RNA–Protein interactions for RNA: ENSMUST00000080428.12

Opn1sw-201, Transcript of Short-wave-sensitive opsin 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Opn1sw, Length 2,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Opn1sw-201ENSMUST00000080428 Gm35339A0A140LHH9 1649 aa19.32■□□□□ 0.68
Opn1sw-201ENSMUST00000080428 NischQ80TM9 1593 aa18.82■□□□□ 0.6
Opn1sw-201ENSMUST00000080428 Abcc8B2RUS7 1588 aa18.31■□□□□ 0.52
Opn1sw-201ENSMUST00000080428 Abcc9P70170 1546 aa18.25■□□□□ 0.51
Opn1sw-201ENSMUST00000080428 ScribQ80U72 1612 aa17.81■□□□□ 0.44
Opn1sw-201ENSMUST00000080428 NacadQ5SWP3 1504 aa17.2■□□□□ 0.34
Opn1sw-201ENSMUST00000080428 Kdm5dQ62240 1548 aa17.13■□□□□ 0.33
Opn1sw-201ENSMUST00000080428 Sycp2Q9CUU3 1500 aa16.88■□□□□ 0.29
Opn1sw-201ENSMUST00000080428 Dcaf1Q80TR8 1506 aa16.86■□□□□ 0.29
Opn1sw-201ENSMUST00000080428 BicraF8VPZ9 1578 aa16.69■□□□□ 0.26
Opn1sw-201ENSMUST00000080428 Dnajc5bQ9CQ94 199 aa16.44■□□□□ 0.22
Opn1sw-201ENSMUST00000080428 Rb1cc1Q9ESK9 1588 aa16.39■□□□□ 0.21
Opn1sw-201ENSMUST00000080428 Thoc2B1AZI6 1594 aaKnown RBP16.27■□□□□ 0.19
Opn1sw-201ENSMUST00000080428 Pds5bQ4VA53 1446 aaKnown RBP16.25■□□□□ 0.19
Opn1sw-201ENSMUST00000080428 Ccdc180J3QNE4 1664 aa16.23■□□□□ 0.19
Opn1sw-201ENSMUST00000080428 Crybg2B7ZCC2 1516 aa16.2■□□□□ 0.18
Opn1sw-201ENSMUST00000080428 Baz1aO88379 1555 aa16.17■□□□□ 0.18
Opn1sw-201ENSMUST00000080428 Atad2bE9Q166 1460 aaKnown RBP16.06■□□□□ 0.16
Opn1sw-201ENSMUST00000080428 Cc2d2aQ8CFW7 1633 aa15.92■□□□□ 0.14
Opn1sw-201ENSMUST00000080428 Ercc6F8VPZ5 1481 aa15.88■□□□□ 0.13
Opn1sw-201ENSMUST00000080428 Zcchc6Q5BLK4 1491 aaKnown RBP15.86■□□□□ 0.13
Opn1sw-201ENSMUST00000080428 Fam135aQ6NS59 1506 aa15.85■□□□□ 0.13
Opn1sw-201ENSMUST00000080428 Smarca2Q6DIC0 1577 aa15.84■□□□□ 0.13
Opn1sw-201ENSMUST00000080428 Smarca4Q3TKT4 1613 aaKnown RBP15.83■□□□□ 0.13
Opn1sw-201ENSMUST00000080428 Rhox8Q6VSS7 320 aa15.8■□□□□ 0.12
Opn1sw-201ENSMUST00000080428 Iqgap2Q3UQ44 1575 aa15.77■□□□□ 0.11
Opn1sw-201ENSMUST00000080428 Baz1bQ9Z277 1479 aa15.75■□□□□ 0.11
Opn1sw-201ENSMUST00000080428 Wdr62Q3U3T8 1523 aa15.7■□□□□ 0.1
Opn1sw-201ENSMUST00000080428 Cecr2E9Q2Z1 1453 aa15.66■□□□□ 0.1
Opn1sw-201ENSMUST00000080428 Frmpd1A2AKB4 1549 aa15.64■□□□□ 0.1
Opn1sw-201ENSMUST00000080428 Phldb1Q6PDH0 1371 aaKnown RBP15.61■□□□□ 0.09
Opn1sw-201ENSMUST00000080428 Unc13aQ4KUS2 1712 aa15.46■□□□□ 0.06
Opn1sw-201ENSMUST00000080428 Mrc2Q64449 1479 aa15.41■□□□□ 0.06
Opn1sw-201ENSMUST00000080428 Ubl4bQ9CQ84 188 aa15.36■□□□□ 0.05
Opn1sw-201ENSMUST00000080428 Rpgrip1Q9EPQ2 1331 aa15.33■□□□□ 0.04
Opn1sw-201ENSMUST00000080428 Cttnbp2B9EJA2 1648 aa15.32■□□□□ 0.04
Opn1sw-201ENSMUST00000080428 CftrP26361 1476 aa15.29■□□□□ 0.04
Opn1sw-201ENSMUST00000080428 Synj1Q8CHC4 1574 aa15.22■□□□□ 0.03
Opn1sw-201ENSMUST00000080428 Rtl1Q7M732 1744 aa15.21■□□□□ 0.02
Opn1sw-201ENSMUST00000080428 Dnajc5P60904 198 aa15.18■□□□□ 0.02
Opn1sw-201ENSMUST00000080428 Brd4Q9ESU6 1400 aaKnown RBP15.17■□□□□ 0.02
Opn1sw-201ENSMUST00000080428 Lrriq1Q0P5X1 1673 aa15.1■□□□□ 0.01
Opn1sw-201ENSMUST00000080428 Rsf1E9PWW9 1441 aaKnown RBP15.03■□□□□ -0
Opn1sw-201ENSMUST00000080428 Cux2P70298 1426 aa15□□□□□ -0.01
Opn1sw-201ENSMUST00000080428 Kif21aQ9QXL2 1672 aa14.98□□□□□ -0.01
Opn1sw-201ENSMUST00000080428 Trim41Q5NCC3 630 aa14.95□□□□□ -0.02
Opn1sw-201ENSMUST00000080428 Lamc3Q9R0B6 1581 aa14.94□□□□□ -0.02
Opn1sw-201ENSMUST00000080428 Kif15Q6P9L6 1387 aa14.93□□□□□ -0.02
Opn1sw-201ENSMUST00000080428 Eif4g3Q80XI3 1579 aaKnown RBP14.92□□□□□ -0.02
Opn1sw-201ENSMUST00000080428 Shroom2A2ALU4 1481 aa14.88□□□□□ -0.03
Opn1sw-201ENSMUST00000080428 Ccdc136Q3TVA9 1136 aa14.82□□□□□ -0.04
Opn1sw-201ENSMUST00000080428 Esf1Q3V1V3 845 aaKnown RBP14.82□□□□□ -0.04
Opn1sw-201ENSMUST00000080428 Cep164Q5DU05 1446 aa14.78□□□□□ -0.04
Opn1sw-201ENSMUST00000080428 Npm1Q61937 292 aaKnown RBP14.75□□□□□ -0.05
Opn1sw-201ENSMUST00000080428 Urb2E9Q7L1 1524 aaKnown RBP14.74□□□□□ -0.05
Opn1sw-201ENSMUST00000080428 TnnQ80Z71 1560 aa14.73□□□□□ -0.05
Opn1sw-201ENSMUST00000080428 Col17a1Q07563 1470 aa14.68□□□□□ -0.06
Opn1sw-201ENSMUST00000080428 Dhx29Q6PGC1 1365 aaKnown RBP14.67□□□□□ -0.06
Opn1sw-201ENSMUST00000080428 Plb1Q3TTY0 1478 aa14.67□□□□□ -0.06
Opn1sw-201ENSMUST00000080428 Ccdc18Q640L5 1455 aa14.65□□□□□ -0.06
Opn1sw-201ENSMUST00000080428 Crocc2F6XLV1 1638 aa14.64□□□□□ -0.07
Opn1sw-201ENSMUST00000080428 Camsap1A2AHC3 1581 aa14.62□□□□□ -0.07
Opn1sw-201ENSMUST00000080428 Top2bQ64511 1612 aa14.62□□□□□ -0.07
Opn1sw-201ENSMUST00000080428 Pcgf6Q99NA9 353 aa14.62□□□□□ -0.07
Opn1sw-201ENSMUST00000080428 LrpprcQ6PB66 1392 aaKnown RBP14.62□□□□□ -0.07
Opn1sw-201ENSMUST00000080428 Rusc2Q80U22 1514 aa14.6□□□□□ -0.07
Opn1sw-201ENSMUST00000080428 Ift140E9PY46 1464 aa14.58□□□□□ -0.07
Opn1sw-201ENSMUST00000080428 Pabpn1Q8CCS6 302 aaKnown RBP14.55□□□□□ -0.08
Opn1sw-201ENSMUST00000080428 Golga3P55937 1487 aa14.54□□□□□ -0.08
Opn1sw-201ENSMUST00000080428 PogzQ8BZH4 1409 aaKnown RBP14.54□□□□□ -0.08
Opn1sw-201ENSMUST00000080428 Zcchc11B2RX14 1644 aaKnown RBP14.53□□□□□ -0.08
Opn1sw-201ENSMUST00000080428 Il27Q8K3I6 234 aa14.46□□□□□ -0.09
Opn1sw-201ENSMUST00000080428 Fmn1Q05860 1466 aa14.45□□□□□ -0.1
Opn1sw-201ENSMUST00000080428 Pbrm1Q8BSQ9 1634 aaKnown RBP14.44□□□□□ -0.1
Opn1sw-201ENSMUST00000080428 Duox2A2AQ99 1517 aa14.44□□□□□ -0.1
Opn1sw-201ENSMUST00000080428 Acin1Q9JIX8 1338 aaKnown RBP14.43□□□□□ -0.1
Opn1sw-201ENSMUST00000080428 Myt1Q8CFC2 1127 aa14.43□□□□□ -0.1
Opn1sw-201ENSMUST00000080428 Disp1Q3TDN0 1521 aa14.42□□□□□ -0.1
Opn1sw-201ENSMUST00000080428 Nup160Q9Z0W3 1402 aaKnown RBP14.4□□□□□ -0.1
Opn1sw-201ENSMUST00000080428 Grin2bQ01097 1482 aa14.38□□□□□ -0.11
Opn1sw-201ENSMUST00000080428 Cc2d2bA0A286YDU8 1405 aa14.37□□□□□ -0.11
Opn1sw-201ENSMUST00000080428 Setd1bQ8CFT2 1985 aa14.37□□□□□ -0.11
Opn1sw-201ENSMUST00000080428 Samd9lQ69Z37 1561 aa14.35□□□□□ -0.11
Opn1sw-201ENSMUST00000080428 Pelp1Q9DBD5 1123 aaKnown RBP14.34□□□□□ -0.11
Opn1sw-201ENSMUST00000080428 Cngb1E1AZ71 1325 aa14.31□□□□□ -0.12
Opn1sw-201ENSMUST00000080428 Efcab5A0JP43 1406 aa14.31□□□□□ -0.12
Opn1sw-201ENSMUST00000080428 Gpatch8A2A6A1 1505 aa14.29□□□□□ -0.12
Opn1sw-201ENSMUST00000080428 Adgrl3Q80TS3 1537 aa14.27□□□□□ -0.12
Opn1sw-201ENSMUST00000080428 AqrQ8CFQ3 1481 aaKnown RBP14.27□□□□□ -0.13
Opn1sw-201ENSMUST00000080428 Arhgef5E9Q7D5 1581 aa14.25□□□□□ -0.13
Opn1sw-201ENSMUST00000080428 Magi3Q9EQJ9 1476 aa14.23□□□□□ -0.13
Opn1sw-201ENSMUST00000080428 Cep170Q6A065 1588 aa14.23□□□□□ -0.13
Opn1sw-201ENSMUST00000080428 Fgd6Q69ZL1 1399 aa14.23□□□□□ -0.13
Opn1sw-201ENSMUST00000080428 Grin2aP35436 1464 aa14.23□□□□□ -0.13
Opn1sw-201ENSMUST00000080428 Las1lA2BE28 776 aaKnown RBP14.22□□□□□ -0.13
Opn1sw-201ENSMUST00000080428 PtprkP35822 1457 aa14.22□□□□□ -0.13
Opn1sw-201ENSMUST00000080428 Gapvd1Q6PAR5 1458 aa14.19□□□□□ -0.14
Opn1sw-201ENSMUST00000080428 Rad54l2Q99NG0 1466 aa14.19□□□□□ -0.14
Opn1sw-201ENSMUST00000080428 NrkQ9R0G8 1455 aa14.18□□□□□ -0.14
Opn1sw-201ENSMUST00000080428 PtprtQ99M80 1454 aa14.15□□□□□ -0.14
Retrieved 100 of 22,080 RNA–protein pairs in 90.5 ms