RNA–Protein interactions for RNA: ENSMUST00000087342.12

Rps28-201, Transcript of 40S ribosomal protein S28, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rps28, Length 392 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28-201ENSMUST00000087342 Gm35339A0A140LHH9 1649 aa40.83■■■■■ 4.13
Rps28-201ENSMUST00000087342 NischQ80TM9 1593 aa40.02■■■■■ 4
Rps28-201ENSMUST00000087342 Abcc8B2RUS7 1588 aa38.85■■■■□ 3.81
Rps28-201ENSMUST00000087342 Abcc9P70170 1546 aa38.66■■■■□ 3.78
Rps28-201ENSMUST00000087342 ScribQ80U72 1612 aa37.82■■■■□ 3.64
Rps28-201ENSMUST00000087342 NacadQ5SWP3 1504 aa36.57■■■■□ 3.44
Rps28-201ENSMUST00000087342 Kdm5dQ62240 1548 aa36.44■■■■□ 3.42
Rps28-201ENSMUST00000087342 Sycp2Q9CUU3 1500 aa35.87■■■■□ 3.33
Rps28-201ENSMUST00000087342 Dcaf1Q80TR8 1506 aa35.62■■■■□ 3.29
Rps28-201ENSMUST00000087342 BicraF8VPZ9 1578 aa35.45■■■■□ 3.27
Rps28-201ENSMUST00000087342 Dnajc5bQ9CQ94 199 aa35.29■■■■□ 3.24
Rps28-201ENSMUST00000087342 Rb1cc1Q9ESK9 1588 aa34.85■■■■□ 3.17
Rps28-201ENSMUST00000087342 Pds5bQ4VA53 1446 aaKnown RBP34.64■■■■□ 3.14
Rps28-201ENSMUST00000087342 Thoc2B1AZI6 1594 aaKnown RBP34.56■■■■□ 3.12
Rps28-201ENSMUST00000087342 Baz1aO88379 1555 aa34.31■■■■□ 3.08
Rps28-201ENSMUST00000087342 Crybg2B7ZCC2 1516 aa34.26■■■■□ 3.08
Rps28-201ENSMUST00000087342 Ccdc180J3QNE4 1664 aa34.25■■■■□ 3.07
Rps28-201ENSMUST00000087342 Atad2bE9Q166 1460 aaKnown RBP34.16■■■■□ 3.06
Rps28-201ENSMUST00000087342 Rhox8Q6VSS7 320 aa34■■■■□ 3.03
Rps28-201ENSMUST00000087342 Cc2d2aQ8CFW7 1633 aa33.98■■■■□ 3.03
Rps28-201ENSMUST00000087342 Ercc6F8VPZ5 1481 aa33.91■■■■□ 3.02
Rps28-201ENSMUST00000087342 Zcchc6Q5BLK4 1491 aaKnown RBP33.91■■■■□ 3.02
Rps28-201ENSMUST00000087342 Smarca2Q6DIC0 1577 aa33.72■■■□□ 2.99
Rps28-201ENSMUST00000087342 Smarca4Q3TKT4 1613 aaKnown RBP33.66■■■□□ 2.98
Rps28-201ENSMUST00000087342 Fam135aQ6NS59 1506 aa33.65■■■□□ 2.98
Rps28-201ENSMUST00000087342 Iqgap2Q3UQ44 1575 aa33.56■■■□□ 2.96
Rps28-201ENSMUST00000087342 Wdr62Q3U3T8 1523 aa33.37■■■□□ 2.93
Rps28-201ENSMUST00000087342 Cecr2E9Q2Z1 1453 aa33.33■■■□□ 2.93
Rps28-201ENSMUST00000087342 Baz1bQ9Z277 1479 aa33.31■■■□□ 2.92
Rps28-201ENSMUST00000087342 Frmpd1A2AKB4 1549 aa33.3■■■□□ 2.92
Rps28-201ENSMUST00000087342 Phldb1Q6PDH0 1371 aaKnown RBP33.28■■■□□ 2.92
Rps28-201ENSMUST00000087342 Ubl4bQ9CQ84 188 aa33■■■□□ 2.87
Rps28-201ENSMUST00000087342 Mrc2Q64449 1479 aa32.88■■■□□ 2.85
Rps28-201ENSMUST00000087342 Unc13aQ4KUS2 1712 aa32.86■■■□□ 2.85
Rps28-201ENSMUST00000087342 Dnajc5P60904 198 aa32.6■■■□□ 2.81
Rps28-201ENSMUST00000087342 Cttnbp2B9EJA2 1648 aa32.53■■■□□ 2.8
Rps28-201ENSMUST00000087342 CftrP26361 1476 aa32.49■■■□□ 2.79
Rps28-201ENSMUST00000087342 Trim41Q5NCC3 630 aa32.42■■■□□ 2.78
Rps28-201ENSMUST00000087342 Synj1Q8CHC4 1574 aa32.37■■■□□ 2.77
Rps28-201ENSMUST00000087342 Rtl1Q7M732 1744 aa32.29■■■□□ 2.76
Rps28-201ENSMUST00000087342 Brd4Q9ESU6 1400 aaKnown RBP32.28■■■□□ 2.76
Rps28-201ENSMUST00000087342 Lrriq1Q0P5X1 1673 aa32.21■■■□□ 2.75
Rps28-201ENSMUST00000087342 Rsf1E9PWW9 1441 aaKnown RBP32.06■■■□□ 2.72
Rps28-201ENSMUST00000087342 Cux2P70298 1426 aa32.04■■■□□ 2.72
Rps28-201ENSMUST00000087342 Kif21aQ9QXL2 1672 aa31.96■■■□□ 2.71
Rps28-201ENSMUST00000087342 Esf1Q3V1V3 845 aaKnown RBP31.94■■■□□ 2.7
Rps28-201ENSMUST00000087342 Kif15Q6P9L6 1387 aa31.94■■■□□ 2.7
Rps28-201ENSMUST00000087342 Ccdc136Q3TVA9 1136 aa31.9■■■□□ 2.7
Rps28-201ENSMUST00000087342 Eif4g3Q80XI3 1579 aaKnown RBP31.76■■■□□ 2.67
Rps28-201ENSMUST00000087342 Lamc3Q9R0B6 1581 aa31.7■■■□□ 2.67
Rps28-201ENSMUST00000087342 Npm1Q61937 292 aaKnown RBP31.69■■■□□ 2.66
Rps28-201ENSMUST00000087342 Shroom2A2ALU4 1481 aa31.69■■■□□ 2.66
Rps28-201ENSMUST00000087342 Cep164Q5DU05 1446 aa31.55■■■□□ 2.64
Rps28-201ENSMUST00000087342 Urb2E9Q7L1 1524 aaKnown RBP31.4■■■□□ 2.62
Rps28-201ENSMUST00000087342 Col17a1Q07563 1470 aa31.34■■■□□ 2.61
Rps28-201ENSMUST00000087342 Plb1Q3TTY0 1478 aa31.33■■■□□ 2.61
Rps28-201ENSMUST00000087342 Dhx29Q6PGC1 1365 aaKnown RBP31.32■■■□□ 2.6
Rps28-201ENSMUST00000087342 Ccdc18Q640L5 1455 aa31.28■■■□□ 2.6
Rps28-201ENSMUST00000087342 Top2bQ64511 1612 aa31.27■■■□□ 2.6
Rps28-201ENSMUST00000087342 Pabpn1Q8CCS6 302 aaKnown RBP31.26■■■□□ 2.59
Rps28-201ENSMUST00000087342 Crocc2F6XLV1 1638 aa31.2■■■□□ 2.59
Rps28-201ENSMUST00000087342 Il27Q8K3I6 234 aa31.2■■■□□ 2.59
Rps28-201ENSMUST00000087342 LrpprcQ6PB66 1392 aaKnown RBP31.17■■■□□ 2.58
Rps28-201ENSMUST00000087342 TnnQ80Z71 1560 aa31.17■■■□□ 2.58
Rps28-201ENSMUST00000087342 Camsap1A2AHC3 1581 aa31.08■■■□□ 2.57
Rps28-201ENSMUST00000087342 Rusc2Q80U22 1514 aa31.07■■■□□ 2.56
Rps28-201ENSMUST00000087342 Ift140E9PY46 1464 aa31.06■■■□□ 2.56
Rps28-201ENSMUST00000087342 Pelp1Q9DBD5 1123 aaKnown RBP31.02■■■□□ 2.56
Rps28-201ENSMUST00000087342 Zcchc11B2RX14 1644 aaKnown RBP30.95■■■□□ 2.54
Rps28-201ENSMUST00000087342 PogzQ8BZH4 1409 aaKnown RBP30.94■■■□□ 2.54
Rps28-201ENSMUST00000087342 Golga3P55937 1487 aa30.9■■■□□ 2.54
Rps28-201ENSMUST00000087342 Cngb1E1AZ71 1325 aa30.8■■■□□ 2.52
Rps28-201ENSMUST00000087342 Duox2A2AQ99 1517 aa30.78■■■□□ 2.52
Rps28-201ENSMUST00000087342 Fmn1Q05860 1466 aa30.7■■■□□ 2.5
Rps28-201ENSMUST00000087342 Disp1Q3TDN0 1521 aa30.69■■■□□ 2.5
Rps28-201ENSMUST00000087342 Pbrm1Q8BSQ9 1634 aaKnown RBP30.65■■■□□ 2.5
Rps28-201ENSMUST00000087342 Cc2d2bA0A286YDU8 1405 aa30.62■■■□□ 2.49
Rps28-201ENSMUST00000087342 Grin2bQ01097 1482 aa30.59■■■□□ 2.49
Rps28-201ENSMUST00000087342 Nup160Q9Z0W3 1402 aaKnown RBP30.59■■■□□ 2.49
Rps28-201ENSMUST00000087342 Setd1bQ8CFT2 1985 aa30.59■■■□□ 2.49
Rps28-201ENSMUST00000087342 Samd9lQ69Z37 1561 aa30.54■■■□□ 2.48
Rps28-201ENSMUST00000087342 Adgrl3Q80TS3 1537 aa30.49■■■□□ 2.47
Rps28-201ENSMUST00000087342 Arhgef5E9Q7D5 1581 aa30.47■■■□□ 2.47
Rps28-201ENSMUST00000087342 Efcab5A0JP43 1406 aa30.42■■■□□ 2.46
Rps28-201ENSMUST00000087342 PtprkP35822 1457 aa30.42■■■□□ 2.46
Rps28-201ENSMUST00000087342 Pcdh10E9PXQ7 1057 aa30.39■■■□□ 2.46
Rps28-201ENSMUST00000087342 Ttbk1Q6PCN3 1308 aa30.39■■■□□ 2.46
Rps28-201ENSMUST00000087342 Cep170Q6A065 1588 aa30.38■■■□□ 2.45
Rps28-201ENSMUST00000087342 Fgd6Q69ZL1 1399 aa30.37■■■□□ 2.45
Rps28-201ENSMUST00000087342 AqrQ8CFQ3 1481 aaKnown RBP30.36■■■□□ 2.45
Rps28-201ENSMUST00000087342 Gapvd1Q6PAR5 1458 aa30.33■■■□□ 2.45
Rps28-201ENSMUST00000087342 Grin2aP35436 1464 aa30.32■■■□□ 2.44
Rps28-201ENSMUST00000087342 Rad54l2Q99NG0 1466 aa30.31■■■□□ 2.44
Rps28-201ENSMUST00000087342 Gm156Q58A37 223 aa30.28■■■□□ 2.44
Rps28-201ENSMUST00000087342 Magi3Q9EQJ9 1476 aa30.27■■■□□ 2.44
Rps28-201ENSMUST00000087342 PtprtQ99M80 1454 aa30.24■■■□□ 2.43
Rps28-201ENSMUST00000087342 AknaQ80VW7 1404 aa30.16■■■□□ 2.42
Rps28-201ENSMUST00000087342 Abcc1O35379 1528 aa30.13■■■□□ 2.41
Rps28-201ENSMUST00000087342 NrkQ9R0G8 1455 aa30.1■■■□□ 2.41
Rps28-201ENSMUST00000087342 Gpatch8A2A6A1 1505 aa30.06■■■□□ 2.4
Retrieved 100 of 22,080 RNA–protein pairs in 30.4 ms