RNA–Protein interactions for RNA: ENSMUST00000078271.3

Pcdhb5-201, Transcript of Protocadherin beta 5, mousemouse

APPRIS P1 BASIC

Gene Pcdhb5, Length 3,535 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5-201ENSMUST00000078271 NischQ80TM9 1593 aa19.51■□□□□ 0.71
Pcdhb5-201ENSMUST00000078271 Gm35339A0A140LHH9 1649 aa19.45■□□□□ 0.7
Pcdhb5-201ENSMUST00000078271 Abcc9P70170 1546 aa19.01■□□□□ 0.63
Pcdhb5-201ENSMUST00000078271 Abcc8B2RUS7 1588 aa18.63■□□□□ 0.57
Pcdhb5-201ENSMUST00000078271 ScribQ80U72 1612 aa17.58■□□□□ 0.4
Pcdhb5-201ENSMUST00000078271 Rhox8Q6VSS7 320 aa17.56■□□□□ 0.4
Pcdhb5-201ENSMUST00000078271 Rtl1Q7M732 1744 aa17.5■□□□□ 0.39
Pcdhb5-201ENSMUST00000078271 Dcaf1Q80TR8 1506 aa17.29■□□□□ 0.36
Pcdhb5-201ENSMUST00000078271 Zcchc6Q5BLK4 1491 aaKnown RBP17.11■□□□□ 0.33
Pcdhb5-201ENSMUST00000078271 Ccdc180J3QNE4 1664 aa17.1■□□□□ 0.33
Pcdhb5-201ENSMUST00000078271 Rb1cc1Q9ESK9 1588 aa17.1■□□□□ 0.33
Pcdhb5-201ENSMUST00000078271 Kdm5dQ62240 1548 aa17.09■□□□□ 0.33
Pcdhb5-201ENSMUST00000078271 Baz1aO88379 1555 aa16.88■□□□□ 0.29
Pcdhb5-201ENSMUST00000078271 NacadQ5SWP3 1504 aa16.85■□□□□ 0.29
Pcdhb5-201ENSMUST00000078271 Sycp2Q9CUU3 1500 aa16.56■□□□□ 0.24
Pcdhb5-201ENSMUST00000078271 Smarca2Q6DIC0 1577 aa16.56■□□□□ 0.24
Pcdhb5-201ENSMUST00000078271 Crybg2B7ZCC2 1516 aa16.55■□□□□ 0.24
Pcdhb5-201ENSMUST00000078271 Ccdc136Q3TVA9 1136 aa16.41■□□□□ 0.22
Pcdhb5-201ENSMUST00000078271 BicraF8VPZ9 1578 aa16.34■□□□□ 0.21
Pcdhb5-201ENSMUST00000078271 Cecr2E9Q2Z1 1453 aa16.18■□□□□ 0.18
Pcdhb5-201ENSMUST00000078271 HrcG5E8J6 738 aa16.17■□□□□ 0.18
Pcdhb5-201ENSMUST00000078271 Synj1Q8CHC4 1574 aa16.02■□□□□ 0.16
Pcdhb5-201ENSMUST00000078271 Rpgrip1Q9EPQ2 1331 aa16.01■□□□□ 0.15
Pcdhb5-201ENSMUST00000078271 Trim41Q5NCC3 630 aa15.96■□□□□ 0.15
Pcdhb5-201ENSMUST00000078271 Brd4Q9ESU6 1400 aaKnown RBP15.92■□□□□ 0.14
Pcdhb5-201ENSMUST00000078271 Cep164Q5DU05 1446 aa15.87■□□□□ 0.13
Pcdhb5-201ENSMUST00000078271 CftrP26361 1476 aa15.86■□□□□ 0.13
Pcdhb5-201ENSMUST00000078271 Rsf1E9PWW9 1441 aaKnown RBP15.84■□□□□ 0.13
Pcdhb5-201ENSMUST00000078271 Cttnbp2B9EJA2 1648 aa15.82■□□□□ 0.12
Pcdhb5-201ENSMUST00000078271 Top2bQ64511 1612 aa15.82■□□□□ 0.12
Pcdhb5-201ENSMUST00000078271 Smarca4Q3TKT4 1613 aaKnown RBP15.79■□□□□ 0.12
Pcdhb5-201ENSMUST00000078271 Ccdc88bQ4QRL3 1481 aa15.78■□□□□ 0.12
Pcdhb5-201ENSMUST00000078271 Golga3P55937 1487 aa15.78■□□□□ 0.12
Pcdhb5-201ENSMUST00000078271 Chic1Q8CBW7 227 aa15.74■□□□□ 0.11
Pcdhb5-201ENSMUST00000078271 Ehmt2Q9Z148 1263 aaKnown RBP15.69■□□□□ 0.1
Pcdhb5-201ENSMUST00000078271 Cc2d2aQ8CFW7 1633 aa15.69■□□□□ 0.1
Pcdhb5-201ENSMUST00000078271 Cngb1E1AZ71 1325 aa15.64■□□□□ 0.09
Pcdhb5-201ENSMUST00000078271 Iqgap2Q3UQ44 1575 aa15.61■□□□□ 0.09
Pcdhb5-201ENSMUST00000078271 Acin1Q9JIX8 1338 aaKnown RBP15.59■□□□□ 0.09
Pcdhb5-201ENSMUST00000078271 Atad2bE9Q166 1460 aaKnown RBP15.46■□□□□ 0.07
Pcdhb5-201ENSMUST00000078271 Top2aQ01320 1528 aaKnown RBP15.42■□□□□ 0.06
Pcdhb5-201ENSMUST00000078271 Esf1Q3V1V3 845 aaKnown RBP15.41■□□□□ 0.06
Pcdhb5-201ENSMUST00000078271 Gab3Q8BSM5 595 aa15.4■□□□□ 0.06
Pcdhb5-201ENSMUST00000078271 Fmn1Q05860 1466 aa15.39■□□□□ 0.05
Pcdhb5-201ENSMUST00000078271 Unc13aQ4KUS2 1712 aa15.39■□□□□ 0.05
Pcdhb5-201ENSMUST00000078271 TnnQ80Z71 1560 aa15.36■□□□□ 0.05
Pcdhb5-201ENSMUST00000078271 Pds5bQ4VA53 1446 aaKnown RBP15.34■□□□□ 0.05
Pcdhb5-201ENSMUST00000078271 Wdr62Q3U3T8 1523 aa15.34■□□□□ 0.05
Pcdhb5-201ENSMUST00000078271 Frmpd1A2AKB4 1549 aa15.33■□□□□ 0.04
Pcdhb5-201ENSMUST00000078271 Rapgef2Q8CHG7 1496 aa15.32■□□□□ 0.04
Pcdhb5-201ENSMUST00000078271 Eif4g1Q6NZJ6 1600 aaKnown RBP15.27■□□□□ 0.03
Pcdhb5-201ENSMUST00000078271 Pcgf6Q99NA9 353 aa15.19■□□□□ 0.02
Pcdhb5-201ENSMUST00000078271 Lamc3Q9R0B6 1581 aa15.18■□□□□ 0.02
Pcdhb5-201ENSMUST00000078271 Cep162Q6ZQ06 1403 aa15.13■□□□□ 0.01
Pcdhb5-201ENSMUST00000078271 Thoc2B1AZI6 1594 aaKnown RBP15.11■□□□□ 0.01
Pcdhb5-201ENSMUST00000078271 PtprkP35822 1457 aa15.07■□□□□ 0
Pcdhb5-201ENSMUST00000078271 Camsap1A2AHC3 1581 aa15.05■□□□□ -0
Pcdhb5-201ENSMUST00000078271 Ercc6F8VPZ5 1481 aa15.05■□□□□ -0
Pcdhb5-201ENSMUST00000078271 Arhgap35Q91YM2 1499 aa15□□□□□ -0.01
Pcdhb5-201ENSMUST00000078271 NrkQ9R0G8 1455 aa15□□□□□ -0.01
Pcdhb5-201ENSMUST00000078271 Kif15Q6P9L6 1387 aa14.95□□□□□ -0.02
Pcdhb5-201ENSMUST00000078271 Mier1Q5UAK0 511 aa14.92□□□□□ -0.02
Pcdhb5-201ENSMUST00000078271 Shroom4Q1W617 1475 aa14.91□□□□□ -0.02
Pcdhb5-201ENSMUST00000078271 Grin2bQ01097 1482 aa14.89□□□□□ -0.03
Pcdhb5-201ENSMUST00000078271 Fam135aQ6NS59 1506 aa14.88□□□□□ -0.03
Pcdhb5-201ENSMUST00000078271 Myt1lP97500 1187 aa14.83□□□□□ -0.03
Pcdhb5-201ENSMUST00000078271 Phldb1Q6PDH0 1371 aaKnown RBP14.83□□□□□ -0.04
Pcdhb5-201ENSMUST00000078271 Arap1Q4LDD4 1452 aa14.83□□□□□ -0.04
Pcdhb5-201ENSMUST00000078271 Map3k1P53349 1493 aa14.81□□□□□ -0.04
Pcdhb5-201ENSMUST00000078271 Npm2Q80W85 207 aa14.79□□□□□ -0.04
Pcdhb5-201ENSMUST00000078271 Mroh2bQ7M6Y6 1581 aa14.78□□□□□ -0.04
Pcdhb5-201ENSMUST00000078271 Erich3F6QRE9 1637 aa14.77□□□□□ -0.04
Pcdhb5-201ENSMUST00000078271 Ccdc18Q640L5 1455 aa14.77□□□□□ -0.05
Pcdhb5-201ENSMUST00000078271 Il27Q8K3I6 234 aa14.76□□□□□ -0.05
Pcdhb5-201ENSMUST00000078271 Cux2P70298 1426 aa14.76□□□□□ -0.05
Pcdhb5-201ENSMUST00000078271 Clip1Q922J3 1391 aa14.76□□□□□ -0.05
Pcdhb5-201ENSMUST00000078271 Arhgef5E9Q7D5 1581 aa14.75□□□□□ -0.05
Pcdhb5-201ENSMUST00000078271 Ankrd26Q811D2 1581 aa14.75□□□□□ -0.05
Pcdhb5-201ENSMUST00000078271 Supt5hO55201 1082 aaKnown RBP14.73□□□□□ -0.05
Pcdhb5-201ENSMUST00000078271 UbtfP25976 765 aaKnown RBP14.73□□□□□ -0.05
Pcdhb5-201ENSMUST00000078271 Ncapd3Q6ZQK0 1506 aa14.72□□□□□ -0.05
Pcdhb5-201ENSMUST00000078271 Baz1bQ9Z277 1479 aa14.7□□□□□ -0.06
Pcdhb5-201ENSMUST00000078271 Neurod1Q60867 357 aa14.7□□□□□ -0.06
Pcdhb5-201ENSMUST00000078271 Lmo7E9PYF4 1699 aaKnown RBP14.69□□□□□ -0.06
Pcdhb5-201ENSMUST00000078271 Samd9lQ69Z37 1561 aa14.69□□□□□ -0.06
Pcdhb5-201ENSMUST00000078271 AqrQ8CFQ3 1481 aaKnown RBP14.68□□□□□ -0.06
Pcdhb5-201ENSMUST00000078271 Plekhg3Q4VAC9 1341 aa14.68□□□□□ -0.06
Pcdhb5-201ENSMUST00000078271 Las1lA2BE28 776 aaKnown RBP14.67□□□□□ -0.06
Pcdhb5-201ENSMUST00000078271 Eea1Q8BL66 1411 aa14.66□□□□□ -0.06
Pcdhb5-201ENSMUST00000078271 PogzQ8BZH4 1409 aaKnown RBP14.66□□□□□ -0.06
Pcdhb5-201ENSMUST00000078271 Pcf11G3X9Z4 1553 aa14.66□□□□□ -0.06
Pcdhb5-201ENSMUST00000078271 Tiam1Q60610 1591 aa14.66□□□□□ -0.06
Pcdhb5-201ENSMUST00000078271 Kdm5bQ80Y84 1544 aa14.65□□□□□ -0.06
Pcdhb5-201ENSMUST00000078271 Duox2A2AQ99 1517 aa14.65□□□□□ -0.06
Pcdhb5-201ENSMUST00000078271 Cux1P53564 1515 aa14.65□□□□□ -0.06
Pcdhb5-201ENSMUST00000078271 NefmP08553 848 aa14.65□□□□□ -0.06
Pcdhb5-201ENSMUST00000078271 Slx4Q6P1D7 1565 aa14.64□□□□□ -0.07
Pcdhb5-201ENSMUST00000078271 Ubl4bQ9CQ84 188 aa14.63□□□□□ -0.07
Pcdhb5-201ENSMUST00000078271 LrpprcQ6PB66 1392 aaKnown RBP14.63□□□□□ -0.07
Pcdhb5-201ENSMUST00000078271 Kif21aQ9QXL2 1672 aa14.63□□□□□ -0.07
Retrieved 100 of 22,080 RNA–protein pairs in 29.9 ms