RNA–Protein interactions for RNA: ENSMUST00000072040.6

Vrk1-202, Transcript of Serine/threonine-protein kinase VRK1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Vrk1, Length 1,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1-202ENSMUST00000072040 Gm35339A0A140LHH9 1649 aa39.35■■■■□ 3.89
Vrk1-202ENSMUST00000072040 NischQ80TM9 1593 aa39.26■■■■□ 3.88
Vrk1-202ENSMUST00000072040 Abcc9P70170 1546 aa38.21■■■■□ 3.71
Vrk1-202ENSMUST00000072040 Abcc8B2RUS7 1588 aa37.58■■■■□ 3.61
Vrk1-202ENSMUST00000072040 ScribQ80U72 1612 aa35.48■■■■□ 3.27
Vrk1-202ENSMUST00000072040 Dcaf1Q80TR8 1506 aa35.1■■■■□ 3.21
Vrk1-202ENSMUST00000072040 Rhox8Q6VSS7 320 aa35.02■■■■□ 3.2
Vrk1-202ENSMUST00000072040 Kdm5dQ62240 1548 aa34.61■■■■□ 3.13
Vrk1-202ENSMUST00000072040 NacadQ5SWP3 1504 aa34.52■■■■□ 3.12
Vrk1-202ENSMUST00000072040 Rtl1Q7M732 1744 aa34.44■■■■□ 3.1
Vrk1-202ENSMUST00000072040 Rb1cc1Q9ESK9 1588 aa34.37■■■■□ 3.09
Vrk1-202ENSMUST00000072040 Ccdc180J3QNE4 1664 aa34.31■■■■□ 3.08
Vrk1-202ENSMUST00000072040 Baz1aO88379 1555 aa34■■■■□ 3.03
Vrk1-202ENSMUST00000072040 Sycp2Q9CUU3 1500 aa33.78■■■■□ 3
Vrk1-202ENSMUST00000072040 Crybg2B7ZCC2 1516 aa33.66■■■□□ 2.98
Vrk1-202ENSMUST00000072040 Zcchc6Q5BLK4 1491 aaKnown RBP33.2■■■□□ 2.91
Vrk1-202ENSMUST00000072040 Smarca2Q6DIC0 1577 aa33.16■■■□□ 2.9
Vrk1-202ENSMUST00000072040 BicraF8VPZ9 1578 aa33.07■■■□□ 2.88
Vrk1-202ENSMUST00000072040 Ccdc136Q3TVA9 1136 aa32.49■■■□□ 2.79
Vrk1-202ENSMUST00000072040 Dnajc5bQ9CQ94 199 aa32.41■■■□□ 2.78
Vrk1-202ENSMUST00000072040 Cecr2E9Q2Z1 1453 aa32.33■■■□□ 2.77
Vrk1-202ENSMUST00000072040 Brd4Q9ESU6 1400 aaKnown RBP32.24■■■□□ 2.75
Vrk1-202ENSMUST00000072040 Pds5bQ4VA53 1446 aaKnown RBP32.21■■■□□ 2.75
Vrk1-202ENSMUST00000072040 Trim41Q5NCC3 630 aa32.2■■■□□ 2.74
Vrk1-202ENSMUST00000072040 Smarca4Q3TKT4 1613 aaKnown RBP32.16■■■□□ 2.74
Vrk1-202ENSMUST00000072040 Synj1Q8CHC4 1574 aa32.01■■■□□ 2.72
Vrk1-202ENSMUST00000072040 Cttnbp2B9EJA2 1648 aa31.97■■■□□ 2.71
Vrk1-202ENSMUST00000072040 CftrP26361 1476 aa31.93■■■□□ 2.7
Vrk1-202ENSMUST00000072040 Thoc2B1AZI6 1594 aaKnown RBP31.91■■■□□ 2.7
Vrk1-202ENSMUST00000072040 Atad2bE9Q166 1460 aaKnown RBP31.87■■■□□ 2.69
Vrk1-202ENSMUST00000072040 Iqgap2Q3UQ44 1575 aa31.78■■■□□ 2.68
Vrk1-202ENSMUST00000072040 HrcG5E8J6 738 aa31.75■■■□□ 2.67
Vrk1-202ENSMUST00000072040 Golga3P55937 1487 aa31.57■■■□□ 2.65
Vrk1-202ENSMUST00000072040 Ercc6F8VPZ5 1481 aa31.5■■■□□ 2.63
Vrk1-202ENSMUST00000072040 Top2bQ64511 1612 aa31.45■■■□□ 2.63
Vrk1-202ENSMUST00000072040 Cc2d2aQ8CFW7 1633 aa31.39■■■□□ 2.62
Vrk1-202ENSMUST00000072040 Wdr62Q3U3T8 1523 aa31.31■■■□□ 2.6
Vrk1-202ENSMUST00000072040 Esf1Q3V1V3 845 aaKnown RBP31.29■■■□□ 2.6
Vrk1-202ENSMUST00000072040 Cngb1E1AZ71 1325 aa31.26■■■□□ 2.6
Vrk1-202ENSMUST00000072040 Cep164Q5DU05 1446 aa31.24■■■□□ 2.59
Vrk1-202ENSMUST00000072040 Frmpd1A2AKB4 1549 aa31.19■■■□□ 2.58
Vrk1-202ENSMUST00000072040 Fam135aQ6NS59 1506 aa31.19■■■□□ 2.58
Vrk1-202ENSMUST00000072040 Rsf1E9PWW9 1441 aaKnown RBP31.07■■■□□ 2.56
Vrk1-202ENSMUST00000072040 Phldb1Q6PDH0 1371 aaKnown RBP31.01■■■□□ 2.55
Vrk1-202ENSMUST00000072040 Ccdc88bQ4QRL3 1481 aa30.99■■■□□ 2.55
Vrk1-202ENSMUST00000072040 Fmn1Q05860 1466 aa30.98■■■□□ 2.55
Vrk1-202ENSMUST00000072040 Unc13aQ4KUS2 1712 aa30.93■■■□□ 2.54
Vrk1-202ENSMUST00000072040 Baz1bQ9Z277 1479 aa30.9■■■□□ 2.54
Vrk1-202ENSMUST00000072040 TnnQ80Z71 1560 aa30.85■■■□□ 2.53
Vrk1-202ENSMUST00000072040 Chic1Q8CBW7 227 aa30.81■■■□□ 2.52
Vrk1-202ENSMUST00000072040 Lamc3Q9R0B6 1581 aa30.75■■■□□ 2.51
Vrk1-202ENSMUST00000072040 Ubl4bQ9CQ84 188 aa30.74■■■□□ 2.51
Vrk1-202ENSMUST00000072040 Top2aQ01320 1528 aaKnown RBP30.68■■■□□ 2.5
Vrk1-202ENSMUST00000072040 Mrc2Q64449 1479 aa30.49■■■□□ 2.47
Vrk1-202ENSMUST00000072040 Kif15Q6P9L6 1387 aa30.48■■■□□ 2.47
Vrk1-202ENSMUST00000072040 Camsap1A2AHC3 1581 aa30.35■■■□□ 2.45
Vrk1-202ENSMUST00000072040 Rapgef2Q8CHG7 1496 aa30.27■■■□□ 2.44
Vrk1-202ENSMUST00000072040 Gab3Q8BSM5 595 aa30.27■■■□□ 2.44
Vrk1-202ENSMUST00000072040 Ccdc18Q640L5 1455 aa30.25■■■□□ 2.43
Vrk1-202ENSMUST00000072040 Cux2P70298 1426 aa30.17■■■□□ 2.42
Vrk1-202ENSMUST00000072040 NrkQ9R0G8 1455 aa30.05■■■□□ 2.4
Vrk1-202ENSMUST00000072040 Grin2bQ01097 1482 aa30.02■■■□□ 2.4
Vrk1-202ENSMUST00000072040 Eif4g1Q6NZJ6 1600 aaKnown RBP30.02■■■□□ 2.4
Vrk1-202ENSMUST00000072040 Shroom4Q1W617 1475 aa29.97■■■□□ 2.39
Vrk1-202ENSMUST00000072040 Cep162Q6ZQ06 1403 aa29.97■■■□□ 2.39
Vrk1-202ENSMUST00000072040 Il27Q8K3I6 234 aa29.9■■■□□ 2.38
Vrk1-202ENSMUST00000072040 Npm1Q61937 292 aaKnown RBP29.87■■■□□ 2.37
Vrk1-202ENSMUST00000072040 PtprkP35822 1457 aa29.85■■■□□ 2.37
Vrk1-202ENSMUST00000072040 LrpprcQ6PB66 1392 aaKnown RBP29.82■■■□□ 2.36
Vrk1-202ENSMUST00000072040 Npm2Q80W85 207 aa29.8■■■□□ 2.36
Vrk1-202ENSMUST00000072040 PogzQ8BZH4 1409 aaKnown RBP29.8■■■□□ 2.36
Vrk1-202ENSMUST00000072040 Map3k1P53349 1493 aa29.76■■■□□ 2.35
Vrk1-202ENSMUST00000072040 Lrriq1Q0P5X1 1673 aa29.74■■■□□ 2.35
Vrk1-202ENSMUST00000072040 Arhgap35Q91YM2 1499 aa29.74■■■□□ 2.35
Vrk1-202ENSMUST00000072040 Kif21aQ9QXL2 1672 aa29.73■■■□□ 2.35
Vrk1-202ENSMUST00000072040 Efcab5A0JP43 1406 aa29.72■■■□□ 2.35
Vrk1-202ENSMUST00000072040 Duox2A2AQ99 1517 aa29.67■■■□□ 2.34
Vrk1-202ENSMUST00000072040 Dhx29Q6PGC1 1365 aaKnown RBP29.64■■■□□ 2.34
Vrk1-202ENSMUST00000072040 Crocc2F6XLV1 1638 aa29.62■■■□□ 2.33
Vrk1-202ENSMUST00000072040 Mroh2bQ7M6Y6 1581 aa29.6■■■□□ 2.33
Vrk1-202ENSMUST00000072040 AqrQ8CFQ3 1481 aaKnown RBP29.57■■■□□ 2.32
Vrk1-202ENSMUST00000072040 Ehmt2Q9Z148 1263 aaKnown RBP29.56■■■□□ 2.32
Vrk1-202ENSMUST00000072040 Samd9lQ69Z37 1561 aa29.52■■■□□ 2.32
Vrk1-202ENSMUST00000072040 Dnajc5P60904 198 aa29.5■■■□□ 2.31
Vrk1-202ENSMUST00000072040 Myt1lP97500 1187 aa29.47■■■□□ 2.31
Vrk1-202ENSMUST00000072040 SynmQ70IV5 1561 aa29.44■■■□□ 2.3
Vrk1-202ENSMUST00000072040 Rpgrip1Q9EPQ2 1331 aa29.43■■■□□ 2.3
Vrk1-202ENSMUST00000072040 Clip1Q922J3 1391 aa29.4■■■□□ 2.3
Vrk1-202ENSMUST00000072040 Acin1Q9JIX8 1338 aaKnown RBP29.39■■■□□ 2.3
Vrk1-202ENSMUST00000072040 Eif4g3Q80XI3 1579 aaKnown RBP29.34■■■□□ 2.29
Vrk1-202ENSMUST00000072040 Zeb1Q64318 1117 aa29.34■■■□□ 2.29
Vrk1-202ENSMUST00000072040 Carmil1Q6EDY6 1374 aa29.33■■■□□ 2.29
Vrk1-202ENSMUST00000072040 Erich3F6QRE9 1637 aa29.3■■■□□ 2.28
Vrk1-202ENSMUST00000072040 Eea1Q8BL66 1411 aa29.28■■■□□ 2.28
Vrk1-202ENSMUST00000072040 Urb2E9Q7L1 1524 aaKnown RBP29.27■■■□□ 2.28
Vrk1-202ENSMUST00000072040 Plb1Q3TTY0 1478 aa29.26■■■□□ 2.27
Vrk1-202ENSMUST00000072040 Gpatch8A2A6A1 1505 aa29.23■■■□□ 2.27
Vrk1-202ENSMUST00000072040 Polr1aO35134 1717 aaKnown RBP29.23■■■□□ 2.27
Vrk1-202ENSMUST00000072040 Ankrd26Q811D2 1581 aa29.22■■■□□ 2.27
Vrk1-202ENSMUST00000072040 Pbrm1Q8BSQ9 1634 aaKnown RBP29.22■■■□□ 2.27
Retrieved 100 of 22,080 RNA–protein pairs in 12.6 ms