RNA–Protein interactions for RNA: ENSMUST00000079213.5

Prpf38a-201, Transcript of Pre-mRNA-splicing factor 38A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prpf38a, Length 1,516 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38a-201ENSMUST00000079213 Gm35339A0A140LHH9 1649 aa21.16■□□□□ 0.98
Prpf38a-201ENSMUST00000079213 NischQ80TM9 1593 aa20.68■□□□□ 0.9
Prpf38a-201ENSMUST00000079213 Abcc9P70170 1546 aa20.42■□□□□ 0.86
Prpf38a-201ENSMUST00000079213 Abcc8B2RUS7 1588 aa20.13■□□□□ 0.81
Prpf38a-201ENSMUST00000079213 Chic1Q8CBW7 227 aa19.83■□□□□ 0.77
Prpf38a-201ENSMUST00000079213 ScribQ80U72 1612 aa19.79■□□□□ 0.76
Prpf38a-201ENSMUST00000079213 Mapk8ip2Q9ERE9 830 aa19.5■□□□□ 0.71
Prpf38a-201ENSMUST00000079213 NacadQ5SWP3 1504 aa19.03■□□□□ 0.64
Prpf38a-201ENSMUST00000079213 Kdm5dQ62240 1548 aa18.99■□□□□ 0.63
Prpf38a-201ENSMUST00000079213 Dnajc5bQ9CQ94 199 aa18.96■□□□□ 0.63
Prpf38a-201ENSMUST00000079213 Sycp2Q9CUU3 1500 aa18.7■□□□□ 0.58
Prpf38a-201ENSMUST00000079213 BicraF8VPZ9 1578 aa18.57■□□□□ 0.56
Prpf38a-201ENSMUST00000079213 Dcaf1Q80TR8 1506 aa18.36■□□□□ 0.53
Prpf38a-201ENSMUST00000079213 Thoc2B1AZI6 1594 aaKnown RBP18.21■□□□□ 0.51
Prpf38a-201ENSMUST00000079213 Pds5bQ4VA53 1446 aaKnown RBP18.11■□□□□ 0.49
Prpf38a-201ENSMUST00000079213 Rb1cc1Q9ESK9 1588 aa18.01■□□□□ 0.47
Prpf38a-201ENSMUST00000079213 Cc2d2aQ8CFW7 1633 aa17.95■□□□□ 0.46
Prpf38a-201ENSMUST00000079213 Atad2bE9Q166 1460 aaKnown RBP17.82■□□□□ 0.44
Prpf38a-201ENSMUST00000079213 Phf23Q8BSN5 401 aa17.8■□□□□ 0.44
Prpf38a-201ENSMUST00000079213 Ercc6F8VPZ5 1481 aa17.76■□□□□ 0.43
Prpf38a-201ENSMUST00000079213 Baz1aO88379 1555 aa17.66■□□□□ 0.42
Prpf38a-201ENSMUST00000079213 Fam135aQ6NS59 1506 aa17.65■□□□□ 0.42
Prpf38a-201ENSMUST00000079213 Dnajc5P60904 198 aa17.65■□□□□ 0.42
Prpf38a-201ENSMUST00000079213 Smarca2Q6DIC0 1577 aa17.6■□□□□ 0.41
Prpf38a-201ENSMUST00000079213 Crybg2B7ZCC2 1516 aa17.58■□□□□ 0.4
Prpf38a-201ENSMUST00000079213 Zcchc6Q5BLK4 1491 aaKnown RBP17.58■□□□□ 0.4
Prpf38a-201ENSMUST00000079213 Ccdc180J3QNE4 1664 aa17.54■□□□□ 0.4
Prpf38a-201ENSMUST00000079213 Iqgap2Q3UQ44 1575 aa17.5■□□□□ 0.39
Prpf38a-201ENSMUST00000079213 Smarca4Q3TKT4 1613 aaKnown RBP17.5■□□□□ 0.39
Prpf38a-201ENSMUST00000079213 Trim41Q5NCC3 630 aa17.48■□□□□ 0.39
Prpf38a-201ENSMUST00000079213 Rhox8Q6VSS7 320 aa17.42■□□□□ 0.38
Prpf38a-201ENSMUST00000079213 Wdr62Q3U3T8 1523 aa17.42■□□□□ 0.38
Prpf38a-201ENSMUST00000079213 Frmpd1A2AKB4 1549 aa17.41■□□□□ 0.38
Prpf38a-201ENSMUST00000079213 Phldb1Q6PDH0 1371 aaKnown RBP17.4■□□□□ 0.38
Prpf38a-201ENSMUST00000079213 Ubl4bQ9CQ84 188 aa17.34■□□□□ 0.37
Prpf38a-201ENSMUST00000079213 Cecr2E9Q2Z1 1453 aa17.32■□□□□ 0.36
Prpf38a-201ENSMUST00000079213 Baz1bQ9Z277 1479 aa17.29■□□□□ 0.36
Prpf38a-201ENSMUST00000079213 Mrc2Q64449 1479 aa17.26■□□□□ 0.35
Prpf38a-201ENSMUST00000079213 Unc13aQ4KUS2 1712 aa17.25■□□□□ 0.35
Prpf38a-201ENSMUST00000079213 Plppr3Q7TPB0 716 aa17.06■□□□□ 0.32
Prpf38a-201ENSMUST00000079213 Gab3Q8BSM5 595 aa17.01■□□□□ 0.31
Prpf38a-201ENSMUST00000079213 Lrriq1Q0P5X1 1673 aa17■□□□□ 0.31
Prpf38a-201ENSMUST00000079213 Rsf1E9PWW9 1441 aaKnown RBP16.85■□□□□ 0.29
Prpf38a-201ENSMUST00000079213 Cttnbp2B9EJA2 1648 aa16.79■□□□□ 0.28
Prpf38a-201ENSMUST00000079213 Kif21aQ9QXL2 1672 aa16.79■□□□□ 0.28
Prpf38a-201ENSMUST00000079213 CftrP26361 1476 aa16.77■□□□□ 0.27
Prpf38a-201ENSMUST00000079213 Shroom2A2ALU4 1481 aa16.76■□□□□ 0.27
Prpf38a-201ENSMUST00000079213 Synj1Q8CHC4 1574 aa16.74■□□□□ 0.27
Prpf38a-201ENSMUST00000079213 Cux2P70298 1426 aa16.73■□□□□ 0.27
Prpf38a-201ENSMUST00000079213 Eif4g3Q80XI3 1579 aaKnown RBP16.7■□□□□ 0.26
Prpf38a-201ENSMUST00000079213 Col17a1Q07563 1470 aa16.69■□□□□ 0.26
Prpf38a-201ENSMUST00000079213 Kif15Q6P9L6 1387 aa16.62■□□□□ 0.25
Prpf38a-201ENSMUST00000079213 Pabpn1Q8CCS6 302 aaKnown RBP16.55■□□□□ 0.24
Prpf38a-201ENSMUST00000079213 Brd4Q9ESU6 1400 aaKnown RBP16.55■□□□□ 0.24
Prpf38a-201ENSMUST00000079213 Esf1Q3V1V3 845 aaKnown RBP16.55■□□□□ 0.24
Prpf38a-201ENSMUST00000079213 Top2bQ64511 1612 aa16.54■□□□□ 0.24
Prpf38a-201ENSMUST00000079213 Npm1Q61937 292 aaKnown RBP16.53■□□□□ 0.24
Prpf38a-201ENSMUST00000079213 Pelp1Q9DBD5 1123 aaKnown RBP16.48■□□□□ 0.23
Prpf38a-201ENSMUST00000079213 Urb2E9Q7L1 1524 aaKnown RBP16.45■□□□□ 0.22
Prpf38a-201ENSMUST00000079213 Rtl1Q7M732 1744 aa16.44■□□□□ 0.22
Prpf38a-201ENSMUST00000079213 Ccdc136Q3TVA9 1136 aa16.43■□□□□ 0.22
Prpf38a-201ENSMUST00000079213 Lamc3Q9R0B6 1581 aa16.41■□□□□ 0.22
Prpf38a-201ENSMUST00000079213 Plb1Q3TTY0 1478 aa16.4■□□□□ 0.22
Prpf38a-201ENSMUST00000079213 Cep164Q5DU05 1446 aa16.39■□□□□ 0.21
Prpf38a-201ENSMUST00000079213 Pcdh10E9PXQ7 1057 aa16.34■□□□□ 0.21
Prpf38a-201ENSMUST00000079213 Zcchc11B2RX14 1644 aaKnown RBP16.33■□□□□ 0.2
Prpf38a-201ENSMUST00000079213 Dhx29Q6PGC1 1365 aaKnown RBP16.32■□□□□ 0.2
Prpf38a-201ENSMUST00000079213 Il27Q8K3I6 234 aa16.3■□□□□ 0.2
Prpf38a-201ENSMUST00000079213 Senp3Q9EP97 568 aaKnown RBP16.27■□□□□ 0.2
Prpf38a-201ENSMUST00000079213 Crocc2F6XLV1 1638 aa16.27■□□□□ 0.19
Prpf38a-201ENSMUST00000079213 Rusc2Q80U22 1514 aa16.26■□□□□ 0.19
Prpf38a-201ENSMUST00000079213 Arhgef5E9Q7D5 1581 aa16.2■□□□□ 0.18
Prpf38a-201ENSMUST00000079213 Ttbk1Q6PCN3 1308 aa16.19■□□□□ 0.18
Prpf38a-201ENSMUST00000079213 Ccdc18Q640L5 1455 aa16.18■□□□□ 0.18
Prpf38a-201ENSMUST00000079213 LrpprcQ6PB66 1392 aaKnown RBP16.18■□□□□ 0.18
Prpf38a-201ENSMUST00000079213 Ift140E9PY46 1464 aa16.17■□□□□ 0.18
Prpf38a-201ENSMUST00000079213 Adgrl3Q80TS3 1537 aa16.12■□□□□ 0.17
Prpf38a-201ENSMUST00000079213 Camsap1A2AHC3 1581 aa16.08■□□□□ 0.16
Prpf38a-201ENSMUST00000079213 Setd1bQ8CFT2 1985 aa16.06■□□□□ 0.16
Prpf38a-201ENSMUST00000079213 TnnQ80Z71 1560 aa16.06■□□□□ 0.16
Prpf38a-201ENSMUST00000079213 PogzQ8BZH4 1409 aaKnown RBP16.03■□□□□ 0.16
Prpf38a-201ENSMUST00000079213 PtprkP35822 1457 aa16.02■□□□□ 0.16
Prpf38a-201ENSMUST00000079213 Cep170Q6A065 1588 aa16.01■□□□□ 0.15
Prpf38a-201ENSMUST00000079213 Gm156Q58A37 223 aa15.99■□□□□ 0.15
Prpf38a-201ENSMUST00000079213 Disp1Q3TDN0 1521 aa15.99■□□□□ 0.15
Prpf38a-201ENSMUST00000079213 PtprtQ99M80 1454 aa15.99■□□□□ 0.15
Prpf38a-201ENSMUST00000079213 Duox2A2AQ99 1517 aa15.97■□□□□ 0.15
Prpf38a-201ENSMUST00000079213 Gapvd1Q6PAR5 1458 aa15.96■□□□□ 0.15
Prpf38a-201ENSMUST00000079213 Golga3P55937 1487 aa15.93■□□□□ 0.14
Prpf38a-201ENSMUST00000079213 Pbrm1Q8BSQ9 1634 aaKnown RBP15.91■□□□□ 0.14
Prpf38a-201ENSMUST00000079213 Cc2d2bA0A286YDU8 1405 aa15.9■□□□□ 0.14
Prpf38a-201ENSMUST00000079213 Nup160Q9Z0W3 1402 aaKnown RBP15.9■□□□□ 0.14
Prpf38a-201ENSMUST00000079213 Samd9lQ69Z37 1561 aa15.87■□□□□ 0.13
Prpf38a-201ENSMUST00000079213 Cngb1E1AZ71 1325 aa15.87■□□□□ 0.13
Prpf38a-201ENSMUST00000079213 Fgd6Q69ZL1 1399 aa15.85■□□□□ 0.13
Prpf38a-201ENSMUST00000079213 Pprc1Q6NZN1 1644 aa15.84■□□□□ 0.13
Prpf38a-201ENSMUST00000079213 AknaQ80VW7 1404 aa15.81■□□□□ 0.12
Prpf38a-201ENSMUST00000079213 AqrQ8CFQ3 1481 aaKnown RBP15.8■□□□□ 0.12
Prpf38a-201ENSMUST00000079213 Grin2bQ01097 1482 aa15.79■□□□□ 0.12
Prpf38a-201ENSMUST00000079213 Rad54l2Q99NG0 1466 aa15.79■□□□□ 0.12
Retrieved 100 of 22,080 RNA–protein pairs in 9.4 ms