RNA–Protein interactions for RNA: ENSMUST00000068056.11

Ddx39b-201, Transcript of Spliceosome RNA helicase Ddx39b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx39b, Length 1,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39b-201ENSMUST00000068056 Gm35339A0A140LHH9 1649 aa41.34■■■■■ 4.21
Ddx39b-201ENSMUST00000068056 NischQ80TM9 1593 aa40.85■■■■■ 4.13
Ddx39b-201ENSMUST00000068056 Abcc9P70170 1546 aa39.51■■■■□ 3.91
Ddx39b-201ENSMUST00000068056 Abcc8B2RUS7 1588 aa39.47■■■■□ 3.91
Ddx39b-201ENSMUST00000068056 ScribQ80U72 1612 aa38.11■■■■□ 3.69
Ddx39b-201ENSMUST00000068056 NacadQ5SWP3 1504 aa36.88■■■■□ 3.49
Ddx39b-201ENSMUST00000068056 Kdm5dQ62240 1548 aa36.85■■■■□ 3.49
Ddx39b-201ENSMUST00000068056 Dcaf1Q80TR8 1506 aa36.24■■■■□ 3.39
Ddx39b-201ENSMUST00000068056 Sycp2Q9CUU3 1500 aa36.16■■■■□ 3.38
Ddx39b-201ENSMUST00000068056 BicraF8VPZ9 1578 aa35.69■■■■□ 3.3
Ddx39b-201ENSMUST00000068056 Rb1cc1Q9ESK9 1588 aa35.64■■■■□ 3.3
Ddx39b-201ENSMUST00000068056 Rhox8Q6VSS7 320 aa35.4■■■■□ 3.26
Ddx39b-201ENSMUST00000068056 Dnajc5bQ9CQ94 199 aa35.2■■■■□ 3.23
Ddx39b-201ENSMUST00000068056 Baz1aO88379 1555 aa35.09■■■■□ 3.21
Ddx39b-201ENSMUST00000068056 Ccdc180J3QNE4 1664 aa35.01■■■■□ 3.2
Ddx39b-201ENSMUST00000068056 Crybg2B7ZCC2 1516 aa34.88■■■■□ 3.17
Ddx39b-201ENSMUST00000068056 Pds5bQ4VA53 1446 aaKnown RBP34.67■■■■□ 3.14
Ddx39b-201ENSMUST00000068056 Zcchc6Q5BLK4 1491 aaKnown RBP34.66■■■■□ 3.14
Ddx39b-201ENSMUST00000068056 Thoc2B1AZI6 1594 aaKnown RBP34.4■■■■□ 3.1
Ddx39b-201ENSMUST00000068056 Atad2bE9Q166 1460 aaKnown RBP34.34■■■■□ 3.09
Ddx39b-201ENSMUST00000068056 Smarca4Q3TKT4 1613 aaKnown RBP34.08■■■■□ 3.05
Ddx39b-201ENSMUST00000068056 Smarca2Q6DIC0 1577 aa34.05■■■■□ 3.04
Ddx39b-201ENSMUST00000068056 Cecr2E9Q2Z1 1453 aa34■■■■□ 3.03
Ddx39b-201ENSMUST00000068056 Ercc6F8VPZ5 1481 aa33.99■■■■□ 3.03
Ddx39b-201ENSMUST00000068056 Iqgap2Q3UQ44 1575 aa33.91■■■■□ 3.02
Ddx39b-201ENSMUST00000068056 Cc2d2aQ8CFW7 1633 aa33.9■■■■□ 3.02
Ddx39b-201ENSMUST00000068056 Fam135aQ6NS59 1506 aa33.6■■■□□ 2.97
Ddx39b-201ENSMUST00000068056 Wdr62Q3U3T8 1523 aa33.6■■■□□ 2.97
Ddx39b-201ENSMUST00000068056 Rtl1Q7M732 1744 aa33.57■■■□□ 2.96
Ddx39b-201ENSMUST00000068056 Frmpd1A2AKB4 1549 aa33.56■■■□□ 2.96
Ddx39b-201ENSMUST00000068056 Phldb1Q6PDH0 1371 aaKnown RBP33.38■■■□□ 2.93
Ddx39b-201ENSMUST00000068056 CftrP26361 1476 aa33.19■■■□□ 2.9
Ddx39b-201ENSMUST00000068056 Cttnbp2B9EJA2 1648 aa33.18■■■□□ 2.9
Ddx39b-201ENSMUST00000068056 Synj1Q8CHC4 1574 aa33.15■■■□□ 2.9
Ddx39b-201ENSMUST00000068056 Unc13aQ4KUS2 1712 aa33.14■■■□□ 2.9
Ddx39b-201ENSMUST00000068056 Ccdc136Q3TVA9 1136 aa33.14■■■□□ 2.9
Ddx39b-201ENSMUST00000068056 Ubl4bQ9CQ84 188 aa33.13■■■□□ 2.89
Ddx39b-201ENSMUST00000068056 Baz1bQ9Z277 1479 aa33.13■■■□□ 2.89
Ddx39b-201ENSMUST00000068056 Brd4Q9ESU6 1400 aaKnown RBP33.11■■■□□ 2.89
Ddx39b-201ENSMUST00000068056 Mrc2Q64449 1479 aa32.85■■■□□ 2.85
Ddx39b-201ENSMUST00000068056 Esf1Q3V1V3 845 aaKnown RBP32.71■■■□□ 2.83
Ddx39b-201ENSMUST00000068056 Trim41Q5NCC3 630 aa32.54■■■□□ 2.8
Ddx39b-201ENSMUST00000068056 Rsf1E9PWW9 1441 aaKnown RBP32.44■■■□□ 2.78
Ddx39b-201ENSMUST00000068056 Kif15Q6P9L6 1387 aa32.4■■■□□ 2.78
Ddx39b-201ENSMUST00000068056 Cux2P70298 1426 aa32.37■■■□□ 2.77
Ddx39b-201ENSMUST00000068056 Lamc3Q9R0B6 1581 aa32.22■■■□□ 2.75
Ddx39b-201ENSMUST00000068056 Dnajc5P60904 198 aa32.21■■■□□ 2.75
Ddx39b-201ENSMUST00000068056 Lrriq1Q0P5X1 1673 aa32.17■■■□□ 2.74
Ddx39b-201ENSMUST00000068056 Kif21aQ9QXL2 1672 aa32.14■■■□□ 2.74
Ddx39b-201ENSMUST00000068056 Npm1Q61937 292 aaKnown RBP32.06■■■□□ 2.72
Ddx39b-201ENSMUST00000068056 Golga3P55937 1487 aa31.94■■■□□ 2.7
Ddx39b-201ENSMUST00000068056 Cngb1E1AZ71 1325 aa31.93■■■□□ 2.7
Ddx39b-201ENSMUST00000068056 Cep164Q5DU05 1446 aa31.91■■■□□ 2.7
Ddx39b-201ENSMUST00000068056 Top2bQ64511 1612 aa31.91■■■□□ 2.7
Ddx39b-201ENSMUST00000068056 TnnQ80Z71 1560 aa31.85■■■□□ 2.69
Ddx39b-201ENSMUST00000068056 Il27Q8K3I6 234 aa31.82■■■□□ 2.68
Ddx39b-201ENSMUST00000068056 Ccdc18Q640L5 1455 aa31.79■■■□□ 2.68
Ddx39b-201ENSMUST00000068056 Eif4g3Q80XI3 1579 aaKnown RBP31.69■■■□□ 2.66
Ddx39b-201ENSMUST00000068056 Dhx29Q6PGC1 1365 aaKnown RBP31.68■■■□□ 2.66
Ddx39b-201ENSMUST00000068056 Camsap1A2AHC3 1581 aa31.67■■■□□ 2.66
Ddx39b-201ENSMUST00000068056 Urb2E9Q7L1 1524 aaKnown RBP31.61■■■□□ 2.65
Ddx39b-201ENSMUST00000068056 LrpprcQ6PB66 1392 aaKnown RBP31.61■■■□□ 2.65
Ddx39b-201ENSMUST00000068056 Fmn1Q05860 1466 aa31.58■■■□□ 2.65
Ddx39b-201ENSMUST00000068056 Plb1Q3TTY0 1478 aa31.58■■■□□ 2.65
Ddx39b-201ENSMUST00000068056 Crocc2F6XLV1 1638 aa31.54■■■□□ 2.64
Ddx39b-201ENSMUST00000068056 PogzQ8BZH4 1409 aaKnown RBP31.41■■■□□ 2.62
Ddx39b-201ENSMUST00000068056 Shroom2A2ALU4 1481 aa31.31■■■□□ 2.6
Ddx39b-201ENSMUST00000068056 Duox2A2AQ99 1517 aa31.29■■■□□ 2.6
Ddx39b-201ENSMUST00000068056 Ift140E9PY46 1464 aa31.27■■■□□ 2.6
Ddx39b-201ENSMUST00000068056 Grin2bQ01097 1482 aa31.23■■■□□ 2.59
Ddx39b-201ENSMUST00000068056 Rusc2Q80U22 1514 aa31.18■■■□□ 2.58
Ddx39b-201ENSMUST00000068056 Ccdc88bQ4QRL3 1481 aa31.11■■■□□ 2.57
Ddx39b-201ENSMUST00000068056 Samd9lQ69Z37 1561 aa31.06■■■□□ 2.56
Ddx39b-201ENSMUST00000068056 Disp1Q3TDN0 1521 aa31.06■■■□□ 2.56
Ddx39b-201ENSMUST00000068056 Col17a1Q07563 1470 aa31.04■■■□□ 2.56
Ddx39b-201ENSMUST00000068056 Pabpn1Q8CCS6 302 aaKnown RBP31.01■■■□□ 2.56
Ddx39b-201ENSMUST00000068056 Efcab5A0JP43 1406 aa31■■■□□ 2.55
Ddx39b-201ENSMUST00000068056 Top2aQ01320 1528 aaKnown RBP30.97■■■□□ 2.55
Ddx39b-201ENSMUST00000068056 Setd1bQ8CFT2 1985 aa30.96■■■□□ 2.55
Ddx39b-201ENSMUST00000068056 Pbrm1Q8BSQ9 1634 aaKnown RBP30.92■■■□□ 2.54
Ddx39b-201ENSMUST00000068056 Pelp1Q9DBD5 1123 aaKnown RBP30.92■■■□□ 2.54
Ddx39b-201ENSMUST00000068056 Nup160Q9Z0W3 1402 aaKnown RBP30.9■■■□□ 2.54
Ddx39b-201ENSMUST00000068056 Chic1Q8CBW7 227 aa30.9■■■□□ 2.54
Ddx39b-201ENSMUST00000068056 Rad54l2Q99NG0 1466 aa30.87■■■□□ 2.53
Ddx39b-201ENSMUST00000068056 Cc2d2bA0A286YDU8 1405 aa30.86■■■□□ 2.53
Ddx39b-201ENSMUST00000068056 NrkQ9R0G8 1455 aa30.85■■■□□ 2.53
Ddx39b-201ENSMUST00000068056 Grin2aP35436 1464 aa30.76■■■□□ 2.52
Ddx39b-201ENSMUST00000068056 Magi3Q9EQJ9 1476 aa30.74■■■□□ 2.51
Ddx39b-201ENSMUST00000068056 Shroom4Q1W617 1475 aa30.74■■■□□ 2.51
Ddx39b-201ENSMUST00000068056 PtprkP35822 1457 aa30.73■■■□□ 2.51
Ddx39b-201ENSMUST00000068056 AqrQ8CFQ3 1481 aaKnown RBP30.67■■■□□ 2.5
Ddx39b-201ENSMUST00000068056 SynmQ70IV5 1561 aa30.59■■■□□ 2.49
Ddx39b-201ENSMUST00000068056 Zeb1Q64318 1117 aa30.59■■■□□ 2.49
Ddx39b-201ENSMUST00000068056 Pla2r1Q62028 1487 aa30.57■■■□□ 2.48
Ddx39b-201ENSMUST00000068056 Fgd6Q69ZL1 1399 aa30.56■■■□□ 2.48
Ddx39b-201ENSMUST00000068056 Zcchc11B2RX14 1644 aaKnown RBP30.55■■■□□ 2.48
Ddx39b-201ENSMUST00000068056 Gpatch8A2A6A1 1505 aa30.46■■■□□ 2.47
Ddx39b-201ENSMUST00000068056 Npm2Q80W85 207 aa30.43■■■□□ 2.46
Ddx39b-201ENSMUST00000068056 AknaQ80VW7 1404 aa30.41■■■□□ 2.46
Ddx39b-201ENSMUST00000068056 Gapvd1Q6PAR5 1458 aa30.33■■■□□ 2.45
Retrieved 100 of 22,080 RNA–protein pairs in 50 ms