RNA–Protein interactions for RNA: ENSMUST00000068439.12

Pdlim1-201, Transcript of PDZ and LIM domain protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pdlim1, Length 2,571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1-201ENSMUST00000068439 NischQ80TM9 1593 aa32.6■■■□□ 2.81
Pdlim1-201ENSMUST00000068439 Gm35339A0A140LHH9 1649 aa32.57■■■□□ 2.8
Pdlim1-201ENSMUST00000068439 Abcc9P70170 1546 aa31.66■■■□□ 2.66
Pdlim1-201ENSMUST00000068439 Abcc8B2RUS7 1588 aa31.22■■■□□ 2.59
Pdlim1-201ENSMUST00000068439 ScribQ80U72 1612 aa29.49■■■□□ 2.31
Pdlim1-201ENSMUST00000068439 Rhox8Q6VSS7 320 aa29.16■■■□□ 2.26
Pdlim1-201ENSMUST00000068439 Dcaf1Q80TR8 1506 aa29.05■■■□□ 2.24
Pdlim1-201ENSMUST00000068439 Kdm5dQ62240 1548 aa28.76■■■□□ 2.2
Pdlim1-201ENSMUST00000068439 NacadQ5SWP3 1504 aa28.68■■■□□ 2.18
Pdlim1-201ENSMUST00000068439 Rb1cc1Q9ESK9 1588 aa28.5■■■□□ 2.15
Pdlim1-201ENSMUST00000068439 Ccdc180J3QNE4 1664 aa28.29■■■□□ 2.12
Pdlim1-201ENSMUST00000068439 Rtl1Q7M732 1744 aa28.25■■■□□ 2.11
Pdlim1-201ENSMUST00000068439 Baz1aO88379 1555 aa28.17■■■□□ 2.1
Pdlim1-201ENSMUST00000068439 Sycp2Q9CUU3 1500 aa28.08■■■□□ 2.09
Pdlim1-201ENSMUST00000068439 Crybg2B7ZCC2 1516 aa27.9■■■□□ 2.06
Pdlim1-201ENSMUST00000068439 Zcchc6Q5BLK4 1491 aaKnown RBP27.57■■■□□ 2
Pdlim1-201ENSMUST00000068439 BicraF8VPZ9 1578 aa27.53■■■□□ 2
Pdlim1-201ENSMUST00000068439 Smarca2Q6DIC0 1577 aa27.47■■□□□ 1.99
Pdlim1-201ENSMUST00000068439 Ccdc136Q3TVA9 1136 aa27.13■■□□□ 1.93
Pdlim1-201ENSMUST00000068439 Cecr2E9Q2Z1 1453 aa26.95■■□□□ 1.9
Pdlim1-201ENSMUST00000068439 Trim41Q5NCC3 630 aa26.76■■□□□ 1.87
Pdlim1-201ENSMUST00000068439 Brd4Q9ESU6 1400 aaKnown RBP26.75■■□□□ 1.87
Pdlim1-201ENSMUST00000068439 Smarca4Q3TKT4 1613 aaKnown RBP26.69■■□□□ 1.86
Pdlim1-201ENSMUST00000068439 Synj1Q8CHC4 1574 aa26.58■■□□□ 1.85
Pdlim1-201ENSMUST00000068439 CftrP26361 1476 aa26.53■■□□□ 1.84
Pdlim1-201ENSMUST00000068439 Pds5bQ4VA53 1446 aaKnown RBP26.52■■□□□ 1.84
Pdlim1-201ENSMUST00000068439 Atad2bE9Q166 1460 aaKnown RBP26.49■■□□□ 1.83
Pdlim1-201ENSMUST00000068439 Cttnbp2B9EJA2 1648 aa26.46■■□□□ 1.83
Pdlim1-201ENSMUST00000068439 Iqgap2Q3UQ44 1575 aa26.4■■□□□ 1.82
Pdlim1-201ENSMUST00000068439 HrcG5E8J6 738 aa26.31■■□□□ 1.8
Pdlim1-201ENSMUST00000068439 Golga3P55937 1487 aa26.18■■□□□ 1.78
Pdlim1-201ENSMUST00000068439 Esf1Q3V1V3 845 aaKnown RBP26.09■■□□□ 1.77
Pdlim1-201ENSMUST00000068439 Cngb1E1AZ71 1325 aa26.04■■□□□ 1.76
Pdlim1-201ENSMUST00000068439 Top2bQ64511 1612 aa26.03■■□□□ 1.76
Pdlim1-201ENSMUST00000068439 Wdr62Q3U3T8 1523 aa26.01■■□□□ 1.75
Pdlim1-201ENSMUST00000068439 Ercc6F8VPZ5 1481 aa25.98■■□□□ 1.75
Pdlim1-201ENSMUST00000068439 Frmpd1A2AKB4 1549 aa25.98■■□□□ 1.75
Pdlim1-201ENSMUST00000068439 Thoc2B1AZI6 1594 aaKnown RBP25.91■■□□□ 1.74
Pdlim1-201ENSMUST00000068439 Cep164Q5DU05 1446 aa25.83■■□□□ 1.73
Pdlim1-201ENSMUST00000068439 Rsf1E9PWW9 1441 aaKnown RBP25.81■■□□□ 1.72
Pdlim1-201ENSMUST00000068439 Ccdc88bQ4QRL3 1481 aa25.77■■□□□ 1.72
Pdlim1-201ENSMUST00000068439 Cc2d2aQ8CFW7 1633 aa25.73■■□□□ 1.71
Pdlim1-201ENSMUST00000068439 Chic1Q8CBW7 227 aa25.7■■□□□ 1.71
Pdlim1-201ENSMUST00000068439 Fmn1Q05860 1466 aa25.67■■□□□ 1.7
Pdlim1-201ENSMUST00000068439 Unc13aQ4KUS2 1712 aa25.67■■□□□ 1.7
Pdlim1-201ENSMUST00000068439 Phldb1Q6PDH0 1371 aaKnown RBP25.57■■□□□ 1.68
Pdlim1-201ENSMUST00000068439 TnnQ80Z71 1560 aa25.55■■□□□ 1.68
Pdlim1-201ENSMUST00000068439 Fam135aQ6NS59 1506 aa25.54■■□□□ 1.68
Pdlim1-201ENSMUST00000068439 Lamc3Q9R0B6 1581 aa25.51■■□□□ 1.67
Pdlim1-201ENSMUST00000068439 Top2aQ01320 1528 aaKnown RBP25.41■■□□□ 1.66
Pdlim1-201ENSMUST00000068439 Kif15Q6P9L6 1387 aa25.39■■□□□ 1.65
Pdlim1-201ENSMUST00000068439 Ubl4bQ9CQ84 188 aa25.28■■□□□ 1.64
Pdlim1-201ENSMUST00000068439 Baz1bQ9Z277 1479 aa25.24■■□□□ 1.63
Pdlim1-201ENSMUST00000068439 Gab3Q8BSM5 595 aa25.23■■□□□ 1.63
Pdlim1-201ENSMUST00000068439 Dnajc5bQ9CQ94 199 aa25.23■■□□□ 1.63
Pdlim1-201ENSMUST00000068439 Camsap1A2AHC3 1581 aa25.17■■□□□ 1.62
Pdlim1-201ENSMUST00000068439 Cux2P70298 1426 aa25.14■■□□□ 1.61
Pdlim1-201ENSMUST00000068439 Ccdc18Q640L5 1455 aa25.11■■□□□ 1.61
Pdlim1-201ENSMUST00000068439 Rapgef2Q8CHG7 1496 aa25.08■■□□□ 1.61
Pdlim1-201ENSMUST00000068439 Il27Q8K3I6 234 aa25■■□□□ 1.59
Pdlim1-201ENSMUST00000068439 Mrc2Q64449 1479 aa24.94■■□□□ 1.58
Pdlim1-201ENSMUST00000068439 Grin2bQ01097 1482 aa24.94■■□□□ 1.58
Pdlim1-201ENSMUST00000068439 Npm1Q61937 292 aaKnown RBP24.93■■□□□ 1.58
Pdlim1-201ENSMUST00000068439 NrkQ9R0G8 1455 aa24.92■■□□□ 1.58
Pdlim1-201ENSMUST00000068439 Cep162Q6ZQ06 1403 aa24.87■■□□□ 1.57
Pdlim1-201ENSMUST00000068439 PtprkP35822 1457 aa24.86■■□□□ 1.57
Pdlim1-201ENSMUST00000068439 Shroom4Q1W617 1475 aa24.85■■□□□ 1.57
Pdlim1-201ENSMUST00000068439 LrpprcQ6PB66 1392 aaKnown RBP24.83■■□□□ 1.57
Pdlim1-201ENSMUST00000068439 Eif4g1Q6NZJ6 1600 aaKnown RBP24.83■■□□□ 1.56
Pdlim1-201ENSMUST00000068439 Npm2Q80W85 207 aa24.8■■□□□ 1.56
Pdlim1-201ENSMUST00000068439 PogzQ8BZH4 1409 aaKnown RBP24.77■■□□□ 1.56
Pdlim1-201ENSMUST00000068439 Kif21aQ9QXL2 1672 aa24.71■■□□□ 1.55
Pdlim1-201ENSMUST00000068439 Efcab5A0JP43 1406 aa24.7■■□□□ 1.55
Pdlim1-201ENSMUST00000068439 Arhgap35Q91YM2 1499 aa24.69■■□□□ 1.54
Pdlim1-201ENSMUST00000068439 Dhx29Q6PGC1 1365 aaKnown RBP24.69■■□□□ 1.54
Pdlim1-201ENSMUST00000068439 Duox2A2AQ99 1517 aa24.69■■□□□ 1.54
Pdlim1-201ENSMUST00000068439 Map3k1P53349 1493 aa24.62■■□□□ 1.53
Pdlim1-201ENSMUST00000068439 Ehmt2Q9Z148 1263 aaKnown RBP24.61■■□□□ 1.53
Pdlim1-201ENSMUST00000068439 Crocc2F6XLV1 1638 aa24.58■■□□□ 1.52
Pdlim1-201ENSMUST00000068439 Mroh2bQ7M6Y6 1581 aa24.58■■□□□ 1.52
Pdlim1-201ENSMUST00000068439 Myt1lP97500 1187 aa24.57■■□□□ 1.52
Pdlim1-201ENSMUST00000068439 Samd9lQ69Z37 1561 aa24.51■■□□□ 1.51
Pdlim1-201ENSMUST00000068439 AqrQ8CFQ3 1481 aaKnown RBP24.45■■□□□ 1.5
Pdlim1-201ENSMUST00000068439 Zeb1Q64318 1117 aa24.45■■□□□ 1.5
Pdlim1-201ENSMUST00000068439 Clip1Q922J3 1391 aa24.42■■□□□ 1.5
Pdlim1-201ENSMUST00000068439 SynmQ70IV5 1561 aa24.41■■□□□ 1.5
Pdlim1-201ENSMUST00000068439 Plb1Q3TTY0 1478 aa24.4■■□□□ 1.5
Pdlim1-201ENSMUST00000068439 Urb2E9Q7L1 1524 aaKnown RBP24.37■■□□□ 1.49
Pdlim1-201ENSMUST00000068439 Carmil1Q6EDY6 1374 aa24.34■■□□□ 1.49
Pdlim1-201ENSMUST00000068439 Lrriq1Q0P5X1 1673 aa24.33■■□□□ 1.49
Pdlim1-201ENSMUST00000068439 Rad54l2Q99NG0 1466 aa24.32■■□□□ 1.48
Pdlim1-201ENSMUST00000068439 Eea1Q8BL66 1411 aa24.28■■□□□ 1.48
Pdlim1-201ENSMUST00000068439 Disp1Q3TDN0 1521 aa24.25■■□□□ 1.47
Pdlim1-201ENSMUST00000068439 Ift140E9PY46 1464 aa24.24■■□□□ 1.47
Pdlim1-201ENSMUST00000068439 Acin1Q9JIX8 1338 aaKnown RBP24.24■■□□□ 1.47
Pdlim1-201ENSMUST00000068439 Magi3Q9EQJ9 1476 aa24.23■■□□□ 1.47
Pdlim1-201ENSMUST00000068439 Ankrd26Q811D2 1581 aa24.21■■□□□ 1.47
Pdlim1-201ENSMUST00000068439 Pla2r1Q62028 1487 aa24.2■■□□□ 1.47
Pdlim1-201ENSMUST00000068439 Setd5Q5XJV7 1441 aa24.2■■□□□ 1.46
Pdlim1-201ENSMUST00000068439 Erich3F6QRE9 1637 aa24.19■■□□□ 1.46
Retrieved 100 of 22,080 RNA–protein pairs in 9.7 ms