RNA–Protein interactions for RNA: ENSMUST00000095326.9

Ccdc110-201, Transcript of Coiled-coil domain-containing protein 110, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc110, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc110-201ENSMUST00000095326 NischQ80TM9 1593 aa13.06□□□□□ -0.32
Ccdc110-201ENSMUST00000095326 Gm35339A0A140LHH9 1649 aa13.03□□□□□ -0.32
Ccdc110-201ENSMUST00000095326 Chic1Q8CBW7 227 aa12.86□□□□□ -0.35
Ccdc110-201ENSMUST00000095326 Abcc9P70170 1546 aa12.62□□□□□ -0.39
Ccdc110-201ENSMUST00000095326 Abcc8B2RUS7 1588 aa12.55□□□□□ -0.4
Ccdc110-201ENSMUST00000095326 Mapk8ip2Q9ERE9 830 aa12.2□□□□□ -0.46
Ccdc110-201ENSMUST00000095326 ScribQ80U72 1612 aa11.99□□□□□ -0.49
Ccdc110-201ENSMUST00000095326 Rhox8Q6VSS7 320 aa11.66□□□□□ -0.54
Ccdc110-201ENSMUST00000095326 Kdm5dQ62240 1548 aa11.66□□□□□ -0.54
Ccdc110-201ENSMUST00000095326 NacadQ5SWP3 1504 aa11.63□□□□□ -0.55
Ccdc110-201ENSMUST00000095326 Plppr3Q7TPB0 716 aa11.56□□□□□ -0.56
Ccdc110-201ENSMUST00000095326 Dcaf1Q80TR8 1506 aa11.54□□□□□ -0.56
Ccdc110-201ENSMUST00000095326 Phf23Q8BSN5 401 aa11.52□□□□□ -0.57
Ccdc110-201ENSMUST00000095326 Rb1cc1Q9ESK9 1588 aa11.4□□□□□ -0.58
Ccdc110-201ENSMUST00000095326 Sycp2Q9CUU3 1500 aa11.4□□□□□ -0.58
Ccdc110-201ENSMUST00000095326 Gab3Q8BSM5 595 aa11.25□□□□□ -0.61
Ccdc110-201ENSMUST00000095326 Baz1aO88379 1555 aa11.23□□□□□ -0.61
Ccdc110-201ENSMUST00000095326 BicraF8VPZ9 1578 aa11.22□□□□□ -0.61
Ccdc110-201ENSMUST00000095326 Zcchc6Q5BLK4 1491 aaKnown RBP11.13□□□□□ -0.63
Ccdc110-201ENSMUST00000095326 Ccdc180J3QNE4 1664 aa11.12□□□□□ -0.63
Ccdc110-201ENSMUST00000095326 Crybg2B7ZCC2 1516 aa11.1□□□□□ -0.63
Ccdc110-201ENSMUST00000095326 Smarca2Q6DIC0 1577 aa10.92□□□□□ -0.66
Ccdc110-201ENSMUST00000095326 Ccdc136Q3TVA9 1136 aa10.89□□□□□ -0.67
Ccdc110-201ENSMUST00000095326 Cecr2E9Q2Z1 1453 aa10.89□□□□□ -0.67
Ccdc110-201ENSMUST00000095326 Pds5bQ4VA53 1446 aaKnown RBP10.86□□□□□ -0.67
Ccdc110-201ENSMUST00000095326 Rtl1Q7M732 1744 aa10.86□□□□□ -0.67
Ccdc110-201ENSMUST00000095326 Atad2bE9Q166 1460 aaKnown RBP10.8□□□□□ -0.68
Ccdc110-201ENSMUST00000095326 Kcna4Q61423 654 aa10.8□□□□□ -0.68
Ccdc110-201ENSMUST00000095326 Senp3Q9EP97 568 aaKnown RBP10.78□□□□□ -0.68
Ccdc110-201ENSMUST00000095326 Smarca4Q3TKT4 1613 aaKnown RBP10.78□□□□□ -0.68
Ccdc110-201ENSMUST00000095326 Dnajc5bQ9CQ94 199 aa10.76□□□□□ -0.69
Ccdc110-201ENSMUST00000095326 Iqgap2Q3UQ44 1575 aa10.71□□□□□ -0.69
Ccdc110-201ENSMUST00000095326 Brd4Q9ESU6 1400 aaKnown RBP10.66□□□□□ -0.7
Ccdc110-201ENSMUST00000095326 Thoc2B1AZI6 1594 aaKnown RBP10.66□□□□□ -0.7
Ccdc110-201ENSMUST00000095326 Ercc6F8VPZ5 1481 aa10.65□□□□□ -0.7
Ccdc110-201ENSMUST00000095326 CftrP26361 1476 aa10.64□□□□□ -0.71
Ccdc110-201ENSMUST00000095326 Synj1Q8CHC4 1574 aa10.64□□□□□ -0.71
Ccdc110-201ENSMUST00000095326 Trim41Q5NCC3 630 aa10.63□□□□□ -0.71
Ccdc110-201ENSMUST00000095326 Frmpd1A2AKB4 1549 aa10.59□□□□□ -0.71
Ccdc110-201ENSMUST00000095326 Esf1Q3V1V3 845 aaKnown RBP10.59□□□□□ -0.71
Ccdc110-201ENSMUST00000095326 Wdr62Q3U3T8 1523 aa10.57□□□□□ -0.72
Ccdc110-201ENSMUST00000095326 Cttnbp2B9EJA2 1648 aa10.57□□□□□ -0.72
Ccdc110-201ENSMUST00000095326 Cc2d2aQ8CFW7 1633 aa10.55□□□□□ -0.72
Ccdc110-201ENSMUST00000095326 Phldb1Q6PDH0 1371 aaKnown RBP10.49□□□□□ -0.73
Ccdc110-201ENSMUST00000095326 Ubl4bQ9CQ84 188 aa10.47□□□□□ -0.73
Ccdc110-201ENSMUST00000095326 Fam135aQ6NS59 1506 aa10.46□□□□□ -0.73
Ccdc110-201ENSMUST00000095326 Cngb1E1AZ71 1325 aa10.45□□□□□ -0.74
Ccdc110-201ENSMUST00000095326 Ube2uB1AUC4 352 aa10.41□□□□□ -0.74
Ccdc110-201ENSMUST00000095326 Unc13aQ4KUS2 1712 aa10.4□□□□□ -0.75
Ccdc110-201ENSMUST00000095326 Golga3P55937 1487 aa10.37□□□□□ -0.75
Ccdc110-201ENSMUST00000095326 Kif15Q6P9L6 1387 aa10.33□□□□□ -0.76
Ccdc110-201ENSMUST00000095326 Rsf1E9PWW9 1441 aaKnown RBP10.33□□□□□ -0.76
Ccdc110-201ENSMUST00000095326 Top2bQ64511 1612 aa10.27□□□□□ -0.76
Ccdc110-201ENSMUST00000095326 Mrc2Q64449 1479 aa10.27□□□□□ -0.77
Ccdc110-201ENSMUST00000095326 Cux2P70298 1426 aa10.27□□□□□ -0.77
Ccdc110-201ENSMUST00000095326 Il27Q8K3I6 234 aa10.25□□□□□ -0.77
Ccdc110-201ENSMUST00000095326 Baz1bQ9Z277 1479 aa10.25□□□□□ -0.77
Ccdc110-201ENSMUST00000095326 Lamc3Q9R0B6 1581 aa10.24□□□□□ -0.77
Ccdc110-201ENSMUST00000095326 Npm1Q61937 292 aaKnown RBP10.21□□□□□ -0.77
Ccdc110-201ENSMUST00000095326 Ccdc88bQ4QRL3 1481 aa10.19□□□□□ -0.78
Ccdc110-201ENSMUST00000095326 Fmn1Q05860 1466 aa10.19□□□□□ -0.78
Ccdc110-201ENSMUST00000095326 TnnQ80Z71 1560 aa10.16□□□□□ -0.78
Ccdc110-201ENSMUST00000095326 Ccdc18Q640L5 1455 aa10.13□□□□□ -0.79
Ccdc110-201ENSMUST00000095326 Cep164Q5DU05 1446 aa10.12□□□□□ -0.79
Ccdc110-201ENSMUST00000095326 HrcG5E8J6 738 aa10.11□□□□□ -0.79
Ccdc110-201ENSMUST00000095326 Camsap1A2AHC3 1581 aa10.1□□□□□ -0.79
Ccdc110-201ENSMUST00000095326 Kif21aQ9QXL2 1672 aa10.09□□□□□ -0.79
Ccdc110-201ENSMUST00000095326 LrpprcQ6PB66 1392 aaKnown RBP10.07□□□□□ -0.8
Ccdc110-201ENSMUST00000095326 Dhx29Q6PGC1 1365 aaKnown RBP10.06□□□□□ -0.8
Ccdc110-201ENSMUST00000095326 Top2aQ01320 1528 aaKnown RBP10.02□□□□□ -0.81
Ccdc110-201ENSMUST00000095326 Lrriq1Q0P5X1 1673 aa10.01□□□□□ -0.81
Ccdc110-201ENSMUST00000095326 PogzQ8BZH4 1409 aaKnown RBP10□□□□□ -0.81
Ccdc110-201ENSMUST00000095326 Grin2bQ01097 1482 aa10□□□□□ -0.81
Ccdc110-201ENSMUST00000095326 Plb1Q3TTY0 1478 aa9.99□□□□□ -0.81
Ccdc110-201ENSMUST00000095326 Duox2A2AQ99 1517 aa9.98□□□□□ -0.81
Ccdc110-201ENSMUST00000095326 Urb2E9Q7L1 1524 aaKnown RBP9.97□□□□□ -0.81
Ccdc110-201ENSMUST00000095326 Crocc2F6XLV1 1638 aa9.96□□□□□ -0.81
Ccdc110-201ENSMUST00000095326 Npm2Q80W85 207 aa9.95□□□□□ -0.82
Ccdc110-201ENSMUST00000095326 PtprkP35822 1457 aa9.95□□□□□ -0.82
Ccdc110-201ENSMUST00000095326 Zeb1Q64318 1117 aa9.92□□□□□ -0.82
Ccdc110-201ENSMUST00000095326 Efcab5A0JP43 1406 aa9.92□□□□□ -0.82
Ccdc110-201ENSMUST00000095326 NrkQ9R0G8 1455 aa9.91□□□□□ -0.82
Ccdc110-201ENSMUST00000095326 Shroom4Q1W617 1475 aa9.9□□□□□ -0.83
Ccdc110-201ENSMUST00000095326 Samd9lQ69Z37 1561 aa9.89□□□□□ -0.83
Ccdc110-201ENSMUST00000095326 Rad54l2Q99NG0 1466 aa9.87□□□□□ -0.83
Ccdc110-201ENSMUST00000095326 Ift140E9PY46 1464 aa9.86□□□□□ -0.83
Ccdc110-201ENSMUST00000095326 Rapgef2Q8CHG7 1496 aa9.86□□□□□ -0.83
Ccdc110-201ENSMUST00000095326 Disp1Q3TDN0 1521 aa9.85□□□□□ -0.83
Ccdc110-201ENSMUST00000095326 Eif4g3Q80XI3 1579 aaKnown RBP9.84□□□□□ -0.83
Ccdc110-201ENSMUST00000095326 Myt1lP97500 1187 aa9.84□□□□□ -0.83
Ccdc110-201ENSMUST00000095326 Ppargc1bQ8VHJ7 1014 aa9.84□□□□□ -0.83
Ccdc110-201ENSMUST00000095326 Cep162Q6ZQ06 1403 aa9.79□□□□□ -0.84
Ccdc110-201ENSMUST00000095326 Grin2aP35436 1464 aa9.79□□□□□ -0.84
Ccdc110-201ENSMUST00000095326 Magi3Q9EQJ9 1476 aa9.78□□□□□ -0.84
Ccdc110-201ENSMUST00000095326 Mroh2bQ7M6Y6 1581 aa9.78□□□□□ -0.84
Ccdc110-201ENSMUST00000095326 Nup160Q9Z0W3 1402 aaKnown RBP9.77□□□□□ -0.84
Ccdc110-201ENSMUST00000095326 SynmQ70IV5 1561 aa9.77□□□□□ -0.84
Ccdc110-201ENSMUST00000095326 Arhgap35Q91YM2 1499 aa9.77□□□□□ -0.84
Ccdc110-201ENSMUST00000095326 Rusc2Q80U22 1514 aa9.77□□□□□ -0.85
Ccdc110-201ENSMUST00000095326 Pla2r1Q62028 1487 aa9.75□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 14.8 ms