Trav3n-3-201ENSMUST00000103625 Cc2d2aQ8CFW7 1633 aa25.95■■□□□ 1.74
Trav3n-3-201ENSMUST00000103625 Iqgap2Q3UQ44 1575 aa25.91■■□□□ 1.74
Trav3n-3-201ENSMUST00000103625 Cecr2E9Q2Z1 1453 aa25.84■■□□□ 1.73
Trav3n-3-201ENSMUST00000103625 Fam135aQ6NS59 1506 aa25.78■■□□□ 1.72
Trav3n-3-201ENSMUST00000103625 Wdr62Q3U3T8 1523 aa25.7■■□□□ 1.7
Trav3n-3-201ENSMUST00000103625 Frmpd1A2AKB4 1549 aa25.63■■□□□ 1.69
Trav3n-3-201ENSMUST00000103625 Rtl1Q7M732 1744 aa25.6■■□□□ 1.69
Trav3n-3-201ENSMUST00000103625 Baz1bQ9Z277 1479 aa25.59■■□□□ 1.69
Trav3n-3-201ENSMUST00000103625 Phldb1Q6PDH0 1371 aaKnown RBP25.55■■□□□ 1.68
Trav3n-3-201ENSMUST00000103625 Cttnbp2B9EJA2 1648 aa25.34■■□□□ 1.65
Trav3n-3-201ENSMUST00000103625 Unc13aQ4KUS2 1712 aa25.33■■□□□ 1.65
Trav3n-3-201ENSMUST00000103625 CftrP26361 1476 aa25.29■■□□□ 1.64
Trav3n-3-201ENSMUST00000103625 Ubl4bQ9CQ84 188 aa25.27■■□□□ 1.64
Trav3n-3-201ENSMUST00000103625 Brd4Q9ESU6 1400 aaKnown RBP25.25■■□□□ 1.63
Trav3n-3-201ENSMUST00000103625 Synj1Q8CHC4 1574 aa25.22■■□□□ 1.63
Trav3n-3-201ENSMUST00000103625 Mrc2Q64449 1479 aa25.16■■□□□ 1.62
Trav3n-3-201ENSMUST00000103625 Ccdc136Q3TVA9 1136 aa25.02■■□□□ 1.6
Trav3n-3-201ENSMUST00000103625 Esf1Q3V1V3 845 aaKnown RBP24.83■■□□□ 1.57
Trav3n-3-201ENSMUST00000103625 Rsf1E9PWW9 1441 aaKnown RBP24.76■■□□□ 1.55
Trav3n-3-201ENSMUST00000103625 Trim41Q5NCC3 630 aa24.73■■□□□ 1.55
Trav3n-3-201ENSMUST00000103625 Cux2P70298 1426 aa24.69■■□□□ 1.54
Trav3n-3-201ENSMUST00000103625 Kif15Q6P9L6 1387 aa24.68■■□□□ 1.54
Trav3n-3-201ENSMUST00000103625 Lrriq1Q0P5X1 1673 aa24.63■■□□□ 1.53
Trav3n-3-201ENSMUST00000103625 Lamc3Q9R0B6 1581 aa24.62■■□□□ 1.53
Trav3n-3-201ENSMUST00000103625 Kif21aQ9QXL2 1672 aa24.56■■□□□ 1.52
Trav3n-3-201ENSMUST00000103625 Npm1Q61937 292 aaKnown RBP24.43■■□□□ 1.5
Trav3n-3-201ENSMUST00000103625 Cep164Q5DU05 1446 aa24.38■■□□□ 1.49
Trav3n-3-201ENSMUST00000103625 TnnQ80Z71 1560 aa24.32■■□□□ 1.48
Trav3n-3-201ENSMUST00000103625 Top2bQ64511 1612 aa24.31■■□□□ 1.48
Trav3n-3-201ENSMUST00000103625 Eif4g3Q80XI3 1579 aaKnown RBP24.3■■□□□ 1.48
Trav3n-3-201ENSMUST00000103625 Golga3P55937 1487 aa24.29■■□□□ 1.48
Trav3n-3-201ENSMUST00000103625 Ccdc18Q640L5 1455 aa24.29■■□□□ 1.48
Trav3n-3-201ENSMUST00000103625 Dnajc5P60904 198 aa24.19■■□□□ 1.46
Trav3n-3-201ENSMUST00000103625 Dhx29Q6PGC1 1365 aaKnown RBP24.16■■□□□ 1.46
Trav3n-3-201ENSMUST00000103625 Camsap1A2AHC3 1581 aa24.16■■□□□ 1.46
Trav3n-3-201ENSMUST00000103625 Urb2E9Q7L1 1524 aaKnown RBP24.14■■□□□ 1.45
Trav3n-3-201ENSMUST00000103625 Cngb1E1AZ71 1325 aa24.13■■□□□ 1.45
Trav3n-3-201ENSMUST00000103625 LrpprcQ6PB66 1392 aaKnown RBP24.12■■□□□ 1.45
Trav3n-3-201ENSMUST00000103625 Il27Q8K3I6 234 aa24.11■■□□□ 1.45
Trav3n-3-201ENSMUST00000103625 Crocc2F6XLV1 1638 aa24.1■■□□□ 1.45
Trav3n-3-201ENSMUST00000103625 Plb1Q3TTY0 1478 aa24.08■■□□□ 1.45
Trav3n-3-201ENSMUST00000103625 Fmn1Q05860 1466 aa24.07■■□□□ 1.44
Trav3n-3-201ENSMUST00000103625 Shroom2A2ALU4 1481 aa24.06■■□□□ 1.44
Trav3n-3-201ENSMUST00000103625 PogzQ8BZH4 1409 aaKnown RBP23.97■■□□□ 1.43
Trav3n-3-201ENSMUST00000103625 Ift140E9PY46 1464 aa23.94■■□□□ 1.42
Trav3n-3-201ENSMUST00000103625 Rusc2Q80U22 1514 aa23.87■■□□□ 1.41
Trav3n-3-201ENSMUST00000103625 Duox2A2AQ99 1517 aa23.86■■□□□ 1.41
Trav3n-3-201ENSMUST00000103625 Grin2bQ01097 1482 aa23.81■■□□□ 1.4
Trav3n-3-201ENSMUST00000103625 Pabpn1Q8CCS6 302 aaKnown RBP23.74■■□□□ 1.39
Trav3n-3-201ENSMUST00000103625 Pbrm1Q8BSQ9 1634 aaKnown RBP23.73■■□□□ 1.39
Trav3n-3-201ENSMUST00000103625 Disp1Q3TDN0 1521 aa23.69■■□□□ 1.38
Trav3n-3-201ENSMUST00000103625 Efcab5A0JP43 1406 aa23.68■■□□□ 1.38
Trav3n-3-201ENSMUST00000103625 Col17a1Q07563 1470 aa23.68■■□□□ 1.38
Trav3n-3-201ENSMUST00000103625 Samd9lQ69Z37 1561 aa23.67■■□□□ 1.38
Trav3n-3-201ENSMUST00000103625 Setd1bQ8CFT2 1985 aa23.64■■□□□ 1.38
Trav3n-3-201ENSMUST00000103625 Cc2d2bA0A286YDU8 1405 aa23.62■■□□□ 1.37
Trav3n-3-201ENSMUST00000103625 Nup160Q9Z0W3 1402 aaKnown RBP23.62■■□□□ 1.37
Trav3n-3-201ENSMUST00000103625 Top2aQ01320 1528 aaKnown RBP23.58■■□□□ 1.36
Trav3n-3-201ENSMUST00000103625 Pelp1Q9DBD5 1123 aaKnown RBP23.57■■□□□ 1.36
Trav3n-3-201ENSMUST00000103625 Ccdc88bQ4QRL3 1481 aa23.54■■□□□ 1.36
Trav3n-3-201ENSMUST00000103625 NrkQ9R0G8 1455 aa23.54■■□□□ 1.36
Trav3n-3-201ENSMUST00000103625 Zcchc11B2RX14 1644 aaKnown RBP23.53■■□□□ 1.36
Trav3n-3-201ENSMUST00000103625 Grin2aP35436 1464 aa23.48■■□□□ 1.35
Trav3n-3-201ENSMUST00000103625 AqrQ8CFQ3 1481 aaKnown RBP23.45■■□□□ 1.34
Trav3n-3-201ENSMUST00000103625 Rad54l2Q99NG0 1466 aa23.45■■□□□ 1.34
Trav3n-3-201ENSMUST00000103625 Magi3Q9EQJ9 1476 aa23.44■■□□□ 1.34
Trav3n-3-201ENSMUST00000103625 Shroom4Q1W617 1475 aa23.4■■□□□ 1.34
Trav3n-3-201ENSMUST00000103625 Gpatch8A2A6A1 1505 aa23.38■■□□□ 1.33
Trav3n-3-201ENSMUST00000103625 Fgd6Q69ZL1 1399 aa23.36■■□□□ 1.33
Trav3n-3-201ENSMUST00000103625 SynmQ70IV5 1561 aa23.35■■□□□ 1.33
Trav3n-3-201ENSMUST00000103625 Chic1Q8CBW7 227 aa23.31■■□□□ 1.32
Trav3n-3-201ENSMUST00000103625 PtprkP35822 1457 aa23.3■■□□□ 1.32
Trav3n-3-201ENSMUST00000103625 Pla2r1Q62028 1487 aa23.29■■□□□ 1.32
Trav3n-3-201ENSMUST00000103625 Cep170Q6A065 1588 aa23.21■■□□□ 1.31
Trav3n-3-201ENSMUST00000103625 Adgrl3Q80TS3 1537 aa23.2■■□□□ 1.3
Trav3n-3-201ENSMUST00000103625 Gapvd1Q6PAR5 1458 aa23.2■■□□□ 1.3
Trav3n-3-201ENSMUST00000103625 Zeb1Q64318 1117 aa23.19■■□□□ 1.3
Retrieved 100 of 22,080 RNA–protein pairs in 61.9 ms